RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 ZFP36P26651 326 aaKnown RBP8.98□□□□□ -0.97
ZNF540-210ENST00000592533 OR9G4Q8NGQ1 327 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 IFI27L1Q96BM0 104 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 SLC50A1Q9BRV3 221 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 LRBAP50851 2863 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 A0A1W2PRD5 423 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 A0A1W2PRF3 423 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 A0A1W2PRM7 423 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 TMEM97Q5BJF2 176 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 MRPL53Q96EL3 112 aaKnown RBP8.98□□□□□ -0.97
ZNF540-210ENST00000592533 TIMM8BQ9Y5J9 83 aaPredicted RBP8.98□□□□□ -0.97
ZNF540-210ENST00000592533 HLA-DMBP28068 263 aa8.97□□□□□ -0.97
ZNF540-210ENST00000592533 CDKN1BP46527 198 aa8.97□□□□□ -0.97
ZNF540-210ENST00000592533 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.97□□□□□ -0.97
ZNF540-210ENST00000592533 MUC6Q6W4X9 2439 aa8.97□□□□□ -0.97
ZNF540-210ENST00000592533 UBE2E1P51965 193 aa8.97□□□□□ -0.97
ZNF540-210ENST00000592533 CACNG7P62955 275 aa8.97□□□□□ -0.97
ZNF540-210ENST00000592533 FOXE3Q13461 319 aa8.97□□□□□ -0.97
ZNF540-210ENST00000592533 PEF1Q9UBV8 284 aaKnown RBP8.97□□□□□ -0.97
ZNF540-210ENST00000592533 CLPSL1A2RUU4 121 aa8.96□□□□□ -0.97
ZNF540-210ENST00000592533 SMAD7O15105 426 aaKnown RBP8.96□□□□□ -0.97
ZNF540-210ENST00000592533 NDUFS7O75251 213 aa8.96□□□□□ -0.97
ZNF540-210ENST00000592533 NHLH1Q02575 133 aa8.96□□□□□ -0.97
ZNF540-210ENST00000592533 C15orf32Q32M92 178 aa8.96□□□□□ -0.97
ZNF540-210ENST00000592533 MAP1LC3AQ9H492 121 aa8.96□□□□□ -0.97
ZNF540-210ENST00000592533 ZMAT4Q9H898 229 aa8.96□□□□□ -0.97
ZNF540-210ENST00000592533 NXT2Q9NPJ8 142 aaKnown RBP8.96□□□□□ -0.98
ZNF540-210ENST00000592533 SMKR1H3BMG3 65 aa8.96□□□□□ -0.98
ZNF540-210ENST00000592533 KLRB1Q12918 225 aa8.96□□□□□ -0.98
ZNF540-210ENST00000592533 ATP6V0BQ99437 205 aa8.96□□□□□ -0.98
ZNF540-210ENST00000592533 HIF1ANQ9NWT6 349 aa8.96□□□□□ -0.98
ZNF540-210ENST00000592533 PRSS47A8MTI9 375 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 HSD52Q0P140 79 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 ADAMTSL5Q6ZMM2 481 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 CCDC140Q96MF4 163 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 PRAC2D3DTV9 90 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 GOSR1O95249 250 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 ORM1P02763 201 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 FCER1GP30273 86 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 UCNP55089 124 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 IGFL4Q6B9Z1 124 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 PRSS57Q6UWY2 283 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 OR4X2Q8NGF9 303 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 MSRB1Q9NZV6 116 aa8.95□□□□□ -0.98
ZNF540-210ENST00000592533 C7orf71A4D174 169 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 CBY3A6NI87 242 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 AMMECR1LQ6DCA0 310 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 U3KQE9 123 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 TRAV8-6A0A0B4J262 113 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 H3BRM9 83 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 ATP6V0E1O15342 81 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 ERCC8Q13216 396 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 TRBV7-1A0A0A6YYK4 115 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 TNFRSF6BO95407 300 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 CLEC3BP05452 202 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 IL17RELQ6ZVW7 336 aa8.94□□□□□ -0.98
ZNF540-210ENST00000592533 CEP295Q9C0D2 2601 aa8.93□□□□□ -0.98
ZNF540-210ENST00000592533 IGLV2-18A0A075B6J9 118 aa8.93□□□□□ -0.98
ZNF540-210ENST00000592533 IGHV4-4A0A075B6R2 117 aa8.93□□□□□ -0.98
ZNF540-210ENST00000592533 TRAV8-2A0A0B4J237 113 aa8.93□□□□□ -0.98
ZNF540-210ENST00000592533 A1L4Q6 167 aa8.93□□□□□ -0.98
ZNF540-210ENST00000592533 A6NDN8 102 aa8.93□□□□□ -0.98
ZNF540-210ENST00000592533 COL25A1Q9BXS0 654 aaPredicted RBP8.93□□□□□ -0.98
ZNF540-210ENST00000592533 PTPRZ1P23471 2315 aaPredicted RBP8.93□□□□□ -0.98
ZNF540-210ENST00000592533 IGKV3D-20A0A0C4DH25 116 aa8.93□□□□□ -0.98
ZNF540-210ENST00000592533 C9orf47Q6ZRZ4 202 aa8.93□□□□□ -0.98
ZNF540-210ENST00000592533 ODF1Q14990 250 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 Q8N8P6 123 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 EEF1AKMT3Q96AZ1 226 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 AGPAT4-IT1Q9H0P7 198 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 C9orf118A6NHY6 69 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 SNAI2O43623 268 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 HLA-DRB4P13762 266 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 FXYD7P58549 80 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 KIR3DS1Q14943 382 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 C19orf54Q5BKX5 351 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 UFSP1Q6NVU6 142 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 ERASQ7Z444 233 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 RNF182Q8N6D2 247 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 CST9LQ9H4G1 147 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 HIGD1BQ9P298 99 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 HLA-DRB4X5D2U9 266 aa8.92□□□□□ -0.98
ZNF540-210ENST00000592533 CENPVL3A0A0U1RRI6 287 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 GAS8-AS1O95177 125 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 SAA4P35542 130 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 CRIP2P52943 208 aaPredicted RBP8.91□□□□□ -0.98
ZNF540-210ENST00000592533 ECSCRQ19T08 205 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 C11orf21Q9P2W6 132 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 DKK2Q9UBU2 259 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 SMPXQ9UHP9 88 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 HHLA3Q9XRX5 114 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 IGHV3OR16-8A0A075B7F1 116 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 IGHV7-4-1A0A0J9YVY3 117 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 A0A1W2PPR1 153 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 LEPP41159 167 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 PCP4P48539 62 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 WNK2Q9Y3S1 2297 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 EVI2AP22794 236 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 METTL26Q96S19 204 aa8.91□□□□□ -0.98
ZNF540-210ENST00000592533 IGHV3-35A0A0C4DH35 117 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms