RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 DIRC3C9JPN6 131 aa10.36□□□□□ -0.75
CTSA-211ENST00000606066 SLC25A5P05141 298 aaKnown RBP10.36□□□□□ -0.75
CTSA-211ENST00000606066 CT45A10P0DMU9 189 aa10.36□□□□□ -0.75
CTSA-211ENST00000606066 FHITP49789 147 aa10.36□□□□□ -0.75
CTSA-211ENST00000606066 FGF8P55075 233 aaPredicted RBP10.36□□□□□ -0.75
CTSA-211ENST00000606066 ZNF705AQ6ZN79 300 aaPredicted RBP10.36□□□□□ -0.75
CTSA-211ENST00000606066 SFT2D1Q8WV19 159 aa10.36□□□□□ -0.75
CTSA-211ENST00000606066 MBD3L1Q8WWY6 194 aa10.36□□□□□ -0.75
CTSA-211ENST00000606066 TMEM208Q9BTX3 173 aa10.36□□□□□ -0.75
CTSA-211ENST00000606066 NKX6-2Q9C056 277 aaPredicted RBP10.36□□□□□ -0.75
CTSA-211ENST00000606066 AGPAT4-IT1Q9H0P7 198 aa10.36□□□□□ -0.75
CTSA-211ENST00000606066 PLA2G2EQ9NZK7 142 aa10.36□□□□□ -0.75
CTSA-211ENST00000606066 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
CTSA-211ENST00000606066 IGHV3OR16-12A0A075B7B8 117 aa10.35□□□□□ -0.75
CTSA-211ENST00000606066 IGKV2-40A0A087WW87 121 aaPredicted RBP10.35□□□□□ -0.75
CTSA-211ENST00000606066 SERTM2A0A1B0GWG4 89 aa10.35□□□□□ -0.75
CTSA-211ENST00000606066 SMIM9A6NGZ8 99 aa10.35□□□□□ -0.75
CTSA-211ENST00000606066 CRXO43186 299 aaPredicted RBP10.35□□□□□ -0.75
CTSA-211ENST00000606066 IGKV2D-40P01614 121 aaPredicted RBP10.35□□□□□ -0.75
CTSA-211ENST00000606066 H2AFB1P0C5Y9 115 aa10.35□□□□□ -0.75
CTSA-211ENST00000606066 ERCC8Q13216 396 aa10.35□□□□□ -0.75
CTSA-211ENST00000606066 C5orf17Q8NAS9 161 aa10.35□□□□□ -0.75
CTSA-211ENST00000606066 NEU1Q99519 415 aa10.35□□□□□ -0.75
CTSA-211ENST00000606066 AGRNO00468 2067 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 TRAV12-2A0A075B6T6 113 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 TRBV7-9A0A0J9YWB2 115 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 A0A0J9YWU9 116 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 TEX46H3BTG2 121 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 K7EQM0 130 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 NMBP08949 121 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 SULT1A2P50226 295 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 ZNF138P52744 262 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 NKX2-5P52952 324 aaPredicted RBP10.34□□□□□ -0.75
CTSA-211ENST00000606066 SUMO1P63165 101 aaKnown RBP10.34□□□□□ -0.75
CTSA-211ENST00000606066 TMEM256Q8N2U0 113 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 VGLL1Q99990 258 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 C20orf144Q9BQM9 153 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 C11orf68Q9H3H3 251 aaKnown RBP10.34□□□□□ -0.75
CTSA-211ENST00000606066 TMPRSS5Q9H3S3 457 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 RPH3ALQ9UNE2 315 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 X6R8D5 127 aa10.34□□□□□ -0.75
CTSA-211ENST00000606066 CSMD3Q7Z407 3707 aa10.33□□□□□ -0.76
CTSA-211ENST00000606066 LCE6AA0A183 80 aa10.33□□□□□ -0.76
CTSA-211ENST00000606066 HBE1P02100 147 aa10.33□□□□□ -0.76
CTSA-211ENST00000606066 PPT1P50897 306 aa10.33□□□□□ -0.76
CTSA-211ENST00000606066 C1orf158Q8N1D5 194 aa10.33□□□□□ -0.76
CTSA-211ENST00000606066 ZNF492Q9P255 531 aa10.33□□□□□ -0.76
CTSA-211ENST00000606066 IGHV4-28A0A0C4DH34 117 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 GGTLC3B5MD39 225 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 TCRAP04437 139 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 CRISP2P16562 243 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 UBE2G2P60604 165 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 GOLT1AQ6ZVE7 132 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 Q8NAQ8 132 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 FAM19A4Q96LR4 140 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 LINC01587Q99440 93 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 EPDR1Q9UM22 224 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 LENEPQ9Y5L5 61 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 ARL2-SNX15V9GYD0 113 aa10.32□□□□□ -0.76
CTSA-211ENST00000606066 PLECQ15149 4684 aaKnown RBP10.32□□□□□ -0.76
CTSA-211ENST00000606066 TMEM189A5PLL7 270 aa10.31□□□□□ -0.76
CTSA-211ENST00000606066 FBLL1A6NHQ2 334 aaKnown RBP10.31□□□□□ -0.76
CTSA-211ENST00000606066 FAM74A7A6NL05 159 aa10.31□□□□□ -0.76
CTSA-211ENST00000606066 H7BYZ3 331 aa10.31□□□□□ -0.76
CTSA-211ENST00000606066 J3KRW8 73 aa10.31□□□□□ -0.76
CTSA-211ENST00000606066 IFNA7P01567 189 aa10.31□□□□□ -0.76
CTSA-211ENST00000606066 GPX1P07203 203 aa10.31□□□□□ -0.76
CTSA-211ENST00000606066 GNG5P63218 68 aa10.31□□□□□ -0.76
CTSA-211ENST00000606066 RRN3P1Q2M238 152 aa10.31□□□□□ -0.76
CTSA-211ENST00000606066 GFI1BQ5VTD9 330 aa10.31□□□□□ -0.76
CTSA-211ENST00000606066 TCEAL7Q9BRU2 100 aa10.31□□□□□ -0.76
CTSA-211ENST00000606066 NIPSNAP3BQ9BS92 247 aa10.31□□□□□ -0.76
CTSA-211ENST00000606066 YTHDF2Q9Y5A9 579 aaKnown RBP10.31□□□□□ -0.76
CTSA-211ENST00000606066 TRAV1-1A0A0B4J248 108 aa10.3□□□□□ -0.76
CTSA-211ENST00000606066 A0A1B0GV50 99 aa10.3□□□□□ -0.76
CTSA-211ENST00000606066 KLLNB2CW77 178 aa10.3□□□□□ -0.76
CTSA-211ENST00000606066 F6UZH7 168 aa10.3□□□□□ -0.76
CTSA-211ENST00000606066 TAS2R60P59551 318 aa10.3□□□□□ -0.76
CTSA-211ENST00000606066 CST9LP1Q5W188 147 aa10.3□□□□□ -0.76
CTSA-211ENST00000606066 CYB561D1Q8N8Q1 229 aa10.3□□□□□ -0.76
CTSA-211ENST00000606066 HIST1H2BAQ96A08 127 aa10.3□□□□□ -0.76
CTSA-211ENST00000606066 ATG101Q9BSB4 218 aa10.3□□□□□ -0.76
CTSA-211ENST00000606066 TRAV12-3A0A0B4J271 114 aa10.29□□□□□ -0.76
CTSA-211ENST00000606066 C7orf71A4D174 169 aa10.29□□□□□ -0.76
CTSA-211ENST00000606066 DEFB4AO15263 64 aa10.29□□□□□ -0.76
CTSA-211ENST00000606066 RBMY1A1P0DJD3 496 aaKnown RBP10.29□□□□□ -0.76
CTSA-211ENST00000606066 RBMY1CP0DJD4 496 aa10.29□□□□□ -0.76
CTSA-211ENST00000606066 KIR3DS1Q14943 382 aa10.29□□□□□ -0.76
CTSA-211ENST00000606066 RBMY1FQ15415 496 aaKnown RBP10.29□□□□□ -0.76
CTSA-211ENST00000606066 Q8TAT8 98 aa10.29□□□□□ -0.76
CTSA-211ENST00000606066 NDFIP1Q9BT67 221 aa10.29□□□□□ -0.76
CTSA-211ENST00000606066 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
CTSA-211ENST00000606066 HYDINQ4G0P3 5121 aa10.28□□□□□ -0.76
CTSA-211ENST00000606066 LOC102723971A0A1B0GUV8 181 aa10.28□□□□□ -0.76
CTSA-211ENST00000606066 PAGE4O60829 102 aa10.28□□□□□ -0.76
CTSA-211ENST00000606066 RNASE4P34096 147 aaKnown RBP10.28□□□□□ -0.76
CTSA-211ENST00000606066 ALKAL2Q6UX46 152 aa10.28□□□□□ -0.76
CTSA-211ENST00000606066 CCDC28AQ8IWP9 274 aa10.28□□□□□ -0.76
CTSA-211ENST00000606066 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms