RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 LINC00473A8K010 186 aa11.17□□□□□ -0.62
CHD1-212ENST00000614616 IGHG2P01859 326 aa11.17□□□□□ -0.62
CHD1-212ENST00000614616 CECR9P0C854 216 aa11.17□□□□□ -0.62
CHD1-212ENST00000614616 RPL32P62910 135 aaKnown RBP11.17□□□□□ -0.62
CHD1-212ENST00000614616 ZCCHC24Q8N2G6 241 aaKnown RBP11.17□□□□□ -0.62
CHD1-212ENST00000614616 B9A039 149 aa11.17□□□□□ -0.62
CHD1-212ENST00000614616 TRPT1Q86TN4 253 aaKnown RBP11.17□□□□□ -0.62
CHD1-212ENST00000614616 ZNF493Q6ZR52 646 aa11.16□□□□□ -0.62
CHD1-212ENST00000614616 CNOT1A5YKK6 2376 aaKnown RBP11.16□□□□□ -0.62
CHD1-212ENST00000614616 TRGV2A0A075B6R0 118 aa11.16□□□□□ -0.62
CHD1-212ENST00000614616 IGHV3OR16-8A0A075B7F1 116 aa11.16□□□□□ -0.62
CHD1-212ENST00000614616 TMEM213A2RRL7 107 aa11.16□□□□□ -0.62
CHD1-212ENST00000614616 MRPL23Q16540 153 aaKnown RBP11.16□□□□□ -0.62
CHD1-212ENST00000614616 CELA3BP08861 270 aa11.16□□□□□ -0.62
CHD1-212ENST00000614616 TRIOBPQ9H2D6 2365 aa11.16□□□□□ -0.62
CHD1-212ENST00000614616 C2orf66Q6UXQ4 117 aa11.16□□□□□ -0.62
CHD1-212ENST00000614616 C8orf49Q96NF6 230 aa11.16□□□□□ -0.62
CHD1-212ENST00000614616 CACNA1GO43497 2377 aa11.16□□□□□ -0.62
CHD1-212ENST00000614616 TRBV7-1A0A0A6YYK4 115 aa11.16□□□□□ -0.62
CHD1-212ENST00000614616 FOXF2Q12947 444 aa11.15□□□□□ -0.62
CHD1-212ENST00000614616 Q8TAT8 98 aa11.15□□□□□ -0.62
CHD1-212ENST00000614616 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
CHD1-212ENST00000614616 CFC1BP0CG36 223 aa11.15□□□□□ -0.62
CHD1-212ENST00000614616 CFC1P0CG37 223 aa11.15□□□□□ -0.62
CHD1-212ENST00000614616 CDK2AP2O75956 126 aa11.15□□□□□ -0.62
CHD1-212ENST00000614616 HOXD3P31249 432 aaPredicted RBP11.15□□□□□ -0.62
CHD1-212ENST00000614616 Q6P435 159 aa11.15□□□□□ -0.62
CHD1-212ENST00000614616 CACNA1HO95180 2353 aa11.15□□□□□ -0.62
CHD1-212ENST00000614616 PAX8Q06710 450 aa11.15□□□□□ -0.62
CHD1-212ENST00000614616 IL17RELQ6ZVW7 336 aa11.15□□□□□ -0.62
CHD1-212ENST00000614616 RNASE2P10153 161 aaKnown RBP11.14□□□□□ -0.63
CHD1-212ENST00000614616 CENPVQ7Z7K6 275 aaPredicted RBP11.14□□□□□ -0.63
CHD1-212ENST00000614616 J3QQQ9 107 aa11.14□□□□□ -0.63
CHD1-212ENST00000614616 FAM216BQ8N7L0 139 aa11.14□□□□□ -0.63
CHD1-212ENST00000614616 ITLN2Q8WWU7 325 aaPredicted RBP11.14□□□□□ -0.63
CHD1-212ENST00000614616 I3L3M4 83 aa11.14□□□□□ -0.63
CHD1-212ENST00000614616 CHCHD5Q9BSY4 110 aa11.14□□□□□ -0.63
CHD1-212ENST00000614616 HAMPP81172 84 aa11.13□□□□□ -0.63
CHD1-212ENST00000614616 UQCRQO14949 82 aa11.13□□□□□ -0.63
CHD1-212ENST00000614616 BAALC-AS2P0C853 105 aa11.13□□□□□ -0.63
CHD1-212ENST00000614616 LRP4O75096 1905 aa11.13□□□□□ -0.63
CHD1-212ENST00000614616 TRAV41A0A0B4J266 112 aa11.13□□□□□ -0.63
CHD1-212ENST00000614616 C20orf204Q6ZNR8 217 aa11.13□□□□□ -0.63
CHD1-212ENST00000614616 SMRP1Q8NCR6 262 aa11.13□□□□□ -0.63
CHD1-212ENST00000614616 IGHG3P01860 377 aa11.13□□□□□ -0.63
CHD1-212ENST00000614616 SPATA25Q9BR10 227 aa11.13□□□□□ -0.63
CHD1-212ENST00000614616 SRRM4A7MD48 611 aaKnown RBP11.13□□□□□ -0.63
CHD1-212ENST00000614616 TIMM23O14925 209 aa11.12□□□□□ -0.63
CHD1-212ENST00000614616 NUPR1O60356 82 aa11.12□□□□□ -0.63
CHD1-212ENST00000614616 ORMDL1Q9P0S3 153 aa11.12□□□□□ -0.63
CHD1-212ENST00000614616 TRAV12-1A0A0B4J245 112 aa11.12□□□□□ -0.63
CHD1-212ENST00000614616 WIPF3A6NGB9 483 aa11.12□□□□□ -0.63
CHD1-212ENST00000614616 IGHV1-2P23083 117 aa11.12□□□□□ -0.63
CHD1-212ENST00000614616 SRSF2Q01130 221 aaKnown RBP11.12□□□□□ -0.63
CHD1-212ENST00000614616 C22orf46C9J442 243 aa11.12□□□□□ -0.63
CHD1-212ENST00000614616 ACACAQ13085 2346 aa11.12□□□□□ -0.63
CHD1-212ENST00000614616 EGR2P11161 476 aaPredicted RBP11.12□□□□□ -0.63
CHD1-212ENST00000614616 CR1LQ2VPA4 569 aa11.12□□□□□ -0.63
CHD1-212ENST00000614616 C6orf226Q5I0X4 101 aa11.12□□□□□ -0.63
CHD1-212ENST00000614616 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
CHD1-212ENST00000614616 C20orf78Q9BR46 151 aa11.11□□□□□ -0.63
CHD1-212ENST00000614616 TMEM14CQ9P0S9 112 aa11.11□□□□□ -0.63
CHD1-212ENST00000614616 LTAP01374 205 aa11.11□□□□□ -0.63
CHD1-212ENST00000614616 RFPL3SP0C7P2 107 aa11.11□□□□□ -0.63
CHD1-212ENST00000614616 IL15RAQ13261 267 aa11.11□□□□□ -0.63
CHD1-212ENST00000614616 F6UB75 175 aa11.11□□□□□ -0.63
CHD1-212ENST00000614616 DTX2Q86UW9 622 aa11.11□□□□□ -0.63
CHD1-212ENST00000614616 ICOSQ9Y6W8 199 aa11.11□□□□□ -0.63
CHD1-212ENST00000614616 C15orf32Q32M92 178 aa11.1□□□□□ -0.63
CHD1-212ENST00000614616 C9orf139Q6ZV77 190 aa11.1□□□□□ -0.63
CHD1-212ENST00000614616 STHQ8IWL8 128 aa11.1□□□□□ -0.63
CHD1-212ENST00000614616 FXYD2P54710 66 aa11.1□□□□□ -0.63
CHD1-212ENST00000614616 C5orf67F2Z3F1 127 aa11.1□□□□□ -0.63
CHD1-212ENST00000614616 LY6EQ16553 131 aa11.1□□□□□ -0.63
CHD1-212ENST00000614616 INS-IGF2F8WCM5 200 aa11.1□□□□□ -0.63
CHD1-212ENST00000614616 INSP01308 110 aa11.1□□□□□ -0.63
CHD1-212ENST00000614616 PTH2Q96A98 100 aa11.1□□□□□ -0.63
CHD1-212ENST00000614616 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
CHD1-212ENST00000614616 C5orf64Q2M2E5 130 aa11.09□□□□□ -0.63
CHD1-212ENST00000614616 CLUHP3Q96NS8 147 aa11.09□□□□□ -0.63
CHD1-212ENST00000614616 CSRP2Q16527 193 aa11.09□□□□□ -0.63
CHD1-212ENST00000614616 RNF144BQ7Z419 303 aa11.09□□□□□ -0.63
CHD1-212ENST00000614616 SMIM2Q9BVW6 85 aa11.09□□□□□ -0.63
CHD1-212ENST00000614616 CCL3L1P16619 93 aa11.09□□□□□ -0.63
CHD1-212ENST00000614616 NDUFA12Q9UI09 145 aa11.09□□□□□ -0.63
CHD1-212ENST00000614616 PSPNO60542 156 aa11.08□□□□□ -0.64
CHD1-212ENST00000614616 RPL36AP83881 106 aaKnown RBP11.08□□□□□ -0.64
CHD1-212ENST00000614616 TRIP6Q15654 476 aaKnown RBP11.08□□□□□ -0.64
CHD1-212ENST00000614616 FAM201AQ5SY85 155 aa11.08□□□□□ -0.64
CHD1-212ENST00000614616 RPL36ALQ969Q0 106 aaKnown RBP11.08□□□□□ -0.64
CHD1-212ENST00000614616 RNF5Q99942 180 aa11.08□□□□□ -0.64
CHD1-212ENST00000614616 NTN3O00634 580 aaPredicted RBP11.08□□□□□ -0.64
CHD1-212ENST00000614616 FXYD5Q96DB9 178 aa11.08□□□□□ -0.64
CHD1-212ENST00000614616 IGHV3-73A0A0B4J1V6 119 aa11.08□□□□□ -0.64
CHD1-212ENST00000614616 C17orf100A8MU93 164 aa11.08□□□□□ -0.64
CHD1-212ENST00000614616 TRGV4A0A0C4DH28 118 aa11.08□□□□□ -0.64
CHD1-212ENST00000614616 SRRM5B3KS81 715 aa11.08□□□□□ -0.64
CHD1-212ENST00000614616 C3orf22Q8N5N4 141 aa11.07□□□□□ -0.64
CHD1-212ENST00000614616 A0A087WWL8 130 aa11.07□□□□□ -0.64
CHD1-212ENST00000614616 F8WEM9 126 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms