RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 BLOC1S1P78537 153 aa11.3□□□□□ -0.6
SMCO4-206ENST00000596676 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
SMCO4-206ENST00000596676 CCDC28AQ8IWP9 274 aa11.3□□□□□ -0.6
SMCO4-206ENST00000596676 C5orf17Q8NAS9 161 aa11.3□□□□□ -0.6
SMCO4-206ENST00000596676 CSNK1G2-AS1Q8NCQ2 148 aa11.3□□□□□ -0.6
SMCO4-206ENST00000596676 RXFP4Q8TDU9 374 aa11.3□□□□□ -0.6
SMCO4-206ENST00000596676 OVOL2Q9BRP0 275 aa11.3□□□□□ -0.6
SMCO4-206ENST00000596676 PPP1R14DQ9NXH3 145 aa11.3□□□□□ -0.6
SMCO4-206ENST00000596676 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
SMCO4-206ENST00000596676 Q6ZQT7 251 aa11.29□□□□□ -0.6
SMCO4-206ENST00000596676 C9orf47Q6ZRZ4 202 aa11.29□□□□□ -0.6
SMCO4-206ENST00000596676 TVP23CQ96ET8 276 aa11.29□□□□□ -0.6
SMCO4-206ENST00000596676 TGP01266 2768 aa11.29□□□□□ -0.6
SMCO4-206ENST00000596676 PEX7O00628 323 aa11.28□□□□□ -0.6
SMCO4-206ENST00000596676 UBE2CO00762 179 aa11.28□□□□□ -0.6
SMCO4-206ENST00000596676 PRM2P04554 102 aa11.28□□□□□ -0.6
SMCO4-206ENST00000596676 RBMY1A1P0DJD3 496 aaKnown RBP11.28□□□□□ -0.6
SMCO4-206ENST00000596676 RBMY1CP0DJD4 496 aa11.28□□□□□ -0.6
SMCO4-206ENST00000596676 RBMY1FQ15415 496 aaKnown RBP11.28□□□□□ -0.6
SMCO4-206ENST00000596676 PRR9Q5T870 116 aa11.28□□□□□ -0.6
SMCO4-206ENST00000596676 C1orf158Q8N1D5 194 aa11.28□□□□□ -0.6
SMCO4-206ENST00000596676 LYPD6BQ8NI32 183 aa11.28□□□□□ -0.6
SMCO4-206ENST00000596676 RNF183Q96D59 192 aa11.28□□□□□ -0.6
SMCO4-206ENST00000596676 FAM19A4Q96LR4 140 aa11.28□□□□□ -0.6
SMCO4-206ENST00000596676 LINC00477Q96M19 166 aa11.28□□□□□ -0.6
SMCO4-206ENST00000596676 RARRES2Q99969 163 aa11.28□□□□□ -0.6
SMCO4-206ENST00000596676 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.61
SMCO4-206ENST00000596676 RBAKDNA6NC62 111 aa11.27□□□□□ -0.61
SMCO4-206ENST00000596676 C11orf94C9JXX5 98 aa11.27□□□□□ -0.61
SMCO4-206ENST00000596676 SPRY2O43597 315 aa11.27□□□□□ -0.61
SMCO4-206ENST00000596676 IGLV2-11P01706 119 aa11.27□□□□□ -0.61
SMCO4-206ENST00000596676 ZNF138P52744 262 aa11.27□□□□□ -0.61
SMCO4-206ENST00000596676 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
SMCO4-206ENST00000596676 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
SMCO4-206ENST00000596676 Q6ZWC4 215 aa11.27□□□□□ -0.61
SMCO4-206ENST00000596676 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
SMCO4-206ENST00000596676 IGHV3OR16-12A0A075B7B8 117 aa11.26□□□□□ -0.61
SMCO4-206ENST00000596676 BTN1A1Q13410 526 aa11.26□□□□□ -0.61
SMCO4-206ENST00000596676 ZFAND2AQ8N6M9 145 aa11.26□□□□□ -0.61
SMCO4-206ENST00000596676 RCHY1Q96PM5 261 aa11.26□□□□□ -0.61
SMCO4-206ENST00000596676 SPATA25Q9BR10 227 aa11.26□□□□□ -0.61
SMCO4-206ENST00000596676 ATG101Q9BSB4 218 aa11.26□□□□□ -0.61
SMCO4-206ENST00000596676 LOC102723971A0A1B0GUV8 181 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 NMBP08949 121 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 LEPP41159 167 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 CDKN1BP46527 198 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 PPT1P50897 306 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 GFI1BQ5VTD9 330 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 PRNTQ86SH4 94 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 ARL6IP6Q8N6S5 226 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 CYB561D1Q8N8Q1 229 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 IGF2BP2-AS1Q96M15 143 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 MANBALQ9NQG1 85 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 PSG8Q9UQ74 426 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 ARL2-SNX15V9GYD0 113 aa11.25□□□□□ -0.61
SMCO4-206ENST00000596676 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
SMCO4-206ENST00000596676 F6UZH7 168 aa11.24□□□□□ -0.61
SMCO4-206ENST00000596676 BCL2P10415 239 aa11.24□□□□□ -0.61
SMCO4-206ENST00000596676 RNASE4P34096 147 aaKnown RBP11.24□□□□□ -0.61
SMCO4-206ENST00000596676 OR11H2Q8NH07 326 aa11.24□□□□□ -0.61
SMCO4-206ENST00000596676 C8orf49Q96NF6 230 aa11.24□□□□□ -0.61
SMCO4-206ENST00000596676 NKX6-2Q9C056 277 aaPredicted RBP11.24□□□□□ -0.61
SMCO4-206ENST00000596676 ZMAT4Q9H898 229 aa11.24□□□□□ -0.61
SMCO4-206ENST00000596676 X6R8D5 127 aa11.24□□□□□ -0.61
SMCO4-206ENST00000596676 DEFB4AO15263 64 aa11.23□□□□□ -0.61
SMCO4-206ENST00000596676 IFNA1P01562 189 aa11.23□□□□□ -0.61
SMCO4-206ENST00000596676 NHLRC4P0CG21 123 aaPredicted RBP11.23□□□□□ -0.61
SMCO4-206ENST00000596676 CRISP2P16562 243 aa11.23□□□□□ -0.61
SMCO4-206ENST00000596676 FLI1Q01543 452 aaPredicted RBP11.23□□□□□ -0.61
SMCO4-206ENST00000596676 PMS2P11Q13670 270 aa11.23□□□□□ -0.61
SMCO4-206ENST00000596676 ODF3Q96PU9 254 aa11.23□□□□□ -0.61
SMCO4-206ENST00000596676 DERL1Q9BUN8 251 aa11.23□□□□□ -0.61
SMCO4-206ENST00000596676 VAX2Q9UIW0 290 aa11.23□□□□□ -0.61
SMCO4-206ENST00000596676 RBFOX3A6NFN3 312 aa11.22□□□□□ -0.61
SMCO4-206ENST00000596676 ZNF705GA8MUZ8 300 aaPredicted RBP11.22□□□□□ -0.61
SMCO4-206ENST00000596676 KLLNB2CW77 178 aa11.22□□□□□ -0.61
SMCO4-206ENST00000596676 INSP01308 110 aa11.22□□□□□ -0.61
SMCO4-206ENST00000596676 TSPOP30536 169 aa11.22□□□□□ -0.61
SMCO4-206ENST00000596676 TOR2AQ5JU69 321 aa11.22□□□□□ -0.61
SMCO4-206ENST00000596676 ZNF705AQ6ZN79 300 aaPredicted RBP11.22□□□□□ -0.61
SMCO4-206ENST00000596676 TMEM75Q8N9X5 138 aa11.22□□□□□ -0.61
SMCO4-206ENST00000596676 C2CD4CQ8TF44 421 aa11.22□□□□□ -0.61
SMCO4-206ENST00000596676 HIST1H2BAQ96A08 127 aa11.22□□□□□ -0.61
SMCO4-206ENST00000596676 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
SMCO4-206ENST00000596676 SERTM2A0A1B0GWG4 89 aa11.21□□□□□ -0.61
SMCO4-206ENST00000596676 C7orf71A4D174 169 aa11.21□□□□□ -0.61
SMCO4-206ENST00000596676 AMBPP02760 352 aa11.21□□□□□ -0.61
SMCO4-206ENST00000596676 GPX1P07203 203 aa11.21□□□□□ -0.61
SMCO4-206ENST00000596676 AZU1P20160 251 aa11.21□□□□□ -0.61
SMCO4-206ENST00000596676 AKR1C3P42330 323 aa11.21□□□□□ -0.61
SMCO4-206ENST00000596676 ZNF80P51504 273 aaPredicted RBP11.21□□□□□ -0.61
SMCO4-206ENST00000596676 SRSF3P84103 164 aaKnown RBP11.21□□□□□ -0.61
SMCO4-206ENST00000596676 MEF2BQ02080 365 aaPredicted RBP11.21□□□□□ -0.61
SMCO4-206ENST00000596676 Q86TA4 180 aa11.21□□□□□ -0.61
SMCO4-206ENST00000596676 TREM1Q9NP99 234 aa11.21□□□□□ -0.61
SMCO4-206ENST00000596676 TP53TG1Q9Y2A0 90 aa11.21□□□□□ -0.61
SMCO4-206ENST00000596676 RAB19A4D1S5 217 aa11.2□□□□□ -0.62
SMCO4-206ENST00000596676 K7EQM0 130 aa11.2□□□□□ -0.62
SMCO4-206ENST00000596676 ZNF324O75467 553 aaPredicted RBP11.2□□□□□ -0.62
SMCO4-206ENST00000596676 HTN1P15515 57 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms