RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 ATP5SQ99766 215 aa16.44■□□□□ 0.22
LSM4-204ENST00000594828 GAGE12BA1L429 117 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 C7orf71A4D174 169 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 KLLNB2CW77 178 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 GAGE7O76087 117 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 GAGE12FP0CL80 117 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 GAGE12GP0CL81 117 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 GAGE12IP0CL82 117 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 PET100P0DJ07 73 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 FAM122CQ6P4D5 195 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 C9orf47Q6ZRZ4 202 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 RNF141Q8WVD5 230 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 PAXXQ9BUH6 204 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 FUT9Q9Y231 359 aa16.43■□□□□ 0.22
LSM4-204ENST00000594828 NACAE9PAV3 2078 aa16.42■□□□□ 0.22
LSM4-204ENST00000594828 OR10J4P0C629 311 aa16.42■□□□□ 0.22
LSM4-204ENST00000594828 CCL18P55774 89 aa16.42■□□□□ 0.22
LSM4-204ENST00000594828 CD300CQ08708 224 aa16.42■□□□□ 0.22
LSM4-204ENST00000594828 SOHLH1Q5JUK2 328 aa16.42■□□□□ 0.22
LSM4-204ENST00000594828 FXYD5Q96DB9 178 aa16.42■□□□□ 0.22
LSM4-204ENST00000594828 HSPB11Q9Y547 144 aa16.42■□□□□ 0.22
LSM4-204ENST00000594828 DNAH2Q9P225 4427 aa16.42■□□□□ 0.22
LSM4-204ENST00000594828 IGKV2-40A0A087WW87 121 aaPredicted RBP16.41■□□□□ 0.22
LSM4-204ENST00000594828 ZNF324O75467 553 aaPredicted RBP16.41■□□□□ 0.22
LSM4-204ENST00000594828 IGKV2D-40P01614 121 aaPredicted RBP16.41■□□□□ 0.22
LSM4-204ENST00000594828 GPX1P07203 203 aa16.41■□□□□ 0.22
LSM4-204ENST00000594828 RNASE4P34096 147 aaKnown RBP16.41■□□□□ 0.22
LSM4-204ENST00000594828 DAZ2Q13117 558 aaKnown RBP16.41■□□□□ 0.22
LSM4-204ENST00000594828 TMEM78Q5T7P6 136 aa16.41■□□□□ 0.22
LSM4-204ENST00000594828 DNAH17Q9UFH2 4485 aa16.41■□□□□ 0.22
LSM4-204ENST00000594828 CRISP2P16562 243 aa16.4■□□□□ 0.22
LSM4-204ENST00000594828 RPL12P30050 165 aaKnown RBP16.4■□□□□ 0.22
LSM4-204ENST00000594828 BTN1A1Q13410 526 aa16.4■□□□□ 0.22
LSM4-204ENST00000594828 C1orf134Q5TEV5 83 aa16.4■□□□□ 0.22
LSM4-204ENST00000594828 SCGB1C1Q8TD33 95 aa16.4■□□□□ 0.22
LSM4-204ENST00000594828 VGLL1Q99990 258 aa16.4■□□□□ 0.22
LSM4-204ENST00000594828 FAT2Q9NYQ8 4349 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 TRAV26-1A0A087WT03 109 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 OR7C2O60412 319 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 IFNA5P01569 189 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 NMBP08949 121 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 M6PRP20645 277 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 FFAR4Q5NUL3 377 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 ZNF680Q8NEM1 530 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 ZNRF2Q8NHG8 242 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 GNPNAT1Q96EK6 184 aaPredicted RBP16.39■□□□□ 0.21
LSM4-204ENST00000594828 LINC00467Q9BRT7 94 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 SMIM3Q9BZL3 60 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 GSN-AS1Q9NRJ2 163 aa16.39■□□□□ 0.21
LSM4-204ENST00000594828 HOXA5P20719 270 aa16.38■□□□□ 0.21
LSM4-204ENST00000594828 Q6ZTI0 123 aa16.38■□□□□ 0.21
LSM4-204ENST00000594828 EIF4E3Q8N5X7 224 aaKnown RBP16.38■□□□□ 0.21
LSM4-204ENST00000594828 PHYHIPLQ96FC7 376 aa16.38■□□□□ 0.21
LSM4-204ENST00000594828 BATF3Q9NR55 127 aa16.38■□□□□ 0.21
LSM4-204ENST00000594828 ZNF492Q9P255 531 aa16.38■□□□□ 0.21
LSM4-204ENST00000594828 LINC00588Q9Y4M8 146 aa16.38■□□□□ 0.21
LSM4-204ENST00000594828 RANP62826 216 aaKnown RBP16.37■□□□□ 0.21
LSM4-204ENST00000594828 ANXA2RQ3ZCQ2 193 aa16.37■□□□□ 0.21
LSM4-204ENST00000594828 ZFAND2AQ8N6M9 145 aa16.37■□□□□ 0.21
LSM4-204ENST00000594828 C11orf72Q8NBR9 251 aa16.37■□□□□ 0.21
LSM4-204ENST00000594828 RXFP4Q8TDU9 374 aa16.37■□□□□ 0.21
LSM4-204ENST00000594828 MBD2Q9UBB5 411 aa16.37■□□□□ 0.21
LSM4-204ENST00000594828 A0A0J9YY99 117 aa16.36■□□□□ 0.21
LSM4-204ENST00000594828 CSN1S1P47710 185 aa16.36■□□□□ 0.21
LSM4-204ENST00000594828 SSX7Q7RTT5 188 aa16.36■□□□□ 0.21
LSM4-204ENST00000594828 LYPD1Q8N2G4 141 aa16.36■□□□□ 0.21
LSM4-204ENST00000594828 ZNF503Q96F45 646 aa16.36■□□□□ 0.21
LSM4-204ENST00000594828 TMPRSS5Q9H3S3 457 aa16.36■□□□□ 0.21
LSM4-204ENST00000594828 NBDYA0A0U1RRE5 68 aa16.35■□□□□ 0.21
LSM4-204ENST00000594828 ZNF138P52744 262 aa16.35■□□□□ 0.21
LSM4-204ENST00000594828 TRGV2A0A075B6R0 118 aa16.34■□□□□ 0.21
LSM4-204ENST00000594828 RGS13O14921 159 aa16.34■□□□□ 0.21
LSM4-204ENST00000594828 TAS2R45P59539 299 aa16.34■□□□□ 0.21
LSM4-204ENST00000594828 UBE2L3P68036 154 aaKnown RBP16.34■□□□□ 0.21
LSM4-204ENST00000594828 KHDC3LQ587J8 217 aa16.34■□□□□ 0.21
LSM4-204ENST00000594828 PRR9Q5T870 116 aa16.34■□□□□ 0.21
LSM4-204ENST00000594828 Q9H3A6 140 aa16.34■□□□□ 0.21
LSM4-204ENST00000594828 TRGV1A0A0A0MS02 117 aa16.33■□□□□ 0.2
LSM4-204ENST00000594828 TRBV7-9A0A0J9YWB2 115 aa16.33■□□□□ 0.2
LSM4-204ENST00000594828 H3BNG1 76 aa16.33■□□□□ 0.2
LSM4-204ENST00000594828 C18orf15Q96N68 181 aa16.33■□□□□ 0.2
LSM4-204ENST00000594828 WFDC1Q9HC57 220 aa16.33■□□□□ 0.2
LSM4-204ENST00000594828 KLF12Q9Y4X4 402 aa16.33■□□□□ 0.2
LSM4-204ENST00000594828 IGHV1OR15-1A0A075B7D0 117 aa16.32■□□□□ 0.2
LSM4-204ENST00000594828 RBAKDNA6NC62 111 aa16.32■□□□□ 0.2
LSM4-204ENST00000594828 IBA57Q5T440 356 aaKnown RBP16.32■□□□□ 0.2
LSM4-204ENST00000594828 Q6ZQT7 251 aa16.32■□□□□ 0.2
LSM4-204ENST00000594828 Q8TAT8 98 aa16.32■□□□□ 0.2
LSM4-204ENST00000594828 TP53TG3Q9ULZ0 132 aa16.32■□□□□ 0.2
LSM4-204ENST00000594828 HERC2O95714 4834 aa16.31■□□□□ 0.2
LSM4-204ENST00000594828 SPINK4O60575 86 aa16.31■□□□□ 0.2
LSM4-204ENST00000594828 TCL1AP56279 114 aa16.31■□□□□ 0.2
LSM4-204ENST00000594828 ALG5Q9Y673 324 aa16.31■□□□□ 0.2
LSM4-204ENST00000594828 ACOT6Q3I5F7 207 aaPredicted RBP16.3■□□□□ 0.2
LSM4-204ENST00000594828 Q9H8V8 135 aa16.3■□□□□ 0.2
LSM4-204ENST00000594828 DIRC3C9JPN6 131 aa16.29■□□□□ 0.2
LSM4-204ENST00000594828 EIF3GO75821 320 aaKnown RBP eCLIP16.29■□□□□ 0.2
LSM4-204ENST00000594828 ESRGQ1W209 222 aa16.29■□□□□ 0.2
LSM4-204ENST00000594828 C6orf223Q8N319 242 aa16.29■□□□□ 0.2
LSM4-204ENST00000594828 ARPC5LQ9BPX5 153 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms