RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 IGHV4-28A0A0C4DH34 117 aa6.24□□□□□ -1.41
SNCA-212ENST00000611107 CRXO43186 299 aaPredicted RBP6.24□□□□□ -1.41
SNCA-212ENST00000611107 DUSP14O95147 198 aaKnown RBP6.24□□□□□ -1.41
SNCA-212ENST00000611107 PRM2P04554 102 aa6.24□□□□□ -1.41
SNCA-212ENST00000611107 GNG5P63218 68 aa6.24□□□□□ -1.41
SNCA-212ENST00000611107 FAM74A1Q5RGS3 127 aa6.24□□□□□ -1.41
SNCA-212ENST00000611107 DPPA3Q6W0C5 159 aa6.24□□□□□ -1.41
SNCA-212ENST00000611107 IQCF2Q8IXL9 164 aa6.24□□□□□ -1.41
SNCA-212ENST00000611107 LYPD1Q8N2G4 141 aa6.24□□□□□ -1.41
SNCA-212ENST00000611107 OTORQ9NRC9 128 aa6.24□□□□□ -1.41
SNCA-212ENST00000611107 TMEM167BQ9NRX6 74 aa6.24□□□□□ -1.41
SNCA-212ENST00000611107 YTHDF2Q9Y5A9 579 aaKnown RBP6.24□□□□□ -1.41
SNCA-212ENST00000611107 A0A1B0GV50 99 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 CXorf65A6NEN9 183 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 ZNF705EA8MWA4 302 aaPredicted RBP6.23□□□□□ -1.41
SNCA-212ENST00000611107 SULT1A2P50226 295 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 NUTF2P61970 127 aaKnown RBP6.23□□□□□ -1.41
SNCA-212ENST00000611107 ERCC8Q13216 396 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 KIR3DS1Q14943 382 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 CEMP1Q6PRD7 247 aaPredicted RBP6.23□□□□□ -1.41
SNCA-212ENST00000611107 ZNF767PQ75MW2 155 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 OR10J6PQ8NGY7 276 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 Q8TAT8 98 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 MBD3L1Q8WWY6 194 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 ODF3Q96PU9 254 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 VGLL1Q99990 258 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 C1QTNF4Q9BXJ3 329 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 RPH3ALQ9UNE2 315 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 MUC4Q99102 2169 aa6.23□□□□□ -1.41
SNCA-212ENST00000611107 TRAV12-2A0A075B6T6 113 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 A0A1W2PRE2 83 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 RBAKDNA6NC62 111 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 PGPA6NDG6 321 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 FAM74A7A6NL05 159 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 DIRC3C9JPN6 131 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 CT45A10P0DMU9 189 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 UBE2G2P60604 165 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 PRR9Q5T870 116 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 EIF5AL1Q6IS14 154 aaKnown RBP6.22□□□□□ -1.41
SNCA-212ENST00000611107 ALKAL2Q6UX46 152 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 ZNF705AQ6ZN79 300 aaPredicted RBP6.22□□□□□ -1.41
SNCA-212ENST00000611107 C9orf47Q6ZRZ4 202 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 C1orf158Q8N1D5 194 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 C5orf17Q8NAS9 161 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 PHLDA1Q8WV24 401 aaPredicted RBP6.22□□□□□ -1.41
SNCA-212ENST00000611107 LINC00476Q8WZB0 136 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 FAM19A4Q96LR4 140 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 IGF2BP2-AS1Q96M15 143 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 AGPAT4-IT1Q9H0P7 198 aa6.22□□□□□ -1.41
SNCA-212ENST00000611107 C11orf68Q9H3H3 251 aaKnown RBP6.22□□□□□ -1.41
SNCA-212ENST00000611107 TRAV8-1A0A0A6YYK1 113 aa6.21□□□□□ -1.42
SNCA-212ENST00000611107 INSP01308 110 aa6.21□□□□□ -1.42
SNCA-212ENST00000611107 SLC25A5P05141 298 aaKnown RBP6.21□□□□□ -1.42
SNCA-212ENST00000611107 H2AFB1P0C5Y9 115 aa6.21□□□□□ -1.42
SNCA-212ENST00000611107 CDKN1BP46527 198 aa6.21□□□□□ -1.42
SNCA-212ENST00000611107 CSN1S1P47710 185 aa6.21□□□□□ -1.42
SNCA-212ENST00000611107 RAB5CP51148 216 aa6.21□□□□□ -1.42
SNCA-212ENST00000611107 GFI1BQ5VTD9 330 aa6.21□□□□□ -1.42
SNCA-212ENST00000611107 GOLT1AQ6ZVE7 132 aa6.21□□□□□ -1.42
SNCA-212ENST00000611107 SFT2D1Q8WV19 159 aa6.21□□□□□ -1.42
SNCA-212ENST00000611107 ARL2-SNX15V9GYD0 113 aa6.21□□□□□ -1.42
SNCA-212ENST00000611107 TRAV1-1A0A0B4J248 108 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 KLLNB2CW77 178 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 J3KRW8 73 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 AMBPP02760 352 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 TCRAP04437 139 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 CRISP2P16562 243 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 ATP5G3P48201 142 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 C12orf74Q32Q52 190 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 TMEM78Q5T7P6 136 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 Q6ZTC4 211 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 ZFAND2AQ8N6M9 145 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 ARL6IP6Q8N6S5 226 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 C11orf45Q8TAV5 145 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 CMTM2Q8TAZ6 248 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 RXFP4Q8TDU9 374 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 ZNF492Q9P255 531 aa6.2□□□□□ -1.42
SNCA-212ENST00000611107 IGHV3OR16-12A0A075B7B8 117 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 PAGE4O60829 102 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 IGLV2-11P01706 119 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 MIFP14174 115 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 TSPOP30536 169 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 LEPP41159 167 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 ZNF138P52744 262 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 SUMO1P63165 101 aaKnown RBP6.19□□□□□ -1.42
SNCA-212ENST00000611107 CCL20P78556 96 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 BTN1A1Q13410 526 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 CCDC28AQ8IWP9 274 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 CYB561D1Q8N8Q1 229 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 LINC00477Q96M19 166 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 NEU1Q99519 415 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 ATG101Q9BSB4 218 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 PPP1R14DQ9NXH3 145 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 APLNQ9ULZ1 77 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 GOLT1BQ9Y3E0 138 aa6.19□□□□□ -1.42
SNCA-212ENST00000611107 TRBV7-9A0A0J9YWB2 115 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 SERTM2A0A1B0GWG4 89 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 C7orf71A4D174 169 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 NUPR2A6NF83 97 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 PEX7O00628 323 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms