RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 IGKV1-39P01597 117 aa2.57□□□□□ -2
HERC3-213ENST00000598772 IGKV1D-39P04432 117 aa2.57□□□□□ -2
HERC3-213ENST00000598772 HOXB5P09067 269 aa2.57□□□□□ -2
HERC3-213ENST00000598772 S100GP29377 79 aa2.57□□□□□ -2
HERC3-213ENST00000598772 SS18Q15532 418 aa2.57□□□□□ -2
HERC3-213ENST00000598772 RHOHQ15669 191 aa2.57□□□□□ -2
HERC3-213ENST00000598772 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
HERC3-213ENST00000598772 ACOT7LQ6ZUV0 252 aa2.57□□□□□ -2
HERC3-213ENST00000598772 LINC00173Q6ZV60 143 aa2.57□□□□□ -2
HERC3-213ENST00000598772 LGI3Q8N145 548 aa2.57□□□□□ -2
HERC3-213ENST00000598772 BEST4Q8NFU0 473 aa2.57□□□□□ -2
HERC3-213ENST00000598772 GABARAPL3Q9BY60 117 aa2.57□□□□□ -2
HERC3-213ENST00000598772 GFRA4Q9GZZ7 299 aa2.57□□□□□ -2
HERC3-213ENST00000598772 MRPS18AQ9NVS2 196 aaKnown RBP2.57□□□□□ -2
HERC3-213ENST00000598772 ARGLU1Q9NWB6 273 aaPredicted RBP2.57□□□□□ -2
HERC3-213ENST00000598772 RAB21Q9UL25 225 aa2.57□□□□□ -2
HERC3-213ENST00000598772 PAIP2BQ9ULR5 123 aaKnown RBP2.57□□□□□ -2
HERC3-213ENST00000598772 IGLV10-54A0A075B6I4 117 aa2.56□□□□□ -2
HERC3-213ENST00000598772 A0A096LNI7 61 aa2.56□□□□□ -2
HERC3-213ENST00000598772 MEIS3P1A6NDR6 274 aa2.56□□□□□ -2
HERC3-213ENST00000598772 AQP12BA6NM10 295 aa2.56□□□□□ -2
HERC3-213ENST00000598772 GPR31O00270 319 aa2.56□□□□□ -2
HERC3-213ENST00000598772 CASQ2O14958 399 aaPredicted RBP2.56□□□□□ -2
HERC3-213ENST00000598772 SSX5O60225 188 aa2.56□□□□□ -2
HERC3-213ENST00000598772 OR5G3P0C626 314 aa2.56□□□□□ -2
HERC3-213ENST00000598772 RPL7P18124 248 aaKnown RBP2.56□□□□□ -2
HERC3-213ENST00000598772 S100A7P31151 101 aa2.56□□□□□ -2
HERC3-213ENST00000598772 C2orf83Q53S99 150 aa2.56□□□□□ -2
HERC3-213ENST00000598772 GGNBP1Q5YKI7 109 aa2.56□□□□□ -2
HERC3-213ENST00000598772 PRR27Q6MZM9 219 aa2.56□□□□□ -2
HERC3-213ENST00000598772 ATRAIDQ6UW56 229 aa2.56□□□□□ -2
HERC3-213ENST00000598772 AQP12AQ8IXF9 295 aa2.56□□□□□ -2
HERC3-213ENST00000598772 CYB561D1Q8N8Q1 229 aa2.56□□□□□ -2
HERC3-213ENST00000598772 OR10G9Q8NGN4 311 aa2.56□□□□□ -2
HERC3-213ENST00000598772 CYGBQ8WWM9 190 aa2.56□□□□□ -2
HERC3-213ENST00000598772 RASL10AQ92737 203 aa2.56□□□□□ -2
HERC3-213ENST00000598772 GFI1Q99684 422 aa2.56□□□□□ -2
HERC3-213ENST00000598772 SLC50A1Q9BRV3 221 aa2.56□□□□□ -2
HERC3-213ENST00000598772 ZNF2Q9BSG1 426 aaPredicted RBP2.56□□□□□ -2
HERC3-213ENST00000598772 SPXQ9BT56 116 aa2.56□□□□□ -2
HERC3-213ENST00000598772 DIABLOQ9NR28 239 aa2.56□□□□□ -2
HERC3-213ENST00000598772 NAGKQ9UJ70 344 aa2.56□□□□□ -2
HERC3-213ENST00000598772 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
HERC3-213ENST00000598772 IGKV1D-37A0A075B6S9 117 aa2.55□□□□□ -2
HERC3-213ENST00000598772 A0A087WZ39 114 aa2.55□□□□□ -2
HERC3-213ENST00000598772 PMS2P5A8MQ11 134 aa2.55□□□□□ -2
HERC3-213ENST00000598772 ANKRD65E5RJM6 399 aa2.55□□□□□ -2
HERC3-213ENST00000598772 INS-IGF2F8WCM5 200 aa2.55□□□□□ -2
HERC3-213ENST00000598772 IGKV1-5P01602 117 aa2.55□□□□□ -2
HERC3-213ENST00000598772 IGLV7-43P04211 117 aa2.55□□□□□ -2
HERC3-213ENST00000598772 OR4E1P0C645 316 aa2.55□□□□□ -2
HERC3-213ENST00000598772 HSMCR30P0CW71 290 aa2.55□□□□□ -2
HERC3-213ENST00000598772 RPS10P46783 165 aaKnown RBP2.55□□□□□ -2
HERC3-213ENST00000598772 SPCS3P61009 180 aa2.55□□□□□ -2
HERC3-213ENST00000598772 RAP2BP61225 183 aa2.55□□□□□ -2
HERC3-213ENST00000598772 ARL6IP1Q15041 203 aa2.55□□□□□ -2
HERC3-213ENST00000598772 BAK1Q16611 211 aa2.55□□□□□ -2
HERC3-213ENST00000598772 GUK1Q16774 197 aa2.55□□□□□ -2
HERC3-213ENST00000598772 BSXQ3C1V8 233 aa2.55□□□□□ -2
HERC3-213ENST00000598772 COX6B2Q6YFQ2 88 aa2.55□□□□□ -2
HERC3-213ENST00000598772 OR2T35Q8NGX2 323 aa2.55□□□□□ -2
HERC3-213ENST00000598772 RHOXF1Q8NHV9 184 aa2.55□□□□□ -2
HERC3-213ENST00000598772 TYMSOSQ8TAI1 123 aa2.55□□□□□ -2
HERC3-213ENST00000598772 OPRPNQ99935 248 aaPredicted RBP2.55□□□□□ -2
HERC3-213ENST00000598772 C8orf4Q9NR00 106 aa2.55□□□□□ -2
HERC3-213ENST00000598772 V9GY05 133 aa2.55□□□□□ -2
HERC3-213ENST00000598772 TRBV6-4A0A1B0GX49 114 aa2.54□□□□□ -2
HERC3-213ENST00000598772 M0R2P5 195 aa2.54□□□□□ -2
HERC3-213ENST00000598772 RGS10O43665 173 aa2.54□□□□□ -2
HERC3-213ENST00000598772 ZNF253O75346 499 aa2.54□□□□□ -2
HERC3-213ENST00000598772 PMP2P02689 132 aa2.54□□□□□ -2
HERC3-213ENST00000598772 KRTAP1-4P0C5Y4 121 aa2.54□□□□□ -2
HERC3-213ENST00000598772 HOXB6P17509 224 aaKnown RBP2.54□□□□□ -2
HERC3-213ENST00000598772 RANBP1P43487 201 aa2.54□□□□□ -2
HERC3-213ENST00000598772 UBE2MP61081 183 aaKnown RBP2.54□□□□□ -2
HERC3-213ENST00000598772 MIAQ16674 131 aa2.54□□□□□ -2
HERC3-213ENST00000598772 ZNF876PQ49A33 203 aa2.54□□□□□ -2
HERC3-213ENST00000598772 HIGD2BQ4VC39 106 aa2.54□□□□□ -2
HERC3-213ENST00000598772 TMEM170AQ8WVE7 144 aa2.54□□□□□ -2
HERC3-213ENST00000598772 TMEM80Q96HE8 168 aa2.54□□□□□ -2
HERC3-213ENST00000598772 KCNS1Q96KK3 526 aa2.54□□□□□ -2
HERC3-213ENST00000598772 SAMD10Q9BYL1 202 aa2.54□□□□□ -2
HERC3-213ENST00000598772 SRRQ9GZT4 340 aa2.54□□□□□ -2
HERC3-213ENST00000598772 FAM107BQ9H098 131 aa2.54□□□□□ -2
HERC3-213ENST00000598772 GABARAPL1Q9H0R8 117 aa2.54□□□□□ -2
HERC3-213ENST00000598772 AUNIPQ9H7T9 357 aa2.54□□□□□ -2
HERC3-213ENST00000598772 ZNF331Q9NQX6 463 aaPredicted RBP2.54□□□□□ -2
HERC3-213ENST00000598772 LINC00474Q9P2X8 69 aa2.54□□□□□ -2
HERC3-213ENST00000598772 HIGD1AQ9Y241 93 aa2.54□□□□□ -2
HERC3-213ENST00000598772 MUC12Q9UKN1 5478 aa2.54□□□□□ -2
HERC3-213ENST00000598772 IRGMA1A4Y4 181 aa2.53□□□□□ -2
HERC3-213ENST00000598772 MYL12BO14950 172 aa2.53□□□□□ -2
HERC3-213ENST00000598772 GNRH2O43555 120 aa2.53□□□□□ -2
HERC3-213ENST00000598772 HYPMO75409 117 aa2.53□□□□□ -2
HERC3-213ENST00000598772 EIF3GO75821 320 aaKnown RBP eCLIP2.53□□□□□ -2
HERC3-213ENST00000598772 CFDP00746 253 aaPredicted RBP2.53□□□□□ -2
HERC3-213ENST00000598772 UCHL1P09936 223 aa2.53□□□□□ -2
HERC3-213ENST00000598772 PGAM2P15259 253 aa2.53□□□□□ -2
HERC3-213ENST00000598772 RAB6AP20340 208 aa2.53□□□□□ -2
HERC3-213ENST00000598772 GAGE2BQ13066 116 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms