RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 RPRMQ9NS64 109 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 HLA-DRB4X5D2U9 266 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 FAT1Q14517 4588 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 TEX48A0A1B0GUV7 120 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 UMAD1C9J7I0 102 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 EIF3GO75821 320 aaKnown RBP eCLIP6.98□□□□□ -1.29
HIF3A-219ENST00000600879 HBE1P02100 147 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 PRM2P04554 102 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 TAS2R45P59539 299 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 KHDC3LQ587J8 217 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 Q5VSD8 79 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 ALKAL2Q6UX46 152 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 BPIFA4PQ86YQ2 179 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 FAM213BQ8TBF2 198 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 LINC00052Q96N35 136 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 SLC25A2Q9BXI2 301 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 ACTR3CQ9C0K3 210 aaPredicted RBP6.98□□□□□ -1.29
HIF3A-219ENST00000600879 NRN1Q9NPD7 142 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 MDFICQ9P1T7 246 aa6.98□□□□□ -1.29
HIF3A-219ENST00000600879 CTXND1A0A1B0GTU2 59 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 HMGB3O15347 200 aaKnown RBP6.97□□□□□ -1.29
HIF3A-219ENST00000600879 OR7C2O60412 319 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 SULT1A2P50226 295 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 DPPA3Q6W0C5 159 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 C1orf158Q8N1D5 194 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 RAB24Q969Q5 203 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 PHYHIPLQ96FC7 376 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 FAM167A-AS1Q96KT0 104 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 C18orf15Q96N68 181 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 OR51M1Q9H341 326 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 GOLT1BQ9Y3E0 138 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 LINC00588Q9Y4M8 146 aa6.97□□□□□ -1.29
HIF3A-219ENST00000600879 F5H768 121 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 F6UB75 175 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 MRPS12O15235 138 aaKnown RBP6.96□□□□□ -1.3
HIF3A-219ENST00000600879 SNRPCP09234 159 aaKnown RBP6.96□□□□□ -1.3
HIF3A-219ENST00000600879 DEFB130BP0DP73 79 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 DEFB130AP0DP74 79 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 PYYP10082 97 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 RAB5CP51148 216 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 ZNF726P1Q15940 193 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 RRN3P1Q2M238 152 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 FAM74A1Q5RGS3 127 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 LCN15Q6UWW0 184 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 SSX7Q7RTT5 188 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 PAXXQ9BUH6 204 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 KRTAP1-5Q9BYS1 174 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 TMEM14CQ9P0S9 112 aa6.96□□□□□ -1.3
HIF3A-219ENST00000600879 FLG2Q5D862 2391 aaPredicted RBP6.96□□□□□ -1.3
HIF3A-219ENST00000600879 A0A087X0K7 114 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 MAP1LC3B2A6NCE7 125 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 H3BTX0 84 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 CXorf1O96002 111 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 SMR3BP02814 79 aaPredicted RBP6.95□□□□□ -1.3
HIF3A-219ENST00000600879 OR10J4P0C629 311 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 STAG3L2P0CL84 134 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 STAG3L3P0CL85 134 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 ARL14EPLP0DKL9 152 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 HIST1H1EP10412 219 aaKnown RBP6.95□□□□□ -1.3
HIF3A-219ENST00000600879 FHITP49789 147 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 MEOX2P50222 304 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 CCL18P55774 89 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 XGP55808 180 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 UBE2L3P68036 154 aaKnown RBP6.95□□□□□ -1.3
HIF3A-219ENST00000600879 HAMPP81172 84 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 PQLC2Q6ZP29 291 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 IQCF2Q8IXL9 164 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 LRRC20Q8TCA0 184 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 RNF141Q8WVD5 230 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 TMEM208Q9BTX3 173 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 MAP1LC3BQ9GZQ8 125 aa6.95□□□□□ -1.3
HIF3A-219ENST00000600879 SAV1Q9H4B6 383 aaPredicted RBP6.95□□□□□ -1.3
HIF3A-219ENST00000600879 ZNF705GA8MUZ8 300 aaPredicted RBP6.94□□□□□ -1.3
HIF3A-219ENST00000600879 H3BQ15 152 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 H2AFB1P0C5Y9 115 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 NBEAP1P0C6P0 100 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 IGLC2P0DOY2 106 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 ID1P41134 155 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 FGF8P55075 233 aaPredicted RBP6.94□□□□□ -1.3
HIF3A-219ENST00000600879 PSG9Q00887 426 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 GUK1Q16774 197 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 TEX261Q6UWH6 196 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 LYPD1Q8N2G4 141 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 SFT2D1Q8WV19 159 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 BLNKQ8WV28 456 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 ZNF503Q96F45 646 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 C16orf92Q96LL3 132 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 C17orf77Q96MU5 243 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 Q9H8V8 135 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 ZNF586Q9NXT0 402 aa6.94□□□□□ -1.3
HIF3A-219ENST00000600879 A0A1B0GV50 99 aa6.93□□□□□ -1.3
HIF3A-219ENST00000600879 TEX46H3BTG2 121 aa6.93□□□□□ -1.3
HIF3A-219ENST00000600879 IFNA7P01567 189 aa6.93□□□□□ -1.3
HIF3A-219ENST00000600879 GCHFRP30047 84 aa6.93□□□□□ -1.3
HIF3A-219ENST00000600879 FOXI2Q6ZQN5 318 aa6.93□□□□□ -1.3
HIF3A-219ENST00000600879 ZNF680Q8NEM1 530 aa6.93□□□□□ -1.3
HIF3A-219ENST00000600879 MBD3L1Q8WWY6 194 aa6.93□□□□□ -1.3
HIF3A-219ENST00000600879 FXYD5Q96DB9 178 aa6.93□□□□□ -1.3
HIF3A-219ENST00000600879 SLC50A1Q9BRV3 221 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms