RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, human

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTCFL-222	ENST00000609232	LSM4	Q9Y4Z0	139 aa	Known RBP	7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	NPIPB5	A8MRT5	1133 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	TOMM40	O96008	361 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	ESD	P10768	282 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	HOXB4	P17483	251 aa	Predicted RBP	7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	LMO4	P61968	165 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	CCDC144NL	Q6NUI1	221 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	OR4A5	Q8NH83	315 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	LINC00477	Q96M19	166 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	GNB1L	Q9BYB4	327 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	TRAV9-1	A0A075B6T8	112 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	TRAV9-2	A0A087WT02	112 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	NBR2	O15453	112 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	TRGV3	P03979	118 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	C8orf88	P0DMB2	117 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	MPV17L2	Q567V2	206 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	CHRDL1	Q9BU40	450 aa		7.76	□□□□□ -1.17
CTCFL-222	ENST00000609232	OVOL3	O00110	214 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	TEX45	Q8NA69	505 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	TXNDC17	Q9BRA2	123 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	NDUFA4L2	Q9NRX3	87 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232		K7EQM0	130 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	ATP6V0E1	O15342	81 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	IGLV2-23	P01705	113 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	OR11H6	Q8NGC7	330 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	ARPC1A	Q92747	370 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	GGTLC3	B5MD39	225 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	HLA-DQA1	P01909	254 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	ERCC8	Q13216	396 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	OR10J3	Q5JRS4	329 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	IBA57	Q5T440	356 aa	Known RBP	7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	PIP4P2	Q8N4L2	257 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	GEMIN7	Q9H840	131 aa	Known RBP	7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	HIGD1A	Q9Y241	93 aa		7.75	□□□□□ -1.17
CTCFL-222	ENST00000609232	MPDU1	O75352	247 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232	TSKU	Q8WUA8	353 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232	UFC1	Q9Y3C8	167 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232		F6UB75	175 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232		K7EN84	100 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232	FAM106CP	P0CH98	169 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232	ARL3	P36405	182 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232	RAB37	Q96AX2	223 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232	KLK15	Q9H2R5	256 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232	GAGE10	A6NGK3	116 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232	IGLL1	P15814	213 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232		Q8N976	141 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232	VWF	P04275	2813 aa		7.74	□□□□□ -1.17
CTCFL-222	ENST00000609232	IGLC7	A0M8Q6	106 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	PLP1	P60201	277 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	ANXA2R	Q3ZCQ2	193 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	COX19	Q49B96	90 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	TRBV12-3	P01733	135 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	C2orf83	Q53S99	150 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	C10orf105	Q8TEF2	133 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	SMR3A	Q99954	134 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	BMPR1B	O00238	502 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	OR4F17	Q8NGA8	305 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	C21orf62	Q9NYP8	219 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	TNFRSF18	Q9Y5U5	241 aa		7.73	□□□□□ -1.17
CTCFL-222	ENST00000609232	IGHV4-59	P01825	116 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	TMEM136	Q6ZRR5	245 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	RNF152	Q8N8N0	203 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	SIRPD	Q9H106	197 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	OR4C46	A6NHA9	309 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	LY6L	H3BQJ8	138 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	SLC25A34	Q6PIV7	304 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232		Q9H3A6	140 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	AVP	P01185	164 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	UBE2E1	P51965	193 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	C5orf64	Q2M2E5	130 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	PATE2	Q6UY27	113 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232		V9GYV3	84 aa		7.72	□□□□□ -1.17
CTCFL-222	ENST00000609232	FAM181B	A6NEQ2	426 aa		7.71	□□□□□ -1.17
CTCFL-222	ENST00000609232	CHEK1	O14757	476 aa		7.71	□□□□□ -1.17
CTCFL-222	ENST00000609232	SRSF1	Q07955	248 aa	Known RBP eCLIP	7.71	□□□□□ -1.17
CTCFL-222	ENST00000609232	VWC2	Q2TAL6	325 aa		7.71	□□□□□ -1.17
CTCFL-222	ENST00000609232	MINOS1	Q5TGZ0	78 aa		7.71	□□□□□ -1.17
CTCFL-222	ENST00000609232	C12orf54	Q6X4T0	127 aa		7.71	□□□□□ -1.17
CTCFL-222	ENST00000609232		Q6ZQT7	251 aa		7.71	□□□□□ -1.17
CTCFL-222	ENST00000609232	MINOS1-NBL1	R4GNA1	71 aa		7.71	□□□□□ -1.17
CTCFL-222	ENST00000609232	SMKR1	H3BMG3	65 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	NPFF	O15130	113 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	EDN2	P20800	178 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	ATP5I	P56385	69 aa	Predicted RBP	7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	PAX2	Q02962	417 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	YAE1D1	Q9NRH1	226 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	ODF3B	A8MYP8	253 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	SIVA1	O15304	175 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	APOH	P02749	345 aa	Predicted RBP	7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	PSG9	Q00887	426 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	SMIM20	Q8N5G0	67 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	FER1L6-AS1	Q8NA97	138 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	TMEM70	Q9BUB7	260 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	C1RL	Q9NZP8	487 aa		7.71	□□□□□ -1.18
CTCFL-222	ENST00000609232	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	7.7	□□□□□ -1.18
CTCFL-222	ENST00000609232	hDV102S1	A0JD36	115 aa		7.7	□□□□□ -1.18
CTCFL-222	ENST00000609232	CT45A10	P0DMU9	189 aa		7.7	□□□□□ -1.18
CTCFL-222	ENST00000609232	C18orf32	Q8TCD1	76 aa		7.7	□□□□□ -1.18
CTCFL-222	ENST00000609232		Q96MF0	132 aa		7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 590.9 ms