RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 TRAV2A0A0B4J234 112 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 SMKR1H3BMG3 65 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 NDUFB8O95169 186 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 MALP21145 153 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 CNTFRP26992 372 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 IGFL4Q6B9Z1 124 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 SFTA2Q6UW10 78 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 PYGO2Q9BRQ0 406 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 FAM104BQ5XKR9 115 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 TEX43Q6ZNM6 134 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 VPREB3Q9UKI3 123 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 TSSC4Q9Y5U2 329 aaPredicted RBP10.16□□□□□ -0.78
DNMT1-228ENST00000592705 A8MWV9 139 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 COA6Q5JTJ3 125 aaKnown RBP10.16□□□□□ -0.78
DNMT1-228ENST00000592705 NAA38Q9BRA0 125 aaKnown RBP10.16□□□□□ -0.78
DNMT1-228ENST00000592705 TRAV8-2A0A0B4J237 113 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 NDUFS7O75251 213 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 ZC2HC1BQ5TFG8 222 aa10.16□□□□□ -0.78
DNMT1-228ENST00000592705 FER1L5A0AVI2 2057 aa10.15□□□□□ -0.78
DNMT1-228ENST00000592705 TNFRSF6BO95407 300 aa10.15□□□□□ -0.78
DNMT1-228ENST00000592705 LOXP28300 417 aaPredicted RBP10.15□□□□□ -0.78
DNMT1-228ENST00000592705 FAM120AOSQ5T036 256 aa10.15□□□□□ -0.78
DNMT1-228ENST00000592705 C10orf126Q8N4M7 172 aa10.15□□□□□ -0.78
DNMT1-228ENST00000592705 IGHV4-30-2A0A087WSY4 118 aa10.15□□□□□ -0.78
DNMT1-228ENST00000592705 VCYO14598 125 aa10.15□□□□□ -0.78
DNMT1-228ENST00000592705 C11orf53Q8IXP5 236 aa10.15□□□□□ -0.78
DNMT1-228ENST00000592705 DAZ1Q9NQZ3 744 aaKnown RBP10.15□□□□□ -0.78
DNMT1-228ENST00000592705 K7EN84 100 aa10.15□□□□□ -0.78
DNMT1-228ENST00000592705 NRGNQ92686 78 aa10.15□□□□□ -0.78
DNMT1-228ENST00000592705 ELANEP08246 267 aa10.15□□□□□ -0.79
DNMT1-228ENST00000592705 NDPQ00604 133 aa10.15□□□□□ -0.79
DNMT1-228ENST00000592705 FXYD5Q96DB9 178 aa10.15□□□□□ -0.79
DNMT1-228ENST00000592705 TMEM213A2RRL7 107 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 OVOL3O00110 214 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 INSP01308 110 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 CHCHD5Q9BSY4 110 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 ARFGEF3Q5TH69 2177 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 NAV2Q8IVL1 2488 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 COL4A4P53420 1690 aaPredicted RBP10.14□□□□□ -0.79
DNMT1-228ENST00000592705 SRRM4A7MD48 611 aaKnown RBP10.14□□□□□ -0.79
DNMT1-228ENST00000592705 TMEM238C9JI98 176 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 CHAC1Q9BUX1 264 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 IGHV1-24A0A0C4DH33 117 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 IGHV4-61A0A0C4DH41 118 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 H3BRN7 92 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 ERCC8Q13216 396 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 C8orf49Q96NF6 230 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 LSM4Q9Y4Z0 139 aaKnown RBP10.14□□□□□ -0.79
DNMT1-228ENST00000592705 PLCE1Q9P212 2302 aa10.14□□□□□ -0.79
DNMT1-228ENST00000592705 GAGE12BA1L429 117 aa10.13□□□□□ -0.79
DNMT1-228ENST00000592705 IGHV4-39P01824 125 aa10.13□□□□□ -0.79
DNMT1-228ENST00000592705 RNASE1P07998 156 aaKnown RBP10.13□□□□□ -0.79
DNMT1-228ENST00000592705 DEFB112Q30KQ8 113 aa10.13□□□□□ -0.79
DNMT1-228ENST00000592705 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
DNMT1-228ENST00000592705 PLEKHB2Q96CS7 222 aa10.13□□□□□ -0.79
DNMT1-228ENST00000592705 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.13□□□□□ -0.79
DNMT1-228ENST00000592705 C14orf178Q8N769 122 aaPredicted RBP10.13□□□□□ -0.79
DNMT1-228ENST00000592705 UBE2E2Q96LR5 201 aa10.13□□□□□ -0.79
DNMT1-228ENST00000592705 RHPN1-AS1Q9BWJ2 59 aa10.13□□□□□ -0.79
DNMT1-228ENST00000592705 CSTL1Q9H114 145 aa10.13□□□□□ -0.79
DNMT1-228ENST00000592705 ANKHD1Q8IWZ3 2542 aaKnown RBP10.13□□□□□ -0.79
DNMT1-228ENST00000592705 STPG4Q8N801 248 aa10.13□□□□□ -0.79
DNMT1-228ENST00000592705 WIPF2Q8TF74 440 aaPredicted RBP10.13□□□□□ -0.79
DNMT1-228ENST00000592705 NAV3Q8IVL0 2385 aa10.13□□□□□ -0.79
DNMT1-228ENST00000592705 PAX2Q02962 417 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 GAGE1Q13065 139 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 C8orf31Q8N9H6 132 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 WFDC12Q8WWY7 111 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 ESDP10768 282 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 DAD1P61803 113 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 C10orf105Q8TEF2 133 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 C9orf66Q5T8R8 295 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 TOMM7Q9P0U1 55 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 TRGV1A0A0A0MS02 117 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 IGLL1P15814 213 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 IGF2RP11717 2491 aa10.12□□□□□ -0.79
DNMT1-228ENST00000592705 TPSG1Q9NRR2 321 aa10.11□□□□□ -0.79
DNMT1-228ENST00000592705 RBMY1BA6NDE4 496 aaKnown RBP10.11□□□□□ -0.79
DNMT1-228ENST00000592705 RBMY1EA6NEQ0 496 aaKnown RBP10.11□□□□□ -0.79
DNMT1-228ENST00000592705 RBMY1DP0C7P1 496 aaKnown RBP10.11□□□□□ -0.79
DNMT1-228ENST00000592705 RBMY1A1P0DJD3 496 aaKnown RBP10.11□□□□□ -0.79
DNMT1-228ENST00000592705 RBMY1CP0DJD4 496 aa10.11□□□□□ -0.79
DNMT1-228ENST00000592705 Q8N8P6 123 aa10.11□□□□□ -0.79
DNMT1-228ENST00000592705 TRBV7-9A0A0J9YWB2 115 aa10.11□□□□□ -0.79
DNMT1-228ENST00000592705 DEFB130BP0DP73 79 aa10.11□□□□□ -0.79
DNMT1-228ENST00000592705 DEFB130AP0DP74 79 aa10.11□□□□□ -0.79
DNMT1-228ENST00000592705 SHISA9B4DS77 424 aa10.11□□□□□ -0.79
DNMT1-228ENST00000592705 LTAP01374 205 aa10.11□□□□□ -0.79
DNMT1-228ENST00000592705 LRRC75A-AS1Q8N1F1 130 aa10.11□□□□□ -0.79
DNMT1-228ENST00000592705 IGLC1P0CG04 106 aa10.1□□□□□ -0.79
DNMT1-228ENST00000592705 DEFB131AP59861 70 aa10.1□□□□□ -0.79
DNMT1-228ENST00000592705 RCHY1Q96PM5 261 aa10.1□□□□□ -0.79
DNMT1-228ENST00000592705 PRR25Q96S07 402 aa10.1□□□□□ -0.79
DNMT1-228ENST00000592705 KAAG1Q9UBP8 84 aa10.1□□□□□ -0.79
DNMT1-228ENST00000592705 SELENOKQ9Y6D0 94 aa10.1□□□□□ -0.79
DNMT1-228ENST00000592705 ZNF876PQ49A33 203 aa10.1□□□□□ -0.79
DNMT1-228ENST00000592705 MRPL51Q4U2R6 128 aaKnown RBP10.1□□□□□ -0.79
DNMT1-228ENST00000592705 CDPF1Q6NVV7 123 aa10.1□□□□□ -0.79
DNMT1-228ENST00000592705 DLX4Q92988 240 aaPredicted RBP10.1□□□□□ -0.79
DNMT1-228ENST00000592705 TRAV12-3A0A0B4J271 114 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms