RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 GAGE12HA6NDE8 117 aa12.09□□□□□ -0.47
GPN1-212ENST00000616939 TMEM8BA6NDV4 472 aa12.09□□□□□ -0.47
GPN1-212ENST00000616939 C12orf74Q32Q52 190 aa12.09□□□□□ -0.47
GPN1-212ENST00000616939 C21orf62Q9NYP8 219 aa12.09□□□□□ -0.47
GPN1-212ENST00000616939 MSRB1Q9NZV6 116 aa12.09□□□□□ -0.47
GPN1-212ENST00000616939 SELENOKQ9Y6D0 94 aa12.09□□□□□ -0.47
GPN1-212ENST00000616939 SMAD5-AS1Q9Y6J3 95 aa12.09□□□□□ -0.47
GPN1-212ENST00000616939 TRAV12-1A0A0B4J245 112 aa12.08□□□□□ -0.48
GPN1-212ENST00000616939 ORM1P02763 201 aa12.08□□□□□ -0.48
GPN1-212ENST00000616939 PLNP26678 52 aa12.08□□□□□ -0.48
GPN1-212ENST00000616939 CLEC2AQ6UVW9 174 aa12.08□□□□□ -0.48
GPN1-212ENST00000616939 Q8TAT8 98 aa12.08□□□□□ -0.48
GPN1-212ENST00000616939 TTTY13Q9BZ97 58 aa12.08□□□□□ -0.48
GPN1-212ENST00000616939 TSSC4Q9Y5U2 329 aaPredicted RBP12.08□□□□□ -0.48
GPN1-212ENST00000616939 TRIOBPQ9H2D6 2365 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 TRBV7-3A0A075B6L6 115 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 E7EQL1 145 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 RAB9AP51151 201 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 RRN3P1Q2M238 152 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 C5orf64Q2M2E5 130 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 LY6G5BQ8NDX9 201 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 MYOZ3Q8TDC0 251 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 A0A1B0GV72 72 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 B9A039 149 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 GAS8-AS1O95177 125 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 DLX1P56177 255 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 LAGE3Q14657 143 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 DTX2Q86UW9 622 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 OR11H6Q8NGC7 330 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 DPM3Q9P2X0 92 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 PRO0461Q9UI25 63 aa12.07□□□□□ -0.48
GPN1-212ENST00000616939 IGHV4-4A0A075B6R2 117 aa12.06□□□□□ -0.48
GPN1-212ENST00000616939 PRB4P10163 310 aaPredicted RBP12.06□□□□□ -0.48
GPN1-212ENST00000616939 NRACQ8N912 160 aa12.06□□□□□ -0.48
GPN1-212ENST00000616939 MRPL35Q9NZE8 188 aaKnown RBP12.06□□□□□ -0.48
GPN1-212ENST00000616939 ABCA1O95477 2261 aa12.06□□□□□ -0.48
GPN1-212ENST00000616939 WFDC2Q14508 124 aa12.05□□□□□ -0.48
GPN1-212ENST00000616939 MAPKAPK5-AS1Q8N8E1 139 aa12.05□□□□□ -0.48
GPN1-212ENST00000616939 SLC50A1Q9BRV3 221 aa12.05□□□□□ -0.48
GPN1-212ENST00000616939 GTSF1LQ9H1H1 148 aa12.05□□□□□ -0.48
GPN1-212ENST00000616939 GPR179Q6PRD1 2367 aa12.05□□□□□ -0.48
GPN1-212ENST00000616939 TRAV40A0A0B4J280 105 aa12.04□□□□□ -0.48
GPN1-212ENST00000616939 ATP6V0E2Q8NHE4 81 aa12.04□□□□□ -0.48
GPN1-212ENST00000616939 MRPL53Q96EL3 112 aaKnown RBP12.04□□□□□ -0.48
GPN1-212ENST00000616939 KLK9Q2XQG4 91 aa12.04□□□□□ -0.48
GPN1-212ENST00000616939 GAGE13Q4V321 117 aa12.04□□□□□ -0.48
GPN1-212ENST00000616939 TCTEX1D4Q5JR98 221 aa12.04□□□□□ -0.48
GPN1-212ENST00000616939 DYNAPQ8N1N2 210 aa12.04□□□□□ -0.48
GPN1-212ENST00000616939 ATP6V0BQ99437 205 aa12.04□□□□□ -0.48
GPN1-212ENST00000616939 TMEM160Q9NX00 188 aa12.04□□□□□ -0.48
GPN1-212ENST00000616939 KLK9Q9UKQ9 250 aa12.04□□□□□ -0.48
GPN1-212ENST00000616939 NCBP2LA6PVI3 153 aaKnown RBP12.03□□□□□ -0.48
GPN1-212ENST00000616939 ODF3BA8MYP8 253 aa12.03□□□□□ -0.48
GPN1-212ENST00000616939 PRRG2O14669 202 aa12.03□□□□□ -0.48
GPN1-212ENST00000616939 CTSGP08311 255 aa12.03□□□□□ -0.48
GPN1-212ENST00000616939 GATA1P15976 413 aaPredicted RBP12.03□□□□□ -0.48
GPN1-212ENST00000616939 SLC25A16P16260 332 aa12.03□□□□□ -0.48
GPN1-212ENST00000616939 SPAG8Q99932 426 aaPredicted RBP12.03□□□□□ -0.48
GPN1-212ENST00000616939 F8VRH5 84 aa12.02□□□□□ -0.48
GPN1-212ENST00000616939 H7C1H1 209 aa12.02□□□□□ -0.48
GPN1-212ENST00000616939 HLA-DMBP28068 263 aa12.02□□□□□ -0.48
GPN1-212ENST00000616939 PRB3Q04118 309 aaPredicted RBP12.02□□□□□ -0.48
GPN1-212ENST00000616939 MRAP2Q96G30 205 aa12.02□□□□□ -0.48
GPN1-212ENST00000616939 HIF1ANQ9NWT6 349 aa12.02□□□□□ -0.48
GPN1-212ENST00000616939 S4R3C0 116 aa12.02□□□□□ -0.48
GPN1-212ENST00000616939 IGKV3D-20A0A0C4DH25 116 aa12.02□□□□□ -0.49
GPN1-212ENST00000616939 SMAGPQ0VAQ4 97 aa12.02□□□□□ -0.49
GPN1-212ENST00000616939 HIST1H4GQ99525 98 aa12.02□□□□□ -0.49
GPN1-212ENST00000616939 K7EMI3 77 aa12.01□□□□□ -0.49
GPN1-212ENST00000616939 M0R1W7 72 aa12.01□□□□□ -0.49
GPN1-212ENST00000616939 LCNL1Q6ZST4 164 aa12.01□□□□□ -0.49
GPN1-212ENST00000616939 Q8N6K4 173 aa12.01□□□□□ -0.49
GPN1-212ENST00000616939 DEFB124Q8NES8 71 aa12.01□□□□□ -0.49
GPN1-212ENST00000616939 ONECUT1Q9UBC0 465 aa12.01□□□□□ -0.49
GPN1-212ENST00000616939 NBEAQ8NFP9 2946 aa12□□□□□ -0.49
GPN1-212ENST00000616939 IGHV7-4-1A0A0J9YVY3 117 aa12□□□□□ -0.49
GPN1-212ENST00000616939 MYMXA0A1B0GTQ4 84 aa12□□□□□ -0.49
GPN1-212ENST00000616939 OOSP1A8MZH6 123 aa12□□□□□ -0.49
GPN1-212ENST00000616939 CCDC144NLQ6NUI1 221 aa12□□□□□ -0.49
GPN1-212ENST00000616939 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12□□□□□ -0.49
GPN1-212ENST00000616939 VPS13AQ96RL7 3174 aa12□□□□□ -0.49
GPN1-212ENST00000616939 AGRNO00468 2067 aa12□□□□□ -0.49
GPN1-212ENST00000616939 SPAARA0A1B0GVQ0 90 aa12□□□□□ -0.49
GPN1-212ENST00000616939 OR11H12B2RN74 326 aa12□□□□□ -0.49
GPN1-212ENST00000616939 H3BMG7 143 aa12□□□□□ -0.49
GPN1-212ENST00000616939 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12□□□□□ -0.49
GPN1-212ENST00000616939 TRGV3P03979 118 aa12□□□□□ -0.49
GPN1-212ENST00000616939 NDPQ00604 133 aa12□□□□□ -0.49
GPN1-212ENST00000616939 ERCC8Q13216 396 aa12□□□□□ -0.49
GPN1-212ENST00000616939 EBI3Q14213 229 aa12□□□□□ -0.49
GPN1-212ENST00000616939 OR11H1Q8NG94 326 aa12□□□□□ -0.49
GPN1-212ENST00000616939 OR11H2Q8NH07 326 aa12□□□□□ -0.49
GPN1-212ENST00000616939 SPOCK3Q9BQ16 436 aa12□□□□□ -0.49
GPN1-212ENST00000616939 SMIM2Q9BVW6 85 aa12□□□□□ -0.49
GPN1-212ENST00000616939 PRAC2D3DTV9 90 aa11.99□□□□□ -0.49
GPN1-212ENST00000616939 ETDBQ3ZM63 59 aa11.99□□□□□ -0.49
GPN1-212ENST00000616939 ORMDL2Q53FV1 153 aa11.99□□□□□ -0.49
GPN1-212ENST00000616939 ZFAND3Q9H8U3 227 aa11.99□□□□□ -0.49
GPN1-212ENST00000616939 C11orf21Q9P2W6 132 aa11.99□□□□□ -0.49
GPN1-212ENST00000616939 IGFL4Q6B9Z1 124 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms