RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 CFTRP13569 1480 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 CCDC18Q5T9S5 1454 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 KIF13AQ9H1H9 1805 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 SCN9AQ15858 1988 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 LOC107986453A0A1B0GWG9 222 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 SPINK8P0C7L1 97 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 ROMO1P60602 79 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 PCBD1P61457 104 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 NNATQ16517 81 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 ASB16-AS1Q495Z4 193 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 Q56UQ5 140 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 MRPL54Q6P161 138 aaKnown RBP2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 TTC9CQ8N5M4 171 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 Q8N814 137 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 POP5Q969H6 163 aaKnown RBP2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 LSM10Q969L4 123 aaKnown RBP2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 LINC00526Q96FQ7 95 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 TAS2R4Q9NYW5 299 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 SERP1Q9Y6X1 66 aa2.84□□□□□ -1.95
SOX2-OT-219ENST00000593330 SHANK3Q9BYB0 1731 aa2.84□□□□□ -1.96
SOX2-OT-219ENST00000593330 GAPVD1Q14C86 1478 aa2.84□□□□□ -1.96
SOX2-OT-219ENST00000593330 LCTP09848 1927 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 NRKQ7Z2Y5 1582 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 IGHV1-18A0A0C4DH31 117 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 YPEL1O60688 119 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 RBP4P02753 201 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 PEBP1P30086 187 aaKnown RBP2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 ESRGQ1W209 222 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 MIC13Q5XKP0 118 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 LINC00471Q8N535 108 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 OR5AK2Q8NH90 309 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 OTOSQ8NHW6 89 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 COPS9Q8WXC6 57 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 OR8B2Q96RD0 313 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 HHLA3Q9XRX5 114 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 TPRKBQ9Y3C4 175 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 MYO5AQ9Y4I1 1855 aaKnown RBP2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 ALPK3Q96L96 1907 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 ARHGAP35Q9NRY4 1499 aa2.83□□□□□ -1.96
SOX2-OT-219ENST00000593330 SCN4AP35499 1836 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 GREB1Q4ZG55 1949 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 IGLV3-12A0A075B6K2 115 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 IGKV2D-26A0A0A0MRZ7 120 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 C7orf66A4D0T2 115 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 LYRM1O43325 122 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 TRACP01848 142 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 PMP2P02689 132 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 IFITM1P13164 125 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 MDKP21741 143 aaPredicted RBP2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 KRTAP10-10P60014 251 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 RPL26P61254 145 aaKnown RBP2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 CIRBPQ14011 172 aaKnown RBP2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 LINC00483Q53H64 154 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 Q6ZS52 159 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 Q6ZS92 163 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 PSMF1Q92530 271 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 KTN1Q86UP2 1357 aaKnown RBP2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 ABCA10Q8WWZ4 1543 aa2.82□□□□□ -1.96
SOX2-OT-219ENST00000593330 PTPRBP23467 1997 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 THADAQ6YHU6 1953 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 OR51F1A6NGY5 319 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 MCRIP1C9JLW8 97 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 APOC4-APOC2K7ER74 178 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 HYPMO75409 117 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 APOC2P02655 101 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 C9orf153Q5TBE3 101 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 Q6AWC8 147 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 ATP11AUNQ6ZP68 121 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 FP248Q71RG6 208 aaPredicted RBP2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 HYLS1Q96M11 299 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 Q9H521 79 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 V9GYS6 101 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 SCAF11Q99590 1463 aaKnown RBP2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 GLI3P10071 1580 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 KIAA1551Q9HCM1 1747 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 ANKRD26Q9UPS8 1709 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 TUBGCP6Q96RT7 1819 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 MYH13Q9UKX3 1938 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 TANC2Q9HCD6 1990 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 HEATR5AQ86XA9 2040 aa2.81□□□□□ -1.96
SOX2-OT-219ENST00000593330 MYO10Q9HD67 2058 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 MYH9P35579 1960 aaKnown RBP2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 BCORL1Q5H9F3 1711 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 SMARCA4P51532 1647 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 MAP3K1Q13233 1512 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 IGKV1D-42A0A075B6H8 117 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 TRAV3A0A0B4J244 114 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 C3orf85A0A1B0GTC6 90 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 PNMA8CA0A1B0GUJ8 204 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 hDV103S1A0JD37 113 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 OOSP1A8MZH6 123 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 E7EQL1 145 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 C17orf112F2Z3M2 114 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 RPL36A-HNRNPH2H7BZ11 118 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 TRAPPC2P0DI81 140 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 TRAPPC2BP0DI82 140 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 CKS2P33552 79 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 GNGT1P63211 74 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 C6orf52Q5T4I8 152 aa2.8□□□□□ -1.96
SOX2-OT-219ENST00000593330 C1orf134Q5TEV5 83 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms