RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 CKS2P33552 79 aa15.66■□□□□ 0.1
SHKBP1-225ENST00000600733 FAM110DQ8TAY7 271 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-225ENST00000600733 ZFAND3Q9H8U3 227 aa15.65■□□□□ 0.1
SHKBP1-225ENST00000600733 IGHV3OR16-13A0A075B7E8 117 aa15.65■□□□□ 0.1
SHKBP1-225ENST00000600733 IGHV3-74A0A0B4J1X5 117 aa15.65■□□□□ 0.1
SHKBP1-225ENST00000600733 FBLL1A6NHQ2 334 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-225ENST00000600733 LINC01548A6NM66 108 aa15.64■□□□□ 0.09
SHKBP1-225ENST00000600733 G3V318 75 aa15.64■□□□□ 0.09
SHKBP1-225ENST00000600733 SAA4P35542 130 aa15.64■□□□□ 0.09
SHKBP1-225ENST00000600733 RPS20P60866 119 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-225ENST00000600733 CELSR1Q9NYQ6 3014 aa15.64■□□□□ 0.09
SHKBP1-225ENST00000600733 TAX1BP3O14907 124 aa15.64■□□□□ 0.09
SHKBP1-225ENST00000600733 BUB3O43684 328 aa15.64■□□□□ 0.09
SHKBP1-225ENST00000600733 COX8AP10176 69 aa15.64■□□□□ 0.09
SHKBP1-225ENST00000600733 C12orf54Q6X4T0 127 aa15.64■□□□□ 0.09
SHKBP1-225ENST00000600733 IGHV2-70DA0A0C4DH43 119 aa15.63■□□□□ 0.09
SHKBP1-225ENST00000600733 UCNP55089 124 aa15.63■□□□□ 0.09
SHKBP1-225ENST00000600733 PAX8Q06710 450 aa15.63■□□□□ 0.09
SHKBP1-225ENST00000600733 CLEC19AQ6UXS0 136 aa15.63■□□□□ 0.09
SHKBP1-225ENST00000600733 PSMG3-AS1Q96PY0 264 aa15.63■□□□□ 0.09
SHKBP1-225ENST00000600733 UBE2E1P51965 193 aa15.63■□□□□ 0.09
SHKBP1-225ENST00000600733 TCTAP57738 103 aa15.63■□□□□ 0.09
SHKBP1-225ENST00000600733 HIST1H1AQ02539 215 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-225ENST00000600733 C2orf91Q6ZV80 131 aa15.63■□□□□ 0.09
SHKBP1-225ENST00000600733 CCDC140Q96MF4 163 aa15.63■□□□□ 0.09
SHKBP1-225ENST00000600733 UBTD1Q9HAC8 227 aa15.63■□□□□ 0.09
SHKBP1-225ENST00000600733 SPTBN4Q9H254 2564 aa15.62■□□□□ 0.09
SHKBP1-225ENST00000600733 CLPSL1A2RUU4 121 aa15.62■□□□□ 0.09
SHKBP1-225ENST00000600733 GAS8-AS1O95177 125 aa15.62■□□□□ 0.09
SHKBP1-225ENST00000600733 HBDP02042 147 aa15.62■□□□□ 0.09
SHKBP1-225ENST00000600733 CACNG7P62955 275 aa15.62■□□□□ 0.09
SHKBP1-225ENST00000600733 ANKRD39Q53RE8 183 aa15.62■□□□□ 0.09
SHKBP1-225ENST00000600733 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.62■□□□□ 0.09
SHKBP1-225ENST00000600733 IL17RELQ6ZVW7 336 aa15.62■□□□□ 0.09
SHKBP1-225ENST00000600733 IGHV3-49A0A0A0MS15 119 aa15.61■□□□□ 0.09
SHKBP1-225ENST00000600733 FABP5P3A8MUU1 101 aa15.61■□□□□ 0.09
SHKBP1-225ENST00000600733 PPIFP30405 207 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-225ENST00000600733 NHLH1Q02575 133 aa15.61■□□□□ 0.09
SHKBP1-225ENST00000600733 VAMP3Q15836 100 aa15.61■□□□□ 0.09
SHKBP1-225ENST00000600733 PRSS57Q6UWY2 283 aa15.61■□□□□ 0.09
SHKBP1-225ENST00000600733 DEFB125Q8N687 156 aa15.61■□□□□ 0.09
SHKBP1-225ENST00000600733 RNF185Q96GF1 192 aa15.61■□□□□ 0.09
SHKBP1-225ENST00000600733 VPS13CQ709C8 3753 aa15.6■□□□□ 0.09
SHKBP1-225ENST00000600733 WFDC3Q8IUB2 231 aa15.6■□□□□ 0.09
SHKBP1-225ENST00000600733 ZNF207O43670 478 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-225ENST00000600733 PPP1R14DQ9NXH3 145 aa15.6■□□□□ 0.09
SHKBP1-225ENST00000600733 GOSR1O95249 250 aa15.59■□□□□ 0.09
SHKBP1-225ENST00000600733 S100A7P31151 101 aa15.59■□□□□ 0.09
SHKBP1-225ENST00000600733 LGALS9BQ3B8N2 356 aa15.59■□□□□ 0.09
SHKBP1-225ENST00000600733 LGALS9CQ6DKI2 356 aa15.59■□□□□ 0.09
SHKBP1-225ENST00000600733 BPESC1Q9GZL8 116 aa15.59■□□□□ 0.09
SHKBP1-225ENST00000600733 NCOR2Q9Y618 2525 aa15.59■□□□□ 0.09
SHKBP1-225ENST00000600733 CHD8Q9HCK8 2581 aa15.59■□□□□ 0.09
SHKBP1-225ENST00000600733 CBY3A6NI87 242 aa15.59■□□□□ 0.09
SHKBP1-225ENST00000600733 CNFNQ9BYD5 112 aa15.59■□□□□ 0.09
SHKBP1-225ENST00000600733 FGF6P10767 208 aa15.58■□□□□ 0.08
SHKBP1-225ENST00000600733 SRSF2Q01130 221 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-225ENST00000600733 IFI27L1Q96BM0 104 aa15.58■□□□□ 0.08
SHKBP1-225ENST00000600733 RAB9AP51151 201 aa15.57■□□□□ 0.08
SHKBP1-225ENST00000600733 LMO4P61968 165 aa15.57■□□□□ 0.08
SHKBP1-225ENST00000600733 LINC01559Q495D7 138 aa15.57■□□□□ 0.08
SHKBP1-225ENST00000600733 OR4C5Q8NGB2 326 aa15.57■□□□□ 0.08
SHKBP1-225ENST00000600733 RNASE8Q8TDE3 154 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-225ENST00000600733 AGPAT4-IT1Q9H0P7 198 aa15.57■□□□□ 0.08
SHKBP1-225ENST00000600733 CENPVL3A0A0U1RRI6 287 aa15.56■□□□□ 0.08
SHKBP1-225ENST00000600733 EVI2AP22794 236 aa15.56■□□□□ 0.08
SHKBP1-225ENST00000600733 EFNA4P52798 201 aa15.56■□□□□ 0.08
SHKBP1-225ENST00000600733 C11orf21Q9P2W6 132 aa15.56■□□□□ 0.08
SHKBP1-225ENST00000600733 IGKV3D-20A0A0C4DH25 116 aa15.56■□□□□ 0.08
SHKBP1-225ENST00000600733 KLK9Q2XQG4 91 aa15.56■□□□□ 0.08
SHKBP1-225ENST00000600733 TMEM219Q86XT9 240 aa15.56■□□□□ 0.08
SHKBP1-225ENST00000600733 C18orf15Q96N68 181 aa15.56■□□□□ 0.08
SHKBP1-225ENST00000600733 SLC50A1Q9BRV3 221 aa15.56■□□□□ 0.08
SHKBP1-225ENST00000600733 KLK9Q9UKQ9 250 aa15.56■□□□□ 0.08
SHKBP1-225ENST00000600733 TRAV8-2A0A0B4J237 113 aa15.55■□□□□ 0.08
SHKBP1-225ENST00000600733 GATA1P15976 413 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-225ENST00000600733 MAP1LC3AQ9H492 121 aa15.55■□□□□ 0.08
SHKBP1-225ENST00000600733 RBAKDNA6NC62 111 aa15.55■□□□□ 0.08
SHKBP1-225ENST00000600733 NPFFO15130 113 aa15.55■□□□□ 0.08
SHKBP1-225ENST00000600733 DPF1Q92782 380 aa15.55■□□□□ 0.08
SHKBP1-225ENST00000600733 EEF1AKMT3Q96AZ1 226 aa15.55■□□□□ 0.08
SHKBP1-225ENST00000600733 DKK2Q9UBU2 259 aa15.54■□□□□ 0.08
SHKBP1-225ENST00000600733 LINC00527Q9UJ94 153 aa15.54■□□□□ 0.08
SHKBP1-225ENST00000600733 CD5LO43866 347 aa15.54■□□□□ 0.08
SHKBP1-225ENST00000600733 TNFRSF6BO95407 300 aa15.54■□□□□ 0.08
SHKBP1-225ENST00000600733 SFTPCP11686 197 aa15.54■□□□□ 0.08
SHKBP1-225ENST00000600733 Q6ZQT7 251 aa15.54■□□□□ 0.08
SHKBP1-225ENST00000600733 METTL26Q96S19 204 aa15.54■□□□□ 0.08
SHKBP1-225ENST00000600733 IGHV3OR16-10A0A075B7F0 116 aa15.53■□□□□ 0.08
SHKBP1-225ENST00000600733 PPBPP02775 128 aa15.53■□□□□ 0.08
SHKBP1-225ENST00000600733 LY6DQ14210 128 aa15.53■□□□□ 0.08
SHKBP1-225ENST00000600733 C8orf86Q6ZUL3 223 aa15.53■□□□□ 0.08
SHKBP1-225ENST00000600733 C5orf56Q8N8D9 126 aa15.53■□□□□ 0.08
SHKBP1-225ENST00000600733 TMEM97Q5BJF2 176 aa15.52■□□□□ 0.08
SHKBP1-225ENST00000600733 AMMECR1LQ6DCA0 310 aa15.52■□□□□ 0.08
SHKBP1-225ENST00000600733 OR1N2Q8NGR9 330 aa15.52■□□□□ 0.08
SHKBP1-225ENST00000600733 TRGV3P03979 118 aa15.52■□□□□ 0.07
SHKBP1-225ENST00000600733 LEPP41159 167 aa15.52■□□□□ 0.07
SHKBP1-225ENST00000600733 BOD1L2Q8IYS8 172 aa15.52■□□□□ 0.07
SHKBP1-225ENST00000600733 CBY1Q9Y3M2 126 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms