RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 TMEM75Q8N9X5 138 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 C8orf46Q8TAG6 207 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 Q8TAT8 98 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 PTH2Q96A98 100 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 SLC25A39Q9BZJ4 359 aaPredicted RBP10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 OTORQ9NRC9 128 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 IGLV3-9A0A075B6K5 115 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 IGKCP01834 107 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 CEND1Q8N111 149 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 CYSLTR1Q9Y271 337 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 CUL9Q8IWT3 2517 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 ZNF292O60281 2723 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 SIVA1O15304 175 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 TMEM167AQ8TBQ9 72 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 ONECUT1Q9UBC0 465 aa10.58□□□□□ -0.72
PCDHA11-202ENST00000616325 IGHV3OR16-13A0A075B7E8 117 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 IGHV3-74A0A0B4J1X5 117 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 GATA3P23771 443 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 ATP5IP56385 69 aaPredicted RBP10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 C12orf74Q32Q52 190 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 RPEQ96AT9 228 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 MRAP2Q96G30 205 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 NCOR2Q9Y618 2525 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 MBD3L4A6NDZ8 208 aaPredicted RBP10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 MBD3L3A6NE82 208 aaPredicted RBP10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 MBD3L5A6NJ08 208 aaPredicted RBP10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 TM4SF5O14894 197 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 IL4P05112 153 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 SCGB1A1P11684 91 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 PSMB2P49721 201 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 PRSS33Q8NF86 280 aa10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 MBD3L2Q8NHZ7 208 aaPredicted RBP10.57□□□□□ -0.72
PCDHA11-202ENST00000616325 IGKV2-40A0A087WW87 121 aaPredicted RBP10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 C16orf97H3BN30 126 aa10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 PRRG2O14669 202 aa10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 IGKV2D-40P01614 121 aaPredicted RBP10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 MAPKAPK5-AS1Q8N8E1 139 aa10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 IGLV2-11P01706 119 aa10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 MT-ATP8P03928 68 aa10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 PLA2G2CQ5R387 149 aa10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 TTC9CQ8N5M4 171 aa10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 DEFB104AQ8WTQ1 72 aa10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 MAP1LC3AQ9H492 121 aa10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 TMEM158Q8WZ71 300 aa10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 PRO3102Q9H379 93 aa10.56□□□□□ -0.72
PCDHA11-202ENST00000616325 ZNF785A8K8V0 405 aa10.55□□□□□ -0.72
PCDHA11-202ENST00000616325 MRPL16Q9NX20 251 aaKnown RBP10.55□□□□□ -0.72
PCDHA11-202ENST00000616325 SMPXQ9UHP9 88 aa10.55□□□□□ -0.72
PCDHA11-202ENST00000616325 ZNF48Q96MX3 618 aaPredicted RBP10.55□□□□□ -0.72
PCDHA11-202ENST00000616325 IGLV2-23P01705 113 aa10.55□□□□□ -0.72
PCDHA11-202ENST00000616325 ZNF562Q6V9R5 426 aa10.55□□□□□ -0.72
PCDHA11-202ENST00000616325 DPF1Q92782 380 aa10.55□□□□□ -0.72
PCDHA11-202ENST00000616325 RNF183Q96D59 192 aa10.55□□□□□ -0.72
PCDHA11-202ENST00000616325 MRPL35Q9NZE8 188 aaKnown RBP10.55□□□□□ -0.72
PCDHA11-202ENST00000616325 TMEM178BH3BS89 294 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 GATA4P43694 442 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 THAP8Q8NA92 274 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 NGBQ9NPG2 151 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 CHD8Q9HCK8 2581 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 PTPRQQ9UMZ3 2332 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 SH2D1AO60880 128 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 IGHV1-8P0DP01 117 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 PPP1R27Q86WC6 154 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 AAMDCQ9H7C9 122 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 IGHV3-66A0A0C4DH42 116 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 NCBP2LA6PVI3 153 aaKnown RBP10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 E9PLD3 99 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 DPM2O94777 84 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 LOXP28300 417 aaPredicted RBP10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 PGPEP1Q9NXJ5 209 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 UFC1Q9Y3C8 167 aa10.54□□□□□ -0.72
PCDHA11-202ENST00000616325 NOTCH3Q9UM47 2321 aa10.53□□□□□ -0.72
PCDHA11-202ENST00000616325 ODF1Q14990 250 aa10.53□□□□□ -0.72
PCDHA11-202ENST00000616325 A0A0G2JNJ9 132 aa10.53□□□□□ -0.72
PCDHA11-202ENST00000616325 SRSF9Q13242 221 aaKnown RBP eCLIP10.53□□□□□ -0.72
PCDHA11-202ENST00000616325 C8orf86Q6ZUL3 223 aa10.53□□□□□ -0.72
PCDHA11-202ENST00000616325 SCNM1Q9BWG6 230 aa10.53□□□□□ -0.72
PCDHA11-202ENST00000616325 Q9UFV3 132 aa10.53□□□□□ -0.72
PCDHA11-202ENST00000616325 IGHV3-49A0A0A0MS15 119 aa10.52□□□□□ -0.72
PCDHA11-202ENST00000616325 TMEM238LA0A1B0GVL6 79 aa10.52□□□□□ -0.72
PCDHA11-202ENST00000616325 WI2-2373I1.2A0A1W2PRP0 233 aa10.52□□□□□ -0.72
PCDHA11-202ENST00000616325 PRR30Q53SZ7 412 aaPredicted RBP10.52□□□□□ -0.72
PCDHA11-202ENST00000616325 GFRALQ6UXV0 394 aa10.52□□□□□ -0.72
PCDHA11-202ENST00000616325 SCGB1D4Q6XE38 83 aa10.52□□□□□ -0.72
PCDHA11-202ENST00000616325 TRGV9Q99603 122 aa10.52□□□□□ -0.72
PCDHA11-202ENST00000616325 CUBNO60494 3623 aa10.52□□□□□ -0.73
PCDHA11-202ENST00000616325 B5MCH6 92 aa10.52□□□□□ -0.73
PCDHA11-202ENST00000616325 J3KRW8 73 aa10.52□□□□□ -0.73
PCDHA11-202ENST00000616325 MYOZ3Q8TDC0 251 aa10.52□□□□□ -0.73
PCDHA11-202ENST00000616325 ANAPC13Q9BS18 74 aa10.52□□□□□ -0.73
PCDHA11-202ENST00000616325 HHLA3Q9XRX5 114 aa10.52□□□□□ -0.73
PCDHA11-202ENST00000616325 SIGLEC9Q9Y336 463 aa10.52□□□□□ -0.73
PCDHA11-202ENST00000616325 CELSR1Q9NYQ6 3014 aa10.52□□□□□ -0.73
PCDHA11-202ENST00000616325 EFNA4P52798 201 aa10.52□□□□□ -0.73
PCDHA11-202ENST00000616325 SPATA25Q9BR10 227 aa10.52□□□□□ -0.73
PCDHA11-202ENST00000616325 TRAV26-2A0A0B4J265 109 aa10.51□□□□□ -0.73
PCDHA11-202ENST00000616325 LINC01560Q8TB33 94 aa10.51□□□□□ -0.73
PCDHA11-202ENST00000616325 TRBV19A0A075B6N1 114 aa10.51□□□□□ -0.73
PCDHA11-202ENST00000616325 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
PCDHA11-202ENST00000616325 KLRD1Q13241 179 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms