RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 OR4S2Q8NH73 311 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 CORO2AQ92828 525 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 ADTRPQ96IZ2 230 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 SLC35E1Q96K37 410 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 UHRF2Q96PU4 802 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 CLEC7AQ9BXN2 247 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 TMEM167BQ9NRX6 74 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 SIGLEC8Q9NYZ4 499 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 PSG11Q9UQ72 335 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 ZNF257Q9Y2Q1 563 aa5.76□□□□□ -1.49
SMAD4-209ENST00000589941 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 ISLRO14498 428 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 SERF1AO75920 110 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 IGLV1-51P01701 117 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 IGLV2-8P01709 118 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 RBP4P02753 201 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 OR5G3P0C626 314 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 CRISP2P16562 243 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 NPY1RP25929 384 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 PSMB8P28062 276 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 PRDX2P32119 198 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 RAB7AP51149 207 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 ERVK-16P61578 105 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 HSPE1P61604 102 aaKnown RBP5.75□□□□□ -1.49
SMAD4-209ENST00000589941 USF2Q15853 346 aaPredicted RBP5.75□□□□□ -1.49
SMAD4-209ENST00000589941 RTL8BQ17RB0 113 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 TMEM183BQ1AE95 376 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 RPEL1Q2QD12 228 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 CST9LP1Q5W188 147 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 RASL11AQ6T310 242 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 TOMM20LQ6UXN7 152 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 TMEM136Q6ZRR5 245 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 TPRX1Q8N7U7 411 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 ZNF439Q8NDP4 499 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 OR4B1Q8NGF8 309 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 OR4A16Q8NH70 328 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 HSPB9Q9BQS6 159 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 TMEM133Q9H2Q1 129 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 RAB9BQ9NP90 201 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 ZNF580Q9UK33 172 aa5.75□□□□□ -1.49
SMAD4-209ENST00000589941 IGHV4OR15-8A0A075B7B6 117 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 A0A087WW49 117 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 A0A1W2PRE2 83 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 SMIM27A0A1W2PRY6 76 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 PGPEP1LA6NFU8 196 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 CBY3A6NI87 242 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 M0R1X1 148 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 DLEU1O43261 78 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 FCGR3BO75015 233 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 CDK2AP2O75956 126 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 SCGB1D1O95968 90 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 IGLV1-47P01700 117 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 IGHG4P01861 327 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 GPX1P07203 203 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 RBMY1A1P0DJD3 496 aaKnown RBP5.74□□□□□ -1.49
SMAD4-209ENST00000589941 CBLN1P23435 193 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 UBE2G2P60604 165 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 RPL19P84098 196 aaKnown RBP5.74□□□□□ -1.49
SMAD4-209ENST00000589941 ZNF90Q03938 601 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 RAB31Q13636 194 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 HLA-DRB5Q30154 266 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 PQLC2Q6ZP29 291 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 FAM231DQ6ZW35 169 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 MMD2Q8IY49 270 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 SLC24A4Q8NFF2 622 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 OR1L6Q8NGR2 347 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 IGF2BP2-AS1Q96M15 143 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 ZNF714Q96N38 554 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 RNF2Q99496 336 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 COMMD5Q9GZQ3 224 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 SCRT2Q9NQ03 307 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 MRPL27Q9P0M9 148 aaKnown RBP5.74□□□□□ -1.49
SMAD4-209ENST00000589941 DPM3Q9P2X0 92 aa5.74□□□□□ -1.49
SMAD4-209ENST00000589941 KLK5Q9Y337 293 aaPredicted RBP5.74□□□□□ -1.49
SMAD4-209ENST00000589941 FLG2Q5D862 2391 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-209ENST00000589941 IGHV3-43A0A0B4J1X8 118 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 TRAV3A0A0B4J244 114 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 A0A1W2PPI3 338 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 IZUMO1RA6ND01 250 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 KRTAP29-1A8MX34 341 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-209ENST00000589941 LY6LH3BQJ8 138 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 HLA-DQA1P01909 254 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 IGHV3-43DP0DP04 118 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 TMEM11P17152 192 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 PRCDQ00LT1 54 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 DIAPH2-AS1Q14236 149 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 C17orf58Q2M2W7 97 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 C2orf83Q53S99 150 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 SPINK9Q5DT21 86 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 SPATA31B1PQ5VZV4 182 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 ZNF491Q8N8L2 437 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 OR1L8Q8NGR8 309 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 RNF183Q96D59 192 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 S1PR3Q99500 378 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 OVOL2Q9BRP0 275 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 TMEM208Q9BTX3 173 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 MRPL32Q9BYC8 188 aaKnown RBP5.73□□□□□ -1.49
SMAD4-209ENST00000589941 CALYQ9NYX4 217 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 TECRQ9NZ01 308 aaKnown RBP5.73□□□□□ -1.49
SMAD4-209ENST00000589941 IDI2-AS1Q9NZ38 188 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms