RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 AP5S1Q9NUS5 200 aa12.09□□□□□ -0.47
PNKP-204ENST00000594661 SIGLEC9Q9Y336 463 aa12.09□□□□□ -0.47
PNKP-204ENST00000594661 UBR5O95071 2799 aaPredicted RBP12.09□□□□□ -0.47
PNKP-204ENST00000594661 CRYBG3Q68DQ2 2970 aa12.09□□□□□ -0.47
PNKP-204ENST00000594661 MED13LQ71F56 2210 aa12.09□□□□□ -0.47
PNKP-204ENST00000594661 RPL27AP46776 148 aaKnown RBP12.08□□□□□ -0.47
PNKP-204ENST00000594661 INSL3P51460 131 aa12.08□□□□□ -0.47
PNKP-204ENST00000594661 SRSF1Q07955 248 aaKnown RBP eCLIP12.08□□□□□ -0.47
PNKP-204ENST00000594661 CFHR4Q92496 578 aa12.08□□□□□ -0.47
PNKP-204ENST00000594661 NPIPB3Q92617 1050 aa12.08□□□□□ -0.47
PNKP-204ENST00000594661 C20orf78Q9BR46 151 aa12.08□□□□□ -0.47
PNKP-204ENST00000594661 APELAP0DMC3 54 aa12.08□□□□□ -0.48
PNKP-204ENST00000594661 PRSS22Q9GZN4 317 aa12.08□□□□□ -0.48
PNKP-204ENST00000594661 GFRA4Q9GZZ7 299 aa12.08□□□□□ -0.48
PNKP-204ENST00000594661 FBXL15Q9H469 300 aa12.08□□□□□ -0.48
PNKP-204ENST00000594661 RPP21Q9H633 154 aaKnown RBP12.08□□□□□ -0.48
PNKP-204ENST00000594661 PEX7O00628 323 aa12.07□□□□□ -0.48
PNKP-204ENST00000594661 GAGE13Q4V321 117 aa12.07□□□□□ -0.48
PNKP-204ENST00000594661 BCL6BQ8N143 479 aaPredicted RBP12.07□□□□□ -0.48
PNKP-204ENST00000594661 ATP6V0E2Q8NHE4 81 aa12.07□□□□□ -0.48
PNKP-204ENST00000594661 PIFOQ8TCI5 191 aa12.07□□□□□ -0.48
PNKP-204ENST00000594661 C8orf88P0DMB2 117 aa12.07□□□□□ -0.48
PNKP-204ENST00000594661 CT45A10P0DMU9 189 aa12.07□□□□□ -0.48
PNKP-204ENST00000594661 PCP2Q8IVA1 136 aa12.07□□□□□ -0.48
PNKP-204ENST00000594661 DYNAPQ8N1N2 210 aa12.07□□□□□ -0.48
PNKP-204ENST00000594661 IGLL5B9A064 214 aa12.06□□□□□ -0.48
PNKP-204ENST00000594661 APOHP02749 345 aaPredicted RBP12.06□□□□□ -0.48
PNKP-204ENST00000594661 MT-ATP8P03928 68 aa12.06□□□□□ -0.48
PNKP-204ENST00000594661 GCSHP23434 173 aa12.06□□□□□ -0.48
PNKP-204ENST00000594661 RBPMS2Q6ZRY4 209 aaKnown RBP12.06□□□□□ -0.48
PNKP-204ENST00000594661 Q6ZUT4 128 aa12.06□□□□□ -0.48
PNKP-204ENST00000594661 PPP1R27Q86WC6 154 aa12.06□□□□□ -0.48
PNKP-204ENST00000594661 SLC25A33Q9BSK2 321 aa12.06□□□□□ -0.48
PNKP-204ENST00000594661 MRPL36Q9P0J6 103 aaKnown RBP12.06□□□□□ -0.48
PNKP-204ENST00000594661 WNK2Q9Y3S1 2297 aa12.06□□□□□ -0.48
PNKP-204ENST00000594661 TCRBV4S1A1TA0A5B7 111 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 K7ERJ3 54 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 CHEK1O14757 476 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 BRI3O95415 125 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 ZNF329Q86UD4 541 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 TM2D2Q9BX73 214 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 MRPL32Q9BYC8 188 aaKnown RBP12.05□□□□□ -0.48
PNKP-204ENST00000594661 TNFRSF18Q9Y5U5 241 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 IGKV1D-37A0A075B6S9 117 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 H3BMG7 143 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 COX7A2P2O60397 106 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 FOXI1Q12951 378 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 TM4SF20Q53R12 229 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 THAP8Q8NA92 274 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 SYT8Q8NBV8 401 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 FAM167A-AS1Q96KT0 104 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 RNF5Q99942 180 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 ANAPC13Q9BS18 74 aa12.05□□□□□ -0.48
PNKP-204ENST00000594661 TIMM8BQ9Y5J9 83 aaPredicted RBP12.05□□□□□ -0.48
PNKP-204ENST00000594661 A0A096LNJ9 63 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 HAX1O00165 279 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 PLGLAQ15195 96 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 MORN5Q5VZ52 161 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 NRGNQ92686 78 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 PGLYRP4Q96LB8 373 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 ZNF492Q9P255 531 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 CSMD1Q96PZ7 3565 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 TRAV5A0A0B4J249 113 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 PSMG4Q5JS54 123 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 C10orf113Q5VZT2 155 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 C10orf105Q8TEF2 133 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 PIMREGQ9BSJ6 248 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 SLC25A2Q9BXI2 301 aa12.04□□□□□ -0.48
PNKP-204ENST00000594661 F11RQ9Y624 299 aaKnown RBP12.04□□□□□ -0.48
PNKP-204ENST00000594661 IGHV4-61A0A0C4DH41 118 aa12.03□□□□□ -0.48
PNKP-204ENST00000594661 C19orf71A6NCJ1 209 aa12.03□□□□□ -0.48
PNKP-204ENST00000594661 TEX22C9J3V5 150 aa12.03□□□□□ -0.48
PNKP-204ENST00000594661 CSN3P07498 182 aa12.03□□□□□ -0.48
PNKP-204ENST00000594661 XGP55808 180 aa12.03□□□□□ -0.48
PNKP-204ENST00000594661 ATP5J2P56134 94 aa12.03□□□□□ -0.48
PNKP-204ENST00000594661 UBE2L3P68036 154 aaKnown RBP12.03□□□□□ -0.48
PNKP-204ENST00000594661 OR1L4Q8NGR5 311 aa12.03□□□□□ -0.48
PNKP-204ENST00000594661 MLST8Q9BVC4 326 aa12.03□□□□□ -0.48
PNKP-204ENST00000594661 C1QTNF4Q9BXJ3 329 aa12.03□□□□□ -0.48
PNKP-204ENST00000594661 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
PNKP-204ENST00000594661 IGHV3-21A0A0B4J1V1 117 aa12.02□□□□□ -0.48
PNKP-204ENST00000594661 APOMO95445 188 aa12.02□□□□□ -0.48
PNKP-204ENST00000594661 MOSP00540 346 aa12.02□□□□□ -0.48
PNKP-204ENST00000594661 NMUP48645 174 aa12.02□□□□□ -0.48
PNKP-204ENST00000594661 RPL32P62910 135 aaKnown RBP12.02□□□□□ -0.48
PNKP-204ENST00000594661 MINOS1Q5TGZ0 78 aa12.02□□□□□ -0.48
PNKP-204ENST00000594661 RUSC1-AS1Q66K80 236 aa12.02□□□□□ -0.48
PNKP-204ENST00000594661 PVRIGQ6DKI7 326 aa12.02□□□□□ -0.48
PNKP-204ENST00000594661 GATD1Q8NB37 220 aa12.02□□□□□ -0.48
PNKP-204ENST00000594661 OR8A1Q8NGG7 326 aa12.02□□□□□ -0.48
PNKP-204ENST00000594661 MINOS1-NBL1R4GNA1 71 aa12.02□□□□□ -0.48
PNKP-204ENST00000594661 CELSR2Q9HCU4 2923 aa12.02□□□□□ -0.48
PNKP-204ENST00000594661 B5MCH6 92 aa12.02□□□□□ -0.49
PNKP-204ENST00000594661 NPIPB6E9PJ23 425 aa12.02□□□□□ -0.49
PNKP-204ENST00000594661 NBR2O15453 112 aa12.02□□□□□ -0.49
PNKP-204ENST00000594661 CACNG7P62955 275 aa12.02□□□□□ -0.49
PNKP-204ENST00000594661 HES1Q14469 280 aa12.02□□□□□ -0.49
PNKP-204ENST00000594661 PATE2Q6UY27 113 aa12.02□□□□□ -0.49
PNKP-204ENST00000594661 SRSF12Q8WXF0 261 aaKnown RBP12.02□□□□□ -0.49
PNKP-204ENST00000594661 RAX2Q96IS3 184 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms