RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SCGB3A1Q96QR1 104 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 NAA38Q9BRA0 125 aaKnown RBP6.83□□□□□ -1.32
LIG4-204ENST00000611712 A0A0G2JLM5 398 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 C19orf71A6NCJ1 209 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 SMIM13P0DJ93 91 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 PRSS57Q6UWY2 283 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 TTC9CQ8N5M4 171 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 JKAMPQ9P055 326 aa6.83□□□□□ -1.32
LIG4-204ENST00000611712 TRBV7-1A0A0A6YYK4 115 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 OR11H12B2RN74 326 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.82□□□□□ -1.32
LIG4-204ENST00000611712 NDUFA3O95167 84 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 OR11H1Q8NG94 326 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 OR11H2Q8NH07 326 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 MLST8Q9BVC4 326 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 IGLV11-55A0A075B6I3 123 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 SRD5A1P18405 259 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 LINC00310P59036 64 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 SEC11AP67812 179 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 COTL1Q14019 142 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 IL17RELQ6ZVW7 336 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 OR4X2Q8NGF9 303 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 DPF1Q92782 380 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 SPEGQ15772 3267 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 VPS13AQ96RL7 3174 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 DOPEY2Q9Y3R5 2298 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 TRAV21A0A0B4J279 112 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 A0A1B0GXF2 115 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 DPM2O94777 84 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 SCGB1C2P0DMR2 95 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 EGR2P11161 476 aaPredicted RBP6.82□□□□□ -1.32
LIG4-204ENST00000611712 LDLRAD2Q5SZI1 272 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 NPBQ8NG41 125 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 PRSS22Q9GZN4 317 aa6.82□□□□□ -1.32
LIG4-204ENST00000611712 IGHV2-70DA0A0C4DH43 119 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 TNFRSF6BO95407 300 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 NPYP01303 97 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 SRSF1Q07955 248 aaKnown RBP eCLIP6.81□□□□□ -1.32
LIG4-204ENST00000611712 GAGE1Q13065 139 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 RUSC1-AS1Q66K80 236 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 NPFFR1Q9GZQ6 430 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 RNF114Q9Y508 228 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 IGKCP01834 107 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 PSMG4Q5JS54 123 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 TMEM158Q8WZ71 300 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 ZNF747Q9BV97 191 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 H3BUX3 64 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 HSD52Q0P140 79 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 GTSCR1Q86UQ5 136 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 OR9G4Q8NGQ1 327 aa6.81□□□□□ -1.32
LIG4-204ENST00000611712 TET2Q6N021 2002 aaPredicted RBP6.81□□□□□ -1.32
LIG4-204ENST00000611712 IGHV7-81A0A0B4J1V7 117 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 CTSGP08311 255 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 GNLYP22749 145 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 C1orf122Q6ZSJ8 110 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 WFDC12Q8WWY7 111 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 SPCS1Q9Y6A9 102 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 C2orf70A6NJV1 201 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 CRYGBP07316 175 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 MYCNOSP40205 109 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 C9orf139Q6ZV77 190 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 KIR2DL4Q99706 377 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 CD5LO43866 347 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 HOXB4P17483 251 aaPredicted RBP6.8□□□□□ -1.32
LIG4-204ENST00000611712 LAGE3Q14657 143 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 Q1RN00 199 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 DYNAPQ8N1N2 210 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 FANCD2OSQ96PS1 177 aa6.8□□□□□ -1.32
LIG4-204ENST00000611712 WI2-2373I1.2A0A1W2PRP0 233 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 OVOL1O14753 267 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 OR2K2Q8NGT1 345 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 NHP2Q9NX24 153 aaKnown RBP6.79□□□□□ -1.32
LIG4-204ENST00000611712 SNRPD3P62318 126 aaKnown RBP6.79□□□□□ -1.32
LIG4-204ENST00000611712 ADORA2A-AS1P86434 159 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 ZNF56Q15929 161 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 ZC2HC1BQ5TFG8 222 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 C8orf86Q6ZUL3 223 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 OR1N2Q8NGR9 330 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 COX8AP10176 69 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 SYT8Q8NBV8 401 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 EYSQ5T1H1 3165 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 SMAD7O15105 426 aaKnown RBP6.79□□□□□ -1.32
LIG4-204ENST00000611712 PPP1R17O96001 155 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 MSRB1Q9NZV6 116 aa6.79□□□□□ -1.32
LIG4-204ENST00000611712 CD7P09564 240 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 PAX1P15863 534 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 BVES-AS1Q5T3Y7 98 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 BCL6BQ8N143 479 aaPredicted RBP6.78□□□□□ -1.32
LIG4-204ENST00000611712 C14orf178Q8N769 122 aaPredicted RBP6.78□□□□□ -1.32
LIG4-204ENST00000611712 LOC107984156A0A0G2JMH3 177 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 ZFP36P26651 326 aaKnown RBP6.78□□□□□ -1.32
LIG4-204ENST00000611712 ARL17AQ8IVW1 177 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 Q8N9W7 124 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 DEFB104AQ8WTQ1 72 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 LINC00477Q96M19 166 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 AGPAT4-IT1Q9H0P7 198 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 LGALS9BQ3B8N2 356 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 FBXL19-AS1Q494R0 122 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 ORMDL2Q53FV1 153 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 LGALS9CQ6DKI2 356 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms