RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 CST7O76096 145 aa10.26□□□□□ -0.77
CTSA-216ENST00000607212 SLC25A5P05141 298 aaKnown RBP10.26□□□□□ -0.77
CTSA-216ENST00000607212 RNASE4P34096 147 aaKnown RBP10.26□□□□□ -0.77
CTSA-216ENST00000607212 BTCP35070 178 aa10.26□□□□□ -0.77
CTSA-216ENST00000607212 S100A10P60903 97 aa10.26□□□□□ -0.77
CTSA-216ENST00000607212 DAZ2Q13117 558 aaKnown RBP10.26□□□□□ -0.77
CTSA-216ENST00000607212 ERCC8Q13216 396 aa10.26□□□□□ -0.77
CTSA-216ENST00000607212 C20orf85Q9H1P6 137 aa10.26□□□□□ -0.77
CTSA-216ENST00000607212 UQCC1Q9NVA1 299 aa10.26□□□□□ -0.77
CTSA-216ENST00000607212 FUT9Q9Y231 359 aa10.26□□□□□ -0.77
CTSA-216ENST00000607212 A0A096LPF7 62 aa10.25□□□□□ -0.77
CTSA-216ENST00000607212 INMT-MINDY4F8WBC2 141 aa10.25□□□□□ -0.77
CTSA-216ENST00000607212 RGS13O14921 159 aa10.25□□□□□ -0.77
CTSA-216ENST00000607212 SIVA1O15304 175 aa10.25□□□□□ -0.77
CTSA-216ENST00000607212 IGHV3-53P01767 116 aa10.25□□□□□ -0.77
CTSA-216ENST00000607212 BTF3P20290 206 aaKnown RBP10.25□□□□□ -0.77
CTSA-216ENST00000607212 PVALBP20472 110 aaPredicted RBP10.25□□□□□ -0.77
CTSA-216ENST00000607212 BTN1A1Q13410 526 aa10.25□□□□□ -0.77
CTSA-216ENST00000607212 ZFP69Q49AA0 526 aa10.25□□□□□ -0.77
CTSA-216ENST00000607212 EIF4E3Q8N5X7 224 aaKnown RBP10.25□□□□□ -0.77
CTSA-216ENST00000607212 BLNKQ8WV28 456 aa10.25□□□□□ -0.77
CTSA-216ENST00000607212 MITD1Q8WV92 249 aa10.25□□□□□ -0.77
CTSA-216ENST00000607212 SAT2Q96F10 170 aaPredicted RBP10.25□□□□□ -0.77
CTSA-216ENST00000607212 ICOSQ9Y6W8 199 aa10.25□□□□□ -0.77
CTSA-216ENST00000607212 LRP1BQ9NZR2 4599 aa10.24□□□□□ -0.77
CTSA-216ENST00000607212 FAM24AA6NFZ4 105 aa10.24□□□□□ -0.77
CTSA-216ENST00000607212 M0R3E3 92 aa10.24□□□□□ -0.77
CTSA-216ENST00000607212 PAX4O43316 350 aa10.24□□□□□ -0.77
CTSA-216ENST00000607212 GPX1P07203 203 aa10.24□□□□□ -0.77
CTSA-216ENST00000607212 ERVFC1-1P60608 527 aa10.24□□□□□ -0.77
CTSA-216ENST00000607212 ARPC5LQ9BPX5 153 aa10.24□□□□□ -0.77
CTSA-216ENST00000607212 AAMDCQ9H7C9 122 aa10.24□□□□□ -0.77
CTSA-216ENST00000607212 EPM2AB3EWF7 344 aa10.23□□□□□ -0.77
CTSA-216ENST00000607212 MPDU1O75352 247 aa10.23□□□□□ -0.77
CTSA-216ENST00000607212 NXPH4O95158 308 aa10.23□□□□□ -0.77
CTSA-216ENST00000607212 FGF7P21781 194 aa10.23□□□□□ -0.77
CTSA-216ENST00000607212 TCTE3Q8IZS6 198 aa10.23□□□□□ -0.77
CTSA-216ENST00000607212 MRPL53Q96EL3 112 aaKnown RBP10.23□□□□□ -0.77
CTSA-216ENST00000607212 VSIG2Q96IQ7 327 aa10.23□□□□□ -0.77
CTSA-216ENST00000607212 LINC00477Q96M19 166 aa10.23□□□□□ -0.77
CTSA-216ENST00000607212 SLC39A9Q9NUM3 307 aa10.23□□□□□ -0.77
CTSA-216ENST00000607212 PRELID1Q9Y255 219 aa10.23□□□□□ -0.77
CTSA-216ENST00000607212 HIST1H1EP10412 219 aaKnown RBP10.22□□□□□ -0.77
CTSA-216ENST00000607212 FUSP35637 526 aaKnown RBP eCLIP10.22□□□□□ -0.77
CTSA-216ENST00000607212 TMEM78Q5T7P6 136 aa10.22□□□□□ -0.77
CTSA-216ENST00000607212 STX12Q86Y82 276 aa10.22□□□□□ -0.77
CTSA-216ENST00000607212 MRPL16Q9NX20 251 aaKnown RBP10.22□□□□□ -0.77
CTSA-216ENST00000607212 WDR83OSQ9Y284 106 aa10.22□□□□□ -0.77
CTSA-216ENST00000607212 KLF12Q9Y4X4 402 aa10.22□□□□□ -0.77
CTSA-216ENST00000607212 TRBV19A0A075B6N1 114 aa10.21□□□□□ -0.77
CTSA-216ENST00000607212 TRAV6A0A075B6T7 132 aa10.21□□□□□ -0.77
CTSA-216ENST00000607212 ZNF253O75346 499 aa10.21□□□□□ -0.77
CTSA-216ENST00000607212 PYYP10082 97 aa10.21□□□□□ -0.77
CTSA-216ENST00000607212 HBG1P69891 147 aa10.21□□□□□ -0.77
CTSA-216ENST00000607212 HBG2P69892 147 aa10.21□□□□□ -0.77
CTSA-216ENST00000607212 FAM122CQ6P4D5 195 aa10.21□□□□□ -0.77
CTSA-216ENST00000607212 EXOC3-AS1Q8N2X6 119 aa10.21□□□□□ -0.77
CTSA-216ENST00000607212 C11orf72Q8NBR9 251 aa10.21□□□□□ -0.77
CTSA-216ENST00000607212 GPN1Q9HCN4 374 aaPredicted RBP10.21□□□□□ -0.77
CTSA-216ENST00000607212 IGKV2-40A0A087WW87 121 aaPredicted RBP10.2□□□□□ -0.78
CTSA-216ENST00000607212 SPINK4O60575 86 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 IFNA5P01569 189 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 IGKV2D-40P01614 121 aaPredicted RBP10.2□□□□□ -0.78
CTSA-216ENST00000607212 TCRBP04435 133 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 S100A11P31949 105 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 RPL29P47914 159 aaKnown RBP10.2□□□□□ -0.78
CTSA-216ENST00000607212 SULT1A1P50225 295 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 TCL1AP56279 114 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 ICAM4Q14773 271 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 ANXA2RQ3ZCQ2 193 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 C8orf49Q96NF6 230 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 SEC22CQ9BRL7 303 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 AGPAT4-IT1Q9H0P7 198 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 PGPEP1Q9NXJ5 209 aa10.2□□□□□ -0.78
CTSA-216ENST00000607212 TRAV9-2A0A087WT02 112 aa10.19□□□□□ -0.78
CTSA-216ENST00000607212 TRGV4A0A0C4DH28 118 aa10.19□□□□□ -0.78
CTSA-216ENST00000607212 KLLNB2CW77 178 aa10.19□□□□□ -0.78
CTSA-216ENST00000607212 ZNF324O75467 553 aaPredicted RBP10.19□□□□□ -0.78
CTSA-216ENST00000607212 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
CTSA-216ENST00000607212 PCNPQ8WW12 178 aaKnown RBP10.19□□□□□ -0.78
CTSA-216ENST00000607212 C2orf50Q96LR7 162 aa10.19□□□□□ -0.78
CTSA-216ENST00000607212 TMEM14CQ9P0S9 112 aa10.19□□□□□ -0.78
CTSA-216ENST00000607212 PRO0255Q9UI72 69 aa10.19□□□□□ -0.78
CTSA-216ENST00000607212 TP53TG3Q9ULZ0 132 aa10.19□□□□□ -0.78
CTSA-216ENST00000607212 BOLA1Q9Y3E2 137 aa10.19□□□□□ -0.78
CTSA-216ENST00000607212 IGHV1OR15-1A0A075B7D0 117 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 E5RGE8 158 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 C1QBP02746 253 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 H2AFB2P0C5Z0 115 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 ZNF415Q09FC8 603 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 SLAQ13239 276 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 PDE6HQ13956 83 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 MRPL23Q16540 153 aaKnown RBP10.18□□□□□ -0.78
CTSA-216ENST00000607212 Q5BKY6 102 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 C18orf15Q96N68 181 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 LINC00467Q9BRT7 94 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 LYRM2Q9NU23 88 aaPredicted RBP10.18□□□□□ -0.78
CTSA-216ENST00000607212 HHLA3Q9XRX5 114 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 TNFRSF18Q9Y5U5 241 aa10.18□□□□□ -0.78
CTSA-216ENST00000607212 DNAH5Q8TE73 4624 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms