RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 FXYD2P54710 66 aa11.76□□□□□ -0.53
PCDHGB1-202ENST00000611598 MFAP4P55083 255 aa11.76□□□□□ -0.53
PCDHGB1-202ENST00000611598 HES1Q14469 280 aa11.76□□□□□ -0.53
PCDHGB1-202ENST00000611598 IGF2-ASQ6U949 168 aa11.76□□□□□ -0.53
PCDHGB1-202ENST00000611598 NEGR1Q7Z3B1 354 aa11.76□□□□□ -0.53
PCDHGB1-202ENST00000611598 ZFHX2Q9C0A1 2572 aaPredicted RBP11.76□□□□□ -0.53
PCDHGB1-202ENST00000611598 ORM1P02763 201 aa11.76□□□□□ -0.53
PCDHGB1-202ENST00000611598 GCSHP23434 173 aa11.76□□□□□ -0.53
PCDHGB1-202ENST00000611598 LEPP41159 167 aa11.76□□□□□ -0.53
PCDHGB1-202ENST00000611598 PSMG3-AS1Q96PY0 264 aa11.76□□□□□ -0.53
PCDHGB1-202ENST00000611598 K7ERJ3 54 aa11.75□□□□□ -0.53
PCDHGB1-202ENST00000611598 LY6HO94772 140 aa11.75□□□□□ -0.53
PCDHGB1-202ENST00000611598 ODF1Q14990 250 aa11.75□□□□□ -0.53
PCDHGB1-202ENST00000611598 MAP1LC3AQ9H492 121 aa11.75□□□□□ -0.53
PCDHGB1-202ENST00000611598 HHLA3Q9XRX5 114 aa11.75□□□□□ -0.53
PCDHGB1-202ENST00000611598 WNK2Q9Y3S1 2297 aa11.75□□□□□ -0.53
PCDHGB1-202ENST00000611598 NDUFA3O95167 84 aa11.75□□□□□ -0.53
PCDHGB1-202ENST00000611598 ERCC8Q13216 396 aa11.75□□□□□ -0.53
PCDHGB1-202ENST00000611598 NPFFR1Q9GZQ6 430 aa11.75□□□□□ -0.53
PCDHGB1-202ENST00000611598 C21orf62Q9NYP8 219 aa11.75□□□□□ -0.53
PCDHGB1-202ENST00000611598 ABCA4P78363 2273 aa11.75□□□□□ -0.53
PCDHGB1-202ENST00000611598 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 K7EMI3 77 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 RPL7P18124 248 aaKnown RBP11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 C5orf64Q2M2E5 130 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 ZNF562Q6V9R5 426 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 ZNF292O60281 2723 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 BMI1P35226 326 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 NPBQ8NG41 125 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 DPM3Q9P2X0 92 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 B9A039 149 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 PRAC2D3DTV9 90 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 TNFRSF6BO95407 300 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 PRR30Q53SZ7 412 aaPredicted RBP11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 SAMD5Q5TGI4 173 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 DYNAPQ8N1N2 210 aa11.74□□□□□ -0.53
PCDHGB1-202ENST00000611598 PRSS1P07477 247 aa11.73□□□□□ -0.53
PCDHGB1-202ENST00000611598 Q8NA96 180 aa11.73□□□□□ -0.53
PCDHGB1-202ENST00000611598 ZMAT4Q9H898 229 aa11.73□□□□□ -0.53
PCDHGB1-202ENST00000611598 FABP2P12104 132 aa11.73□□□□□ -0.53
PCDHGB1-202ENST00000611598 FCER1GP30273 86 aa11.73□□□□□ -0.53
PCDHGB1-202ENST00000611598 S100A7AQ86SG5 101 aa11.73□□□□□ -0.53
PCDHGB1-202ENST00000611598 GTSCR1Q86UQ5 136 aa11.73□□□□□ -0.53
PCDHGB1-202ENST00000611598 OR5A1Q8NGJ0 315 aa11.73□□□□□ -0.53
PCDHGB1-202ENST00000611598 ARPC1AQ92747 370 aa11.73□□□□□ -0.53
PCDHGB1-202ENST00000611598 CHAC1Q9BUX1 264 aa11.73□□□□□ -0.53
PCDHGB1-202ENST00000611598 TMEM238C9JI98 176 aa11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 CTSGP08311 255 aa11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 TMEM158Q8WZ71 300 aa11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 ZNF48Q96MX3 618 aaPredicted RBP11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 FOXC2Q99958 501 aa11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 RIF1Q5UIP0 2472 aaKnown RBP11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 ASH1LQ9NR48 2969 aaKnown RBP11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 FBLL1A6NHQ2 334 aaKnown RBP11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 NCBP2LA6PVI3 153 aaKnown RBP11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 CD3EP07766 207 aa11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 SMIM13P0DJ93 91 aa11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 ZNF672Q499Z4 452 aaPredicted RBP11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 RNF182Q8N6D2 247 aa11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 CNFNQ9BYD5 112 aa11.72□□□□□ -0.53
PCDHGB1-202ENST00000611598 LINC01546A6NGU7 62 aa11.71□□□□□ -0.53
PCDHGB1-202ENST00000611598 LINC01560Q8TB33 94 aa11.71□□□□□ -0.53
PCDHGB1-202ENST00000611598 SPTBN2O15020 2390 aa11.71□□□□□ -0.53
PCDHGB1-202ENST00000611598 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.54
PCDHGB1-202ENST00000611598 IGKCP01834 107 aa11.71□□□□□ -0.54
PCDHGB1-202ENST00000611598 LY6G5BQ8NDX9 201 aa11.71□□□□□ -0.54
PCDHGB1-202ENST00000611598 PIFOQ8TCI5 191 aa11.71□□□□□ -0.54
PCDHGB1-202ENST00000611598 FABP5P3A8MUU1 101 aa11.7□□□□□ -0.54
PCDHGB1-202ENST00000611598 TRGV3P03979 118 aa11.7□□□□□ -0.54
PCDHGB1-202ENST00000611598 ZC2HC1BQ5TFG8 222 aa11.7□□□□□ -0.54
PCDHGB1-202ENST00000611598 IL17RELQ6ZVW7 336 aa11.7□□□□□ -0.54
PCDHGB1-202ENST00000611598 DTX2Q86UW9 622 aa11.7□□□□□ -0.54
PCDHGB1-202ENST00000611598 OR11H6Q8NGC7 330 aa11.7□□□□□ -0.54
PCDHGB1-202ENST00000611598 TMEM8BA6NDV4 472 aa11.7□□□□□ -0.54
PCDHGB1-202ENST00000611598 TTC9CQ8N5M4 171 aa11.7□□□□□ -0.54
PCDHGB1-202ENST00000611598 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
PCDHGB1-202ENST00000611598 NXT2Q9NPJ8 142 aaKnown RBP11.7□□□□□ -0.54
PCDHGB1-202ENST00000611598 CACNA1BQ00975 2339 aa11.69□□□□□ -0.54
PCDHGB1-202ENST00000611598 NHP2Q9NX24 153 aaKnown RBP11.69□□□□□ -0.54
PCDHGB1-202ENST00000611598 HIGD1BQ9P298 99 aa11.69□□□□□ -0.54
PCDHGB1-202ENST00000611598 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
PCDHGB1-202ENST00000611598 IGHV3-66A0A0C4DH42 116 aa11.69□□□□□ -0.54
PCDHGB1-202ENST00000611598 RPL24P83731 157 aaKnown RBP11.69□□□□□ -0.54
PCDHGB1-202ENST00000611598 TMEM160Q9NX00 188 aa11.69□□□□□ -0.54
PCDHGB1-202ENST00000611598 IGLV2-18A0A075B6J9 118 aa11.68□□□□□ -0.54
PCDHGB1-202ENST00000611598 TRAV26-2A0A0B4J265 109 aa11.68□□□□□ -0.54
PCDHGB1-202ENST00000611598 IGKV3D-20A0A0C4DH25 116 aa11.68□□□□□ -0.54
PCDHGB1-202ENST00000611598 TEX48A0A1B0GUV7 120 aa11.68□□□□□ -0.54
PCDHGB1-202ENST00000611598 TRAV40A0A0B4J280 105 aa11.68□□□□□ -0.54
PCDHGB1-202ENST00000611598 GRNP28799 593 aaKnown RBP11.68□□□□□ -0.54
PCDHGB1-202ENST00000611598 CEACAM3P40198 252 aa11.68□□□□□ -0.54
PCDHGB1-202ENST00000611598 LINC01559Q495D7 138 aa11.68□□□□□ -0.54
PCDHGB1-202ENST00000611598 MAPKAPK5-AS1Q8N8E1 139 aa11.68□□□□□ -0.54
PCDHGB1-202ENST00000611598 ANKHD1Q8IWZ3 2542 aaKnown RBP11.67□□□□□ -0.54
PCDHGB1-202ENST00000611598 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
PCDHGB1-202ENST00000611598 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
PCDHGB1-202ENST00000611598 ODF3BA8MYP8 253 aa11.67□□□□□ -0.54
PCDHGB1-202ENST00000611598 DPM2O94777 84 aa11.67□□□□□ -0.54
PCDHGB1-202ENST00000611598 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
PCDHGB1-202ENST00000611598 Q6ZQT7 251 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms