RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 PTPRBP23467 1997 aa9.9□□□□□ -0.82
CTCFL-218ENST00000608440 NTN5Q8WTR8 489 aaPredicted RBP9.9□□□□□ -0.82
CTCFL-218ENST00000608440 SS18L1O75177 396 aaPredicted RBP9.9□□□□□ -0.83
CTCFL-218ENST00000608440 GATD1Q8NB37 220 aa9.9□□□□□ -0.83
CTCFL-218ENST00000608440 SPANXA1Q9NS26 97 aa9.9□□□□□ -0.83
CTCFL-218ENST00000608440 MRPL36Q9P0J6 103 aaKnown RBP9.9□□□□□ -0.83
CTCFL-218ENST00000608440 C15orf65H3BRN8 121 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 C2orf83Q53S99 150 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 SPRNQ5BIV9 151 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 TRPT1Q86TN4 253 aaKnown RBP9.89□□□□□ -0.83
CTCFL-218ENST00000608440 SBSPONQ8IVN8 264 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 IMMP1LQ96LU5 166 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 EDA2RQ9HAV5 297 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 A0A1W2PPI3 338 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 IGLV2-11P01706 119 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 KIR2DS2P43631 304 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 CRIP1P50238 77 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 FOXC1Q12948 553 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 SCGB1D4Q6XE38 83 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 Q8N1Y9 231 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 FAM57AQ8TBR7 257 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 HIGD1AQ9Y241 93 aa9.89□□□□□ -0.83
CTCFL-218ENST00000608440 CFAP47Q6ZTR5 3102 aa9.88□□□□□ -0.83
CTCFL-218ENST00000608440 TRAV8-4A0A0B4J246 113 aa9.88□□□□□ -0.83
CTCFL-218ENST00000608440 ATP5LO75964 103 aa9.88□□□□□ -0.83
CTCFL-218ENST00000608440 LGALS1P09382 135 aaKnown RBP9.88□□□□□ -0.83
CTCFL-218ENST00000608440 LYRM7Q5U5X0 104 aa9.88□□□□□ -0.83
CTCFL-218ENST00000608440 GGNQ86UU5 652 aa9.88□□□□□ -0.83
CTCFL-218ENST00000608440 DKK1O94907 266 aa9.88□□□□□ -0.83
CTCFL-218ENST00000608440 CEP250Q9BV73 2442 aa9.87□□□□□ -0.83
CTCFL-218ENST00000608440 IGKV1D-37A0A075B6S9 117 aa9.87□□□□□ -0.83
CTCFL-218ENST00000608440 TRAV2A0A0B4J234 112 aa9.87□□□□□ -0.83
CTCFL-218ENST00000608440 TEX49A0A1B0GTD5 131 aa9.87□□□□□ -0.83
CTCFL-218ENST00000608440 NPFFO15130 113 aa9.87□□□□□ -0.83
CTCFL-218ENST00000608440 GATA1P15976 413 aaPredicted RBP9.87□□□□□ -0.83
CTCFL-218ENST00000608440 EMP1P54849 157 aa9.87□□□□□ -0.83
CTCFL-218ENST00000608440 ZNF474Q6S9Z5 364 aaPredicted RBP9.87□□□□□ -0.83
CTCFL-218ENST00000608440 LAMA5O15230 3695 aa9.87□□□□□ -0.83
CTCFL-218ENST00000608440 IGKV1-16P04430 117 aa9.87□□□□□ -0.83
CTCFL-218ENST00000608440 HES1Q14469 280 aa9.87□□□□□ -0.83
CTCFL-218ENST00000608440 CTSZQ9UBR2 303 aa9.87□□□□□ -0.83
CTCFL-218ENST00000608440 IGHV3-21A0A0B4J1V1 117 aa9.86□□□□□ -0.83
CTCFL-218ENST00000608440 CD7P09564 240 aa9.86□□□□□ -0.83
CTCFL-218ENST00000608440 UBE2D1P51668 147 aa9.86□□□□□ -0.83
CTCFL-218ENST00000608440 C9orf153Q5TBE3 101 aa9.86□□□□□ -0.83
CTCFL-218ENST00000608440 RUSC1-AS1Q66K80 236 aa9.86□□□□□ -0.83
CTCFL-218ENST00000608440 C1orf162Q8NEQ5 155 aaPredicted RBP9.86□□□□□ -0.83
CTCFL-218ENST00000608440 PLEKHB2Q96CS7 222 aa9.86□□□□□ -0.83
CTCFL-218ENST00000608440 ABCA1O95477 2261 aa9.86□□□□□ -0.83
CTCFL-218ENST00000608440 E7EUB6 86 aa9.86□□□□□ -0.83
CTCFL-218ENST00000608440 DNPH1O43598 174 aa9.86□□□□□ -0.83
CTCFL-218ENST00000608440 SAA2P0DJI9 122 aaPredicted RBP9.86□□□□□ -0.83
CTCFL-218ENST00000608440 Q0VFX4 171 aa9.86□□□□□ -0.83
CTCFL-218ENST00000608440 C10orf126Q8N4M7 172 aa9.86□□□□□ -0.83
CTCFL-218ENST00000608440 PTPRZ1P23471 2315 aaPredicted RBP9.86□□□□□ -0.83
CTCFL-218ENST00000608440 UPK2O00526 184 aa9.85□□□□□ -0.83
CTCFL-218ENST00000608440 WIPF1O43516 503 aa9.85□□□□□ -0.83
CTCFL-218ENST00000608440 ZNF56Q15929 161 aa9.85□□□□□ -0.83
CTCFL-218ENST00000608440 FAM90A1Q86YD7 464 aa9.85□□□□□ -0.83
CTCFL-218ENST00000608440 C8orf49Q96NF6 230 aa9.85□□□□□ -0.83
CTCFL-218ENST00000608440 MSRB1Q9NZV6 116 aa9.85□□□□□ -0.83
CTCFL-218ENST00000608440 NAV3Q8IVL0 2385 aa9.85□□□□□ -0.83
CTCFL-218ENST00000608440 H7C2G1 150 aa9.85□□□□□ -0.83
CTCFL-218ENST00000608440 GP9P14770 177 aa9.85□□□□□ -0.83
CTCFL-218ENST00000608440 NBL1P41271 181 aa9.85□□□□□ -0.83
CTCFL-218ENST00000608440 RPS19BP1Q86WX3 136 aaKnown RBP9.85□□□□□ -0.83
CTCFL-218ENST00000608440 NDUFA11Q86Y39 141 aa9.85□□□□□ -0.83
CTCFL-218ENST00000608440 DUSP14O95147 198 aaKnown RBP9.84□□□□□ -0.83
CTCFL-218ENST00000608440 IGHG4P01861 327 aa9.84□□□□□ -0.83
CTCFL-218ENST00000608440 RFPL3SP0C7P2 107 aa9.84□□□□□ -0.83
CTCFL-218ENST00000608440 B3GALT5-AS1P59052 145 aa9.84□□□□□ -0.83
CTCFL-218ENST00000608440 HERVK_113P63121 156 aa9.84□□□□□ -0.83
CTCFL-218ENST00000608440 C11orf53Q8IXP5 236 aa9.84□□□□□ -0.83
CTCFL-218ENST00000608440 MYOZ3Q8TDC0 251 aa9.84□□□□□ -0.83
CTCFL-218ENST00000608440 TMEM101Q96IK0 257 aa9.84□□□□□ -0.83
CTCFL-218ENST00000608440 VKORC1Q9BQB6 163 aa9.84□□□□□ -0.83
CTCFL-218ENST00000608440 ZNF815PA8K554 130 aa9.84□□□□□ -0.83
CTCFL-218ENST00000608440 EFNA4P52798 201 aa9.84□□□□□ -0.83
CTCFL-218ENST00000608440 J3KT08 172 aa9.84□□□□□ -0.84
CTCFL-218ENST00000608440 ERHP84090 104 aaKnown RBP9.84□□□□□ -0.84
CTCFL-218ENST00000608440 SIGLEC9Q9Y336 463 aa9.84□□□□□ -0.84
CTCFL-218ENST00000608440 NDUFA7O95182 113 aa9.83□□□□□ -0.84
CTCFL-218ENST00000608440 TNFRSF6BO95407 300 aa9.83□□□□□ -0.84
CTCFL-218ENST00000608440 C10orf55Q5SWW7 151 aa9.83□□□□□ -0.84
CTCFL-218ENST00000608440 PRADC1Q9BSG0 188 aa9.83□□□□□ -0.84
CTCFL-218ENST00000608440 SPTBN2O15020 2390 aa9.83□□□□□ -0.84
CTCFL-218ENST00000608440 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
CTCFL-218ENST00000608440 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
CTCFL-218ENST00000608440 IGLC6P0CF74 106 aa9.83□□□□□ -0.84
CTCFL-218ENST00000608440 LOXL3P58215 753 aa9.83□□□□□ -0.84
CTCFL-218ENST00000608440 C17orf77Q96MU5 243 aa9.83□□□□□ -0.84
CTCFL-218ENST00000608440 ZNRD1Q9P1U0 126 aa9.83□□□□□ -0.84
CTCFL-218ENST00000608440 SAA1P0DJI8 122 aaPredicted RBP9.82□□□□□ -0.84
CTCFL-218ENST00000608440 MFAP4P55083 255 aa9.82□□□□□ -0.84
CTCFL-218ENST00000608440 KLHL30-AS1Q8NEE0 82 aa9.82□□□□□ -0.84
CTCFL-218ENST00000608440 BAALCQ8WXS3 180 aa9.82□□□□□ -0.84
CTCFL-218ENST00000608440 OTORQ9NRC9 128 aa9.82□□□□□ -0.84
CTCFL-218ENST00000608440 SSUH2Q9Y2M2 353 aa9.82□□□□□ -0.84
CTCFL-218ENST00000608440 ATP1A1-AS1Q5TC04 95 aa9.82□□□□□ -0.84
CTCFL-218ENST00000608440 CD177Q8N6Q3 437 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms