RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 TMPRSS5Q9H3S3 457 aa10.4□□□□□ -0.74
LIG1-208ENST00000595758 IGHV4-28A0A0C4DH34 117 aa10.39□□□□□ -0.75
LIG1-208ENST00000595758 DIRC3C9JPN6 131 aa10.39□□□□□ -0.75
LIG1-208ENST00000595758 DEFB4AO15263 64 aa10.39□□□□□ -0.75
LIG1-208ENST00000595758 ARL6IP6Q8N6S5 226 aa10.39□□□□□ -0.75
LIG1-208ENST00000595758 Q8NAQ8 132 aa10.39□□□□□ -0.75
LIG1-208ENST00000595758 SFT2D1Q8WV19 159 aa10.39□□□□□ -0.75
LIG1-208ENST00000595758 NEU1Q99519 415 aa10.39□□□□□ -0.75
LIG1-208ENST00000595758 C11orf68Q9H3H3 251 aaKnown RBP10.39□□□□□ -0.75
LIG1-208ENST00000595758 RBAKDNA6NC62 111 aa10.38□□□□□ -0.75
LIG1-208ENST00000595758 SMIM9A6NGZ8 99 aa10.38□□□□□ -0.75
LIG1-208ENST00000595758 SLC25A5P05141 298 aaKnown RBP10.38□□□□□ -0.75
LIG1-208ENST00000595758 ZNF138P52744 262 aa10.38□□□□□ -0.75
LIG1-208ENST00000595758 NKX2-5P52952 324 aaPredicted RBP10.38□□□□□ -0.75
LIG1-208ENST00000595758 MUC7Q8TAX7 377 aa10.38□□□□□ -0.75
LIG1-208ENST00000595758 MBD3L1Q8WWY6 194 aa10.38□□□□□ -0.75
LIG1-208ENST00000595758 RPH3ALQ9UNE2 315 aa10.38□□□□□ -0.75
LIG1-208ENST00000595758 A0A1W2PRE2 83 aa10.37□□□□□ -0.75
LIG1-208ENST00000595758 H2AFB1P0C5Y9 115 aa10.37□□□□□ -0.75
LIG1-208ENST00000595758 RBMY1A1P0DJD3 496 aaKnown RBP10.37□□□□□ -0.75
LIG1-208ENST00000595758 RBMY1CP0DJD4 496 aa10.37□□□□□ -0.75
LIG1-208ENST00000595758 RAB5CP51148 216 aa10.37□□□□□ -0.75
LIG1-208ENST00000595758 UBE2G2P60604 165 aa10.37□□□□□ -0.75
LIG1-208ENST00000595758 SUMO1P63165 101 aaKnown RBP10.37□□□□□ -0.75
LIG1-208ENST00000595758 KIR3DS1Q14943 382 aa10.37□□□□□ -0.75
LIG1-208ENST00000595758 RBMY1FQ15415 496 aaKnown RBP10.37□□□□□ -0.75
LIG1-208ENST00000595758 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
LIG1-208ENST00000595758 C5orf17Q8NAS9 161 aa10.37□□□□□ -0.75
LIG1-208ENST00000595758 IL17DQ8TAD2 202 aa10.37□□□□□ -0.75
LIG1-208ENST00000595758 FAM19A4Q96LR4 140 aa10.37□□□□□ -0.75
LIG1-208ENST00000595758 ZNF492Q9P255 531 aa10.37□□□□□ -0.75
LIG1-208ENST00000595758 GGTLC3B5MD39 225 aa10.36□□□□□ -0.75
LIG1-208ENST00000595758 J3KRW8 73 aa10.36□□□□□ -0.75
LIG1-208ENST00000595758 HBE1P02100 147 aa10.36□□□□□ -0.75
LIG1-208ENST00000595758 GNG5P63218 68 aa10.36□□□□□ -0.75
LIG1-208ENST00000595758 GFI1BQ5VTD9 330 aa10.36□□□□□ -0.75
LIG1-208ENST00000595758 TMEM256Q8N2U0 113 aa10.36□□□□□ -0.75
LIG1-208ENST00000595758 LINC01587Q99440 93 aa10.36□□□□□ -0.75
LIG1-208ENST00000595758 YTHDF2Q9Y5A9 579 aaKnown RBP10.36□□□□□ -0.75
LIG1-208ENST00000595758 A0A1B0GV50 99 aa10.35□□□□□ -0.75
LIG1-208ENST00000595758 C3orf84H3BNL1 204 aa10.35□□□□□ -0.75
LIG1-208ENST00000595758 NMBP08949 121 aa10.35□□□□□ -0.75
LIG1-208ENST00000595758 CRISP2P16562 243 aa10.35□□□□□ -0.75
LIG1-208ENST00000595758 SULT1A2P50226 295 aa10.35□□□□□ -0.75
LIG1-208ENST00000595758 RRN3P1Q2M238 152 aa10.35□□□□□ -0.75
LIG1-208ENST00000595758 Q8TAT8 98 aa10.35□□□□□ -0.75
LIG1-208ENST00000595758 C20orf144Q9BQM9 153 aa10.35□□□□□ -0.75
LIG1-208ENST00000595758 NKX6-2Q9C056 277 aaPredicted RBP10.35□□□□□ -0.75
LIG1-208ENST00000595758 EPDR1Q9UM22 224 aa10.35□□□□□ -0.75
LIG1-208ENST00000595758 DNAH7Q8WXX0 4024 aa10.35□□□□□ -0.75
LIG1-208ENST00000595758 TRAV12-3A0A0B4J271 114 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 TRBV7-9A0A0J9YWB2 115 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 SERTM2A0A1B0GWG4 89 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 FAM74A7A6NL05 159 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 ZNF705GA8MUZ8 300 aaPredicted RBP10.34□□□□□ -0.75
LIG1-208ENST00000595758 KLLNB2CW77 178 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 H7BYZ3 331 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 K7EQM0 130 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 IFNA7P01567 189 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 TCRAP04437 139 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 GPX1P07203 203 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 RNASE4P34096 147 aaKnown RBP10.34□□□□□ -0.75
LIG1-208ENST00000595758 ZFAND2AQ8N6M9 145 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 BOLA1Q9Y3E2 137 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 LENEPQ9Y5L5 61 aa10.34□□□□□ -0.75
LIG1-208ENST00000595758 LOC102723971A0A1B0GUV8 181 aa10.33□□□□□ -0.76
LIG1-208ENST00000595758 C7orf71A4D174 169 aa10.33□□□□□ -0.76
LIG1-208ENST00000595758 TMEM189A5PLL7 270 aa10.33□□□□□ -0.76
LIG1-208ENST00000595758 PRM2P04554 102 aa10.33□□□□□ -0.76
LIG1-208ENST00000595758 EMP1P54849 157 aa10.33□□□□□ -0.76
LIG1-208ENST00000595758 TAS2R60P59551 318 aa10.33□□□□□ -0.76
LIG1-208ENST00000595758 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
LIG1-208ENST00000595758 C11orf45Q8TAV5 145 aa10.33□□□□□ -0.76
LIG1-208ENST00000595758 NIPSNAP3BQ9BS92 247 aa10.33□□□□□ -0.76
LIG1-208ENST00000595758 TRAV8-1A0A0A6YYK1 113 aa10.32□□□□□ -0.76
LIG1-208ENST00000595758 TRAV1-1A0A0B4J248 108 aa10.32□□□□□ -0.76
LIG1-208ENST00000595758 HTN1P15515 57 aa10.32□□□□□ -0.76
LIG1-208ENST00000595758 BTN1A1Q13410 526 aa10.32□□□□□ -0.76
LIG1-208ENST00000595758 CST9LP1Q5W188 147 aa10.32□□□□□ -0.76
LIG1-208ENST00000595758 CYB561D1Q8N8Q1 229 aa10.32□□□□□ -0.76
LIG1-208ENST00000595758 ATG101Q9BSB4 218 aa10.32□□□□□ -0.76
LIG1-208ENST00000595758 ARL2-SNX15V9GYD0 113 aa10.32□□□□□ -0.76
LIG1-208ENST00000595758 CXorf65A6NEN9 183 aa10.31□□□□□ -0.76
LIG1-208ENST00000595758 TEX46H3BTG2 121 aa10.31□□□□□ -0.76
LIG1-208ENST00000595758 PAGE4O60829 102 aa10.31□□□□□ -0.76
LIG1-208ENST00000595758 AZU1P20160 251 aa10.31□□□□□ -0.76
LIG1-208ENST00000595758 PPT1P50897 306 aa10.31□□□□□ -0.76
LIG1-208ENST00000595758 NANOS2P60321 138 aaKnown RBP10.31□□□□□ -0.76
LIG1-208ENST00000595758 PRR9Q5T870 116 aa10.31□□□□□ -0.76
LIG1-208ENST00000595758 SGK494Q96LW2 274 aa10.31□□□□□ -0.76
LIG1-208ENST00000595758 FBLL1A6NHQ2 334 aaKnown RBP10.3□□□□□ -0.76
LIG1-208ENST00000595758 PEX7O00628 323 aa10.3□□□□□ -0.76
LIG1-208ENST00000595758 ZNF324O75467 553 aaPredicted RBP10.3□□□□□ -0.76
LIG1-208ENST00000595758 SPART-AS1P0CW21 52 aa10.3□□□□□ -0.76
LIG1-208ENST00000595758 CCL20P78556 96 aa10.3□□□□□ -0.76
LIG1-208ENST00000595758 PMS2P11Q13670 270 aa10.3□□□□□ -0.76
LIG1-208ENST00000595758 CASC10Q5T4H9 136 aa10.3□□□□□ -0.76
LIG1-208ENST00000595758 ALKAL2Q6UX46 152 aa10.3□□□□□ -0.76
LIG1-208ENST00000595758 CCDC28AQ8IWP9 274 aa10.3□□□□□ -0.76
LIG1-208ENST00000595758 HIST1H2BAQ96A08 127 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms