RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SMIM13P0DJ93 91 aa10.26□□□□□ -0.77
VRK3-209ENST00000594948 FXYD7P58549 80 aa10.26□□□□□ -0.77
VRK3-209ENST00000594948 SRSF1Q07955 248 aaKnown RBP eCLIP10.26□□□□□ -0.77
VRK3-209ENST00000594948 MRPL53Q96EL3 112 aaKnown RBP10.26□□□□□ -0.77
VRK3-209ENST00000594948 HHLA3Q9XRX5 114 aa10.26□□□□□ -0.77
VRK3-209ENST00000594948 IGLV2-18A0A075B6J9 118 aa10.26□□□□□ -0.77
VRK3-209ENST00000594948 IGKCP01834 107 aa10.26□□□□□ -0.77
VRK3-209ENST00000594948 PRB4P10163 310 aaPredicted RBP10.26□□□□□ -0.77
VRK3-209ENST00000594948 FABP2P12104 132 aa10.25□□□□□ -0.77
VRK3-209ENST00000594948 KLRD1Q13241 179 aa10.25□□□□□ -0.77
VRK3-209ENST00000594948 DYNAPQ8N1N2 210 aa10.25□□□□□ -0.77
VRK3-209ENST00000594948 FAM110DQ8TAY7 271 aaPredicted RBP10.25□□□□□ -0.77
VRK3-209ENST00000594948 HIF1ANQ9NWT6 349 aa10.25□□□□□ -0.77
VRK3-209ENST00000594948 SPCS1Q9Y6A9 102 aa10.25□□□□□ -0.77
VRK3-209ENST00000594948 DPM2O94777 84 aa10.24□□□□□ -0.77
VRK3-209ENST00000594948 HLA-DMBP28068 263 aa10.24□□□□□ -0.77
VRK3-209ENST00000594948 TAL2Q16559 108 aa10.24□□□□□ -0.77
VRK3-209ENST00000594948 IL17RELQ6ZVW7 336 aa10.24□□□□□ -0.77
VRK3-209ENST00000594948 VMO1Q7Z5L0 202 aa10.24□□□□□ -0.77
VRK3-209ENST00000594948 ZFAND3Q9H8U3 227 aa10.24□□□□□ -0.77
VRK3-209ENST00000594948 MSRB1Q9NZV6 116 aa10.24□□□□□ -0.77
VRK3-209ENST00000594948 LOC400499M0QZD8 3231 aa10.24□□□□□ -0.77
VRK3-209ENST00000594948 IGHV7-81A0A0B4J1V7 117 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 NCBP2LA6PVI3 153 aaKnown RBP10.23□□□□□ -0.77
VRK3-209ENST00000594948 SAP30O75446 220 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 ZNF502Q8TBZ5 544 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 C18orf15Q96N68 181 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 CHAC1Q9BUX1 264 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 TM2D2Q9BX73 214 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 POLEQ07864 2286 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 IGHV4-4A0A075B6R2 117 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 BUB3O43684 328 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 IGHV3-23P01764 117 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 PRSS1P07477 247 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 SAMD5Q5TGI4 173 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 DTX2Q86UW9 622 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 LINC01560Q8TB33 94 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 TMEM158Q8WZ71 300 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 ZNF318Q5VUA4 2279 aa10.23□□□□□ -0.77
VRK3-209ENST00000594948 RP1L1Q8IWN7 2480 aaPredicted RBP10.22□□□□□ -0.77
VRK3-209ENST00000594948 IGKV2D-26A0A0A0MRZ7 120 aa10.22□□□□□ -0.77
VRK3-209ENST00000594948 GOSR1O95249 250 aa10.22□□□□□ -0.77
VRK3-209ENST00000594948 TMEM11P17152 192 aa10.22□□□□□ -0.77
VRK3-209ENST00000594948 Q8N9W7 124 aa10.22□□□□□ -0.77
VRK3-209ENST00000594948 RAB37Q96AX2 223 aa10.22□□□□□ -0.77
VRK3-209ENST00000594948 FOXC2Q99958 501 aa10.22□□□□□ -0.77
VRK3-209ENST00000594948 CACNA1HO95180 2353 aa10.22□□□□□ -0.77
VRK3-209ENST00000594948 PCNX1Q96RV3 2341 aa10.22□□□□□ -0.77
VRK3-209ENST00000594948 ERCC8Q13216 396 aa10.21□□□□□ -0.77
VRK3-209ENST00000594948 PRR30Q53SZ7 412 aaPredicted RBP10.21□□□□□ -0.77
VRK3-209ENST00000594948 IGFL4Q6B9Z1 124 aa10.21□□□□□ -0.77
VRK3-209ENST00000594948 WFDC3Q8IUB2 231 aa10.21□□□□□ -0.77
VRK3-209ENST00000594948 TRBV25-1A0A075B6N4 114 aa10.21□□□□□ -0.78
VRK3-209ENST00000594948 IGKV3D-20A0A0C4DH25 116 aa10.21□□□□□ -0.78
VRK3-209ENST00000594948 PRAC2D3DTV9 90 aa10.21□□□□□ -0.78
VRK3-209ENST00000594948 LINC01619G3V211 115 aa10.21□□□□□ -0.78
VRK3-209ENST00000594948 GAS8-AS1O95177 125 aa10.21□□□□□ -0.78
VRK3-209ENST00000594948 GCSHP23434 173 aa10.21□□□□□ -0.78
VRK3-209ENST00000594948 LAGE3Q14657 143 aa10.21□□□□□ -0.78
VRK3-209ENST00000594948 CEND1Q8N111 149 aa10.21□□□□□ -0.78
VRK3-209ENST00000594948 NRACQ8N912 160 aa10.21□□□□□ -0.78
VRK3-209ENST00000594948 PHLDA1Q8WV24 401 aaPredicted RBP10.21□□□□□ -0.78
VRK3-209ENST00000594948 MUC3AQ02505 3323 aa10.2□□□□□ -0.78
VRK3-209ENST00000594948 A0A1W2PRD5 423 aa10.2□□□□□ -0.78
VRK3-209ENST00000594948 A0A1W2PRF3 423 aa10.2□□□□□ -0.78
VRK3-209ENST00000594948 A0A1W2PRM7 423 aa10.2□□□□□ -0.78
VRK3-209ENST00000594948 FXYD2P54710 66 aa10.2□□□□□ -0.78
VRK3-209ENST00000594948 TCTAP57738 103 aa10.2□□□□□ -0.78
VRK3-209ENST00000594948 C11orf71Q6IPW1 123 aa10.2□□□□□ -0.78
VRK3-209ENST00000594948 C9orf47Q6ZRZ4 202 aa10.2□□□□□ -0.78
VRK3-209ENST00000594948 MYOZ3Q8TDC0 251 aa10.2□□□□□ -0.78
VRK3-209ENST00000594948 MSRB2Q9Y3D2 182 aa10.2□□□□□ -0.78
VRK3-209ENST00000594948 ZFHX4Q86UP3 3567 aa10.2□□□□□ -0.78
VRK3-209ENST00000594948 A0A087WX48 190 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 IGHV7-4-1A0A0J9YVY3 117 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 TMEM8BA6NDV4 472 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 ZC2HC1BQ5TFG8 222 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 MRAP2Q96G30 205 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 ATP6V0BQ99437 205 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 NAA38Q9BRA0 125 aaKnown RBP10.19□□□□□ -0.78
VRK3-209ENST00000594948 AGPAT4-IT1Q9H0P7 198 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 CNOT1A5YKK6 2376 aaKnown RBP10.19□□□□□ -0.78
VRK3-209ENST00000594948 TRAV12-1A0A0B4J245 112 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 CLPSL1A2RUU4 121 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 PLNP26678 52 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 C15orf32Q32M92 178 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 TMEM78Q5T7P6 136 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 LENEPQ9Y5L5 61 aa10.19□□□□□ -0.78
VRK3-209ENST00000594948 ARHGAP32A7KAX9 2087 aa10.18□□□□□ -0.78
VRK3-209ENST00000594948 FAM90A27PA6NNH2 459 aa10.18□□□□□ -0.78
VRK3-209ENST00000594948 GATA1P15976 413 aaPredicted RBP10.18□□□□□ -0.78
VRK3-209ENST00000594948 GTSCR1Q86UQ5 136 aa10.18□□□□□ -0.78
VRK3-209ENST00000594948 SIRPDQ9H106 197 aa10.18□□□□□ -0.78
VRK3-209ENST00000594948 C11orf21Q9P2W6 132 aa10.18□□□□□ -0.78
VRK3-209ENST00000594948 U3KQE9 123 aa10.18□□□□□ -0.78
VRK3-209ENST00000594948 TRAV8-2A0A0B4J237 113 aa10.17□□□□□ -0.78
VRK3-209ENST00000594948 E9PLD3 99 aa10.17□□□□□ -0.78
VRK3-209ENST00000594948 K7EMI3 77 aa10.17□□□□□ -0.78
VRK3-209ENST00000594948 EEF1AKMT3Q96AZ1 226 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms