RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 C17orf77Q96MU5 243 aa9.87□□□□□ -0.83
CDH1-212ENST00000611625 K7ENP7 123 aa9.87□□□□□ -0.83
CDH1-212ENST00000611625 PROP1O75360 226 aa9.87□□□□□ -0.83
CDH1-212ENST00000611625 COX8AP10176 69 aa9.87□□□□□ -0.83
CDH1-212ENST00000611625 GAGE13Q4V321 117 aa9.87□□□□□ -0.83
CDH1-212ENST00000611625 LINC01587Q99440 93 aa9.86□□□□□ -0.83
CDH1-212ENST00000611625 FAM223BA6NKX1 122 aa9.86□□□□□ -0.83
CDH1-212ENST00000611625 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
CDH1-212ENST00000611625 UBE2E1P51965 193 aa9.86□□□□□ -0.83
CDH1-212ENST00000611625 IL17RELQ6ZVW7 336 aa9.86□□□□□ -0.83
CDH1-212ENST00000611625 FAM223AQ8IWN6 122 aa9.86□□□□□ -0.83
CDH1-212ENST00000611625 WISP2O76076 250 aa9.86□□□□□ -0.83
CDH1-212ENST00000611625 CR1LQ2VPA4 569 aa9.86□□□□□ -0.83
CDH1-212ENST00000611625 LGALS9BQ3B8N2 356 aa9.86□□□□□ -0.83
CDH1-212ENST00000611625 LGALS9CQ6DKI2 356 aa9.86□□□□□ -0.83
CDH1-212ENST00000611625 PRSS22Q9GZN4 317 aa9.86□□□□□ -0.83
CDH1-212ENST00000611625 CHD3Q12873 2000 aaKnown RBP9.86□□□□□ -0.83
CDH1-212ENST00000611625 G3V318 75 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 GP9P14770 177 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 USMG5Q96IX5 58 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 IGKV3OR2-268A0A0C4DH90 116 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 C22orf46C9J442 243 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 H3BRM9 83 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 SEM1Q6ZVN7 128 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 YPEL4Q96NS1 127 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 CSTL1Q9H114 145 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 NPYP01303 97 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 FRMD6-AS1P0C7T7 363 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 DEFB104AQ8WTQ1 72 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 TRGV11A0A075B6L2 103 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 FCN3O75636 299 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 RHPN1-AS1Q9BWJ2 59 aa9.85□□□□□ -0.83
CDH1-212ENST00000611625 TRAV2A0A0B4J234 112 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 SHISA9B4DS77 424 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 TTC32Q5I0X7 151 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 SPG11Q96JI7 2443 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 PTPRSQ13332 1948 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 TRAV12-3A0A0B4J271 114 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 TMEM8BA6NDV4 472 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 CD28P10747 220 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 MTURNQ8N3F0 131 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 Q8N8P6 123 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 VGLL1Q99990 258 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 CST9LQ9H4G1 147 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 NCKAP5O14513 1909 aa9.84□□□□□ -0.83
CDH1-212ENST00000611625 VCYO14598 125 aa9.83□□□□□ -0.84
CDH1-212ENST00000611625 IGKV1-17P01599 117 aa9.83□□□□□ -0.84
CDH1-212ENST00000611625 FAM120AOSQ5T036 256 aa9.83□□□□□ -0.84
CDH1-212ENST00000611625 SIGMAR1Q99720 223 aa9.83□□□□□ -0.84
CDH1-212ENST00000611625 PEMTQ9UBM1 199 aa9.83□□□□□ -0.84
CDH1-212ENST00000611625 CENPFP49454 3210 aa9.83□□□□□ -0.84
CDH1-212ENST00000611625 BVES-AS1Q5T3Y7 98 aa9.83□□□□□ -0.84
CDH1-212ENST00000611625 PRSS33Q8NF86 280 aa9.83□□□□□ -0.84
CDH1-212ENST00000611625 ZNF747Q9BV97 191 aa9.83□□□□□ -0.84
CDH1-212ENST00000611625 OCIAD2Q56VL3 154 aa9.83□□□□□ -0.84
CDH1-212ENST00000611625 RITA1Q96K30 269 aa9.83□□□□□ -0.84
CDH1-212ENST00000611625 IGHV3-64A0A075B6Q5 118 aa9.82□□□□□ -0.84
CDH1-212ENST00000611625 OVOL3O00110 214 aa9.82□□□□□ -0.84
CDH1-212ENST00000611625 C8orf86Q6ZUL3 223 aa9.82□□□□□ -0.84
CDH1-212ENST00000611625 ESDP10768 282 aa9.82□□□□□ -0.84
CDH1-212ENST00000611625 MRPL36Q9P0J6 103 aaKnown RBP9.82□□□□□ -0.84
CDH1-212ENST00000611625 E7EUB6 86 aa9.82□□□□□ -0.84
CDH1-212ENST00000611625 INS-IGF2F8WCM5 200 aa9.82□□□□□ -0.84
CDH1-212ENST00000611625 DAZ1Q9NQZ3 744 aaKnown RBP9.82□□□□□ -0.84
CDH1-212ENST00000611625 ZNF876PQ49A33 203 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 RUSC1-AS1Q66K80 236 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 IGHV2-70DA0A0C4DH43 119 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 C9orf118A6NHY6 69 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 A8MWV9 139 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 I3L2K1 104 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 Q6ZVH6 145 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 TMEM101Q96IK0 257 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 K7EIM0 57 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 CGB3P0DN86 165 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 CGB7P0DN87 165 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 EIF4EBP1Q13541 118 aaPredicted RBP9.81□□□□□ -0.84
CDH1-212ENST00000611625 TRAV8-2A0A0B4J237 113 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 HLA-DMBP28068 263 aa9.81□□□□□ -0.84
CDH1-212ENST00000611625 A0A087WWL8 130 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 B4DSR2 109 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 LINC00173Q6ZV60 143 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 DTX2Q86UW9 622 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 ZNF503Q96F45 646 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 GNLYP22749 145 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 C2orf66Q6UXQ4 117 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 MSRB2Q9Y3D2 182 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 MUC6Q6W4X9 2439 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 IGKV3D-20A0A0C4DH25 116 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 DNAL4O96015 105 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 IGLV2-23P01705 113 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 EGR2P11161 476 aaPredicted RBP9.8□□□□□ -0.84
CDH1-212ENST00000611625 EMP1P54849 157 aa9.8□□□□□ -0.84
CDH1-212ENST00000611625 PGPEP1Q9NXJ5 209 aa9.79□□□□□ -0.84
CDH1-212ENST00000611625 KLF12Q9Y4X4 402 aa9.79□□□□□ -0.84
CDH1-212ENST00000611625 TRAV26-2A0A0B4J265 109 aa9.79□□□□□ -0.84
CDH1-212ENST00000611625 UTF1Q5T230 341 aa9.79□□□□□ -0.84
CDH1-212ENST00000611625 GTSF1Q8WW33 167 aa9.79□□□□□ -0.84
CDH1-212ENST00000611625 ERG28Q9UKR5 140 aa9.79□□□□□ -0.84
CDH1-212ENST00000611625 TMEM238C9JI98 176 aa9.79□□□□□ -0.84
CDH1-212ENST00000611625 NDUFS7O75251 213 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms