RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 ZNF324O75467 553 aaPredicted RBP6.59□□□□□ -1.35
VRK3-224ENST00000601849 NXPH4O95158 308 aa6.59□□□□□ -1.35
VRK3-224ENST00000601849 NMBP08949 121 aa6.59□□□□□ -1.35
VRK3-224ENST00000601849 EVI2AP22794 236 aa6.59□□□□□ -1.35
VRK3-224ENST00000601849 S100A11P31949 105 aa6.59□□□□□ -1.35
VRK3-224ENST00000601849 RNASE4P34096 147 aaKnown RBP6.59□□□□□ -1.35
VRK3-224ENST00000601849 HBG1P69891 147 aa6.59□□□□□ -1.35
VRK3-224ENST00000601849 HBG2P69892 147 aa6.59□□□□□ -1.35
VRK3-224ENST00000601849 IBA57Q5T440 356 aaKnown RBP6.59□□□□□ -1.35
VRK3-224ENST00000601849 TMEM78Q5T7P6 136 aa6.59□□□□□ -1.35
VRK3-224ENST00000601849 MITD1Q8WV92 249 aa6.59□□□□□ -1.35
VRK3-224ENST00000601849 VSIG2Q96IQ7 327 aa6.59□□□□□ -1.35
VRK3-224ENST00000601849 MGST2Q99735 147 aa6.59□□□□□ -1.35
VRK3-224ENST00000601849 UQCC1Q9NVA1 299 aa6.59□□□□□ -1.35
VRK3-224ENST00000601849 TRBV19A0A075B6N1 114 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 TRAV5A0A0B4J249 113 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 LINC00854A0A1B0GVQ3 168 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 C5orf51A6NDU8 294 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 FAM25EA8MYX2 175 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 SPINK4O60575 86 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 MBPP02686 304 aaPredicted RBP6.58□□□□□ -1.36
VRK3-224ENST00000601849 RPL29P47914 159 aaKnown RBP6.58□□□□□ -1.36
VRK3-224ENST00000601849 BAXQ07812 192 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 PDE6HQ13956 83 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 NEGR1Q7Z3B1 354 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 STX12Q86Y82 276 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 PCNPQ8WW12 178 aaKnown RBP6.58□□□□□ -1.36
VRK3-224ENST00000601849 S100ZQ8WXG8 99 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 ST6GAL2Q96JF0 529 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 GPN1Q9HCN4 374 aaPredicted RBP6.58□□□□□ -1.36
VRK3-224ENST00000601849 FLVCR2Q9UPI3 526 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 RCL1Q9Y2P8 373 aaKnown RBP6.58□□□□□ -1.36
VRK3-224ENST00000601849 LSM5Q9Y4Y9 91 aaKnown RBP6.58□□□□□ -1.36
VRK3-224ENST00000601849 LY96Q9Y6Y9 160 aa6.58□□□□□ -1.36
VRK3-224ENST00000601849 TRGV4A0A0C4DH28 118 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 FAM229AH3BQW9 127 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 CST7O76096 145 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 IL7P13232 177 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 TCL1AP56279 114 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 ARL16Q0P5N6 197 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 ERCC8Q13216 396 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 ATP6V1FQ16864 119 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 MORN5Q5VZ52 161 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 LYPD5Q6UWN5 251 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 LYPD1Q8N2G4 141 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 SLC39A9Q9NUM3 307 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 TMEM14CQ9P0S9 112 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 WDR83OSQ9Y284 106 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 BOLA1Q9Y3E2 137 aa6.57□□□□□ -1.36
VRK3-224ENST00000601849 IGHV1OR15-1A0A075B7D0 117 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 KLLNB2CW77 178 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 PRAF2O60831 178 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 IGHV3-53P01767 116 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 ORM1P02763 201 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 CRISP2P16562 243 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 SRIP30626 198 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 CSN1S1P47710 185 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 CRYBA4P53673 196 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 ZNF415Q09FC8 603 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 BTN1A1Q13410 526 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 MIC13Q5XKP0 118 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 C9orf47Q6ZRZ4 202 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 C11orf72Q8NBR9 251 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 BLNKQ8WV28 456 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 CCDC32Q9BV29 185 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 AGPAT4-IT1Q9H0P7 198 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 KLF12Q9Y4X4 402 aa6.56□□□□□ -1.36
VRK3-224ENST00000601849 UBE2L5PA0A1B0GUS4 154 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 E5RGE8 158 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 M0R3E3 92 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 PLA2G10O15496 165 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 PSCAO43653 123 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 BTCP35070 178 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 SULT1A1P50225 295 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 CD300CQ08708 224 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 ICAM4Q14773 271 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 Q6ZRN7 208 aaPredicted RBP6.55□□□□□ -1.36
VRK3-224ENST00000601849 C10orf126Q8N4M7 172 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 CHAC2Q8WUX2 184 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 C2orf50Q96LR7 162 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 VGLL1Q99990 258 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 TXNDC17Q9BRA2 123 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 MRPL32Q9BYC8 188 aaKnown RBP6.55□□□□□ -1.36
VRK3-224ENST00000601849 MSRB1Q9NZV6 116 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 FAT1Q14517 4588 aa6.55□□□□□ -1.36
VRK3-224ENST00000601849 A0A087WTM6 91 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 TRBV7-9A0A0J9YWB2 115 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 FAM24AA6NFZ4 105 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 NBEAP1P0C6P0 100 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 FGF7P21781 194 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 GCSHP23434 173 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 ZNF138P52744 262 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 S100A10P60903 97 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 VWC2Q2TAL6 325 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 Q5VSD8 79 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 FAM122CQ6P4D5 195 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 FAM159AQ6UWV7 190 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 SH2D6Q7Z4S9 175 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 IQCF2Q8IXL9 164 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 EXOC3-AS1Q8N2X6 119 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms