RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 FOXC2Q99958 501 aa13.98□□□□□ -0.17
SPC24-206ENST00000592540 TM2D2Q9BX73 214 aa13.98□□□□□ -0.17
SPC24-206ENST00000592540 TPRP12270 2363 aaKnown RBP13.98□□□□□ -0.17
SPC24-206ENST00000592540 HLA-DMBP28068 263 aa13.98□□□□□ -0.17
SPC24-206ENST00000592540 CEND1Q8N111 149 aa13.98□□□□□ -0.17
SPC24-206ENST00000592540 NHP2Q9NX24 153 aaKnown RBP13.98□□□□□ -0.17
SPC24-206ENST00000592540 MGAQ8IWI9 3026 aa13.98□□□□□ -0.17
SPC24-206ENST00000592540 MAP1BP46821 2468 aaKnown RBP13.98□□□□□ -0.17
SPC24-206ENST00000592540 DPM2O94777 84 aa13.97□□□□□ -0.17
SPC24-206ENST00000592540 ZC2HC1BQ5TFG8 222 aa13.97□□□□□ -0.17
SPC24-206ENST00000592540 SAMD13Q5VXD3 122 aa13.97□□□□□ -0.17
SPC24-206ENST00000592540 TMEM158Q8WZ71 300 aa13.97□□□□□ -0.17
SPC24-206ENST00000592540 SMPXQ9UHP9 88 aa13.97□□□□□ -0.17
SPC24-206ENST00000592540 CHTOPQ9Y3Y2 248 aaKnown RBP13.97□□□□□ -0.17
SPC24-206ENST00000592540 SMAD5-AS1Q9Y6J3 95 aa13.97□□□□□ -0.17
SPC24-206ENST00000592540 BDP1A6H8Y1 2624 aa13.97□□□□□ -0.17
SPC24-206ENST00000592540 GATA1P15976 413 aaPredicted RBP13.97□□□□□ -0.17
SPC24-206ENST00000592540 LINC01559Q495D7 138 aa13.97□□□□□ -0.17
SPC24-206ENST00000592540 TMEM8BA6NDV4 472 aa13.96□□□□□ -0.17
SPC24-206ENST00000592540 FABP5P3A8MUU1 101 aa13.96□□□□□ -0.17
SPC24-206ENST00000592540 CIDEAO60543 219 aa13.96□□□□□ -0.17
SPC24-206ENST00000592540 ATP5LO75964 103 aa13.96□□□□□ -0.17
SPC24-206ENST00000592540 IGFBPL1Q8WX77 278 aa13.96□□□□□ -0.17
SPC24-206ENST00000592540 NDUFA3O95167 84 aa13.96□□□□□ -0.18
SPC24-206ENST00000592540 NPBQ8NG41 125 aa13.96□□□□□ -0.18
SPC24-206ENST00000592540 C21orf62Q9NYP8 219 aa13.96□□□□□ -0.18
SPC24-206ENST00000592540 ONECUT1Q9UBC0 465 aa13.96□□□□□ -0.18
SPC24-206ENST00000592540 IGHV3-23P01764 117 aa13.95□□□□□ -0.18
SPC24-206ENST00000592540 HLA-DRB4P13762 266 aa13.95□□□□□ -0.18
SPC24-206ENST00000592540 Q8N8P6 123 aa13.95□□□□□ -0.18
SPC24-206ENST00000592540 CFHR4Q92496 578 aa13.95□□□□□ -0.18
SPC24-206ENST00000592540 HLA-DRB4X5D2U9 266 aa13.95□□□□□ -0.18
SPC24-206ENST00000592540 AGRNO00468 2067 aa13.95□□□□□ -0.18
SPC24-206ENST00000592540 E9PLD3 99 aa13.95□□□□□ -0.18
SPC24-206ENST00000592540 PRRG2O14669 202 aa13.95□□□□□ -0.18
SPC24-206ENST00000592540 SRSF1Q07955 248 aaKnown RBP eCLIP13.95□□□□□ -0.181e-7■■■□□ 16.7
SPC24-206ENST00000592540 DEFB123Q8N688 67 aa13.95□□□□□ -0.18
SPC24-206ENST00000592540 POLEQ07864 2286 aa13.94□□□□□ -0.18
SPC24-206ENST00000592540 IGLV2-18A0A075B6J9 118 aa13.94□□□□□ -0.18
SPC24-206ENST00000592540 K7EMI3 77 aa13.94□□□□□ -0.18
SPC24-206ENST00000592540 PPIFP30405 207 aaKnown RBP13.94□□□□□ -0.18
SPC24-206ENST00000592540 DTX2Q86UW9 622 aa13.94□□□□□ -0.18
SPC24-206ENST00000592540 TMEM160Q9NX00 188 aa13.94□□□□□ -0.18
SPC24-206ENST00000592540 SH3BGRL2Q9UJC5 107 aa13.94□□□□□ -0.18
SPC24-206ENST00000592540 C5orf64Q2M2E5 130 aa13.93□□□□□ -0.18
SPC24-206ENST00000592540 DPM3Q9P2X0 92 aa13.93□□□□□ -0.18
SPC24-206ENST00000592540 CNOT1A5YKK6 2376 aaKnown RBP13.93□□□□□ -0.18
SPC24-206ENST00000592540 TRAV40A0A0B4J280 105 aa13.93□□□□□ -0.18
SPC24-206ENST00000592540 IGLL5B9A064 214 aa13.93□□□□□ -0.18
SPC24-206ENST00000592540 ERCC8Q13216 396 aa13.93□□□□□ -0.18
SPC24-206ENST00000592540 DYNAPQ8N1N2 210 aa13.93□□□□□ -0.18
SPC24-206ENST00000592540 ARHGAP32A7KAX9 2087 aa13.93□□□□□ -0.18
SPC24-206ENST00000592540 AZU1P20160 251 aa13.92□□□□□ -0.18
SPC24-206ENST00000592540 IGF2-ASQ6U949 168 aa13.92□□□□□ -0.18
SPC24-206ENST00000592540 FOXI2Q6ZQN5 318 aa13.92□□□□□ -0.18
SPC24-206ENST00000592540 MAPKAPK5-AS1Q8N8E1 139 aa13.92□□□□□ -0.18
SPC24-206ENST00000592540 MRPL35Q9NZE8 188 aaKnown RBP13.92□□□□□ -0.18
SPC24-206ENST00000592540 CSMD1Q96PZ7 3565 aa13.92□□□□□ -0.18
SPC24-206ENST00000592540 F8W1H4 67 aa13.92□□□□□ -0.18
SPC24-206ENST00000592540 HES1Q14469 280 aa13.92□□□□□ -0.18
SPC24-206ENST00000592540 TTC9CQ8N5M4 171 aa13.92□□□□□ -0.18
SPC24-206ENST00000592540 SIGMAR1Q99720 223 aa13.92□□□□□ -0.18
SPC24-206ENST00000592540 GTSF1LQ9H1H1 148 aa13.92□□□□□ -0.18
SPC24-206ENST00000592540 BSNQ9UPA5 3926 aa13.92□□□□□ -0.18
SPC24-206ENST00000592540 B9A039 149 aa13.91□□□□□ -0.18
SPC24-206ENST00000592540 GOSR1O95249 250 aa13.91□□□□□ -0.18
SPC24-206ENST00000592540 CTSGP08311 255 aa13.91□□□□□ -0.18
SPC24-206ENST00000592540 WFDC2Q14508 124 aa13.91□□□□□ -0.18
SPC24-206ENST00000592540 ARPC1AQ92747 370 aa13.91□□□□□ -0.18
SPC24-206ENST00000592540 SPANXB1Q9NS25 103 aaPredicted RBP13.91□□□□□ -0.18
SPC24-206ENST00000592540 PRAC2D3DTV9 90 aa13.91□□□□□ -0.18
SPC24-206ENST00000592540 NDPQ00604 133 aa13.91□□□□□ -0.18
SPC24-206ENST00000592540 DMXL1Q9Y485 3027 aa13.91□□□□□ -0.18
SPC24-206ENST00000592540 SCGB1A1P11684 91 aa13.9□□□□□ -0.18
SPC24-206ENST00000592540 TAL2Q16559 108 aa13.9□□□□□ -0.18
SPC24-206ENST00000592540 ZNF479Q96JC4 524 aa13.9□□□□□ -0.18
SPC24-206ENST00000592540 IGHV3OR16-8A0A075B7F1 116 aa13.9□□□□□ -0.18
SPC24-206ENST00000592540 TMEM11P17152 192 aa13.9□□□□□ -0.18
SPC24-206ENST00000592540 C12orf74Q32Q52 190 aa13.9□□□□□ -0.18
SPC24-206ENST00000592540 CD300EQ496F6 205 aaPredicted RBP13.9□□□□□ -0.18
SPC24-206ENST00000592540 MYOZ3Q8TDC0 251 aa13.9□□□□□ -0.18
SPC24-206ENST00000592540 TSSC4Q9Y5U2 329 aaPredicted RBP13.9□□□□□ -0.18
SPC24-206ENST00000592540 TRGV3P03979 118 aa13.89□□□□□ -0.19
SPC24-206ENST00000592540 ZNF672Q499Z4 452 aaPredicted RBP13.89□□□□□ -0.19
SPC24-206ENST00000592540 IL17RELQ6ZVW7 336 aa13.89□□□□□ -0.19
SPC24-206ENST00000592540 LY6G5BQ8NDX9 201 aa13.89□□□□□ -0.19
SPC24-206ENST00000592540 OR11H6Q8NGC7 330 aa13.89□□□□□ -0.19
SPC24-206ENST00000592540 EP300Q09472 2414 aaPredicted RBP13.89□□□□□ -0.19
SPC24-206ENST00000592540 IGKV3D-20A0A0C4DH25 116 aa13.89□□□□□ -0.19
SPC24-206ENST00000592540 LAGE3Q14657 143 aa13.89□□□□□ -0.19
SPC24-206ENST00000592540 A0A087WX48 190 aa13.88□□□□□ -0.19
SPC24-206ENST00000592540 GAGE12HA6NDE8 117 aa13.88□□□□□ -0.19
SPC24-206ENST00000592540 SMAGPQ0VAQ4 97 aa13.88□□□□□ -0.19
SPC24-206ENST00000592540 NRACQ8N912 160 aa13.88□□□□□ -0.19
SPC24-206ENST00000592540 APC2O95996 2303 aa13.88□□□□□ -0.19
SPC24-206ENST00000592540 PRSS47A8MTI9 375 aa13.87□□□□□ -0.19
SPC24-206ENST00000592540 H3BMG7 143 aa13.87□□□□□ -0.19
SPC24-206ENST00000592540 SCGB2A1O75556 95 aa13.87□□□□□ -0.19
SPC24-206ENST00000592540 KLRD1Q13241 179 aa13.87□□□□□ -0.19
SPC24-206ENST00000592540 C11orf21Q9P2W6 132 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms