RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 RNASE4P34096 147 aaKnown RBP5.28□□□□□ -1.56
CUX1-219ENST00000606749 NHLH2Q02577 135 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 CD300CQ08708 224 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 PDE6HQ13956 83 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 GCSAMLQ5JQS6 135 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 MZT2BQ6NZ67 158 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 C9orf47Q6ZRZ4 202 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 Q6ZTI0 123 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 EXOC3-AS1Q8N2X6 119 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 BLNKQ8WV28 456 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 FAM19A4Q96LR4 140 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 LINC00467Q9BRT7 94 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 NPCDR1Q9BY65 106 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 KRTAP4-5Q9BYR2 181 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 TMPRSS5Q9H3S3 457 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 GPN1Q9HCN4 374 aaPredicted RBP5.28□□□□□ -1.56
CUX1-219ENST00000606749 GSN-AS1Q9NRJ2 163 aa5.28□□□□□ -1.56
CUX1-219ENST00000606749 C16orf90A8MZG2 172 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 SIX6O95475 246 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 NMBP08949 121 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 NBEAP1P0C6P0 100 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 BTN1A1Q13410 526 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 ASAH1Q13510 395 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 ICAM4Q14773 271 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 ANXA2RQ3ZCQ2 193 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 LINC00299Q6ZSB3 139 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 C11orf72Q8NBR9 251 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 THAP6Q8TBB0 222 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 FAM167A-AS1Q96KT0 104 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 C18orf15Q96N68 181 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 UPK3BQ9BT76 320 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 SLC25A2Q9BXI2 301 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 KRTAP1-5Q9BYS1 174 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 KLF12Q9Y4X4 402 aa5.27□□□□□ -1.57
CUX1-219ENST00000606749 TRGV2A0A075B6R0 118 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 IGKV2-40A0A087WW87 121 aaPredicted RBP5.26□□□□□ -1.57
CUX1-219ENST00000606749 A0A096LPF7 62 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 IGKV2D-40P01614 121 aaPredicted RBP5.26□□□□□ -1.57
CUX1-219ENST00000606749 GPX1P07203 203 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 CRISP2P16562 243 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 FAM122CQ6P4D5 195 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 Q6ZQT7 251 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 MIR17HGQ75NE6 70 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 EIF4E3Q8N5X7 224 aaKnown RBP5.26□□□□□ -1.57
CUX1-219ENST00000606749 ZFAND2AQ8N6M9 145 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 ZNF680Q8NEM1 530 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 OR5C1Q8NGR4 320 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 S100ZQ8WXG8 99 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 VSIG2Q96IQ7 327 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 VGLL1Q99990 258 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 NMES1Q9C002 83 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 SLC25A31Q9H0C2 315 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 OR51M1Q9H341 326 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 Q9H3A6 140 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 AAMDCQ9H7C9 122 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 TP53TG3Q9ULZ0 132 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 FUT9Q9Y231 359 aa5.26□□□□□ -1.57
CUX1-219ENST00000606749 MRPS16Q9Y3D3 137 aaKnown RBP5.26□□□□□ -1.57
CUX1-219ENST00000606749 TRGV1A0A0A0MS02 117 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 A0A1W2PPQ1 181 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 E5RGE8 158 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 H0YIZ8 118 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 SPINK4O60575 86 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 CDK2AP2O75956 126 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 TCL1AP56279 114 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 TTC32Q5I0X7 151 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 IBA57Q5T440 356 aaKnown RBP5.25□□□□□ -1.57
CUX1-219ENST00000606749 TMEM78Q5T7P6 136 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 PRR9Q5T870 116 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 FXYD5Q96DB9 178 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 PAXXQ9BUH6 204 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 WDR61Q9GZS3 305 aaKnown RBP5.25□□□□□ -1.57
CUX1-219ENST00000606749 OR5AC2Q9NZP5 309 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 ZNF492Q9P255 531 aa5.25□□□□□ -1.57
CUX1-219ENST00000606749 IGHV1OR15-1A0A075B7D0 117 aa5.24□□□□□ -1.57
CUX1-219ENST00000606749 TRBV7-9A0A0J9YWB2 115 aa5.24□□□□□ -1.57
CUX1-219ENST00000606749 RGS13O14921 159 aa5.24□□□□□ -1.57
CUX1-219ENST00000606749 UPK1BO75841 260 aa5.24□□□□□ -1.57
CUX1-219ENST00000606749 OR10J4P0C629 311 aa5.24□□□□□ -1.57
CUX1-219ENST00000606749 BTF3P20290 206 aaKnown RBP5.24□□□□□ -1.57
CUX1-219ENST00000606749 ZNF138P52744 262 aa5.24□□□□□ -1.57
CUX1-219ENST00000606749 CYCSP99999 105 aaKnown RBP5.24□□□□□ -1.57
CUX1-219ENST00000606749 IFITM3Q01628 133 aa5.24□□□□□ -1.57
CUX1-219ENST00000606749 LRRC37A5PQ49AS3 106 aa5.24□□□□□ -1.57
CUX1-219ENST00000606749 SPATA12Q7Z6I5 190 aa5.24□□□□□ -1.57
CUX1-219ENST00000606749 ENKURQ8TC29 256 aa5.24□□□□□ -1.57
CUX1-219ENST00000606749 ST6GAL2Q96JF0 529 aa5.24□□□□□ -1.57
CUX1-219ENST00000606749 MRPL32Q9BYC8 188 aaKnown RBP5.24□□□□□ -1.57
CUX1-219ENST00000606749 INMT-MINDY4F8WBC2 141 aa5.23□□□□□ -1.57
CUX1-219ENST00000606749 PAX4O43316 350 aa5.23□□□□□ -1.57
CUX1-219ENST00000606749 PRAF2O60831 178 aa5.23□□□□□ -1.57
CUX1-219ENST00000606749 IGHV3-53P01767 116 aa5.23□□□□□ -1.57
CUX1-219ENST00000606749 H2BFSP57053 126 aa5.23□□□□□ -1.57
CUX1-219ENST00000606749 RANP62826 216 aaKnown RBP5.23□□□□□ -1.57
CUX1-219ENST00000606749 LYPD1Q8N2G4 141 aa5.23□□□□□ -1.57
CUX1-219ENST00000606749 PPP1R1CQ8WVI7 109 aa5.23□□□□□ -1.57
CUX1-219ENST00000606749 PHYHIPLQ96FC7 376 aa5.23□□□□□ -1.57
CUX1-219ENST00000606749 KCNIP2Q9NS61 270 aa5.23□□□□□ -1.57
CUX1-219ENST00000606749 PRO0255Q9UI72 69 aa5.23□□□□□ -1.57
CUX1-219ENST00000606749 HHLA3Q9XRX5 114 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms