RNA–Protein interactions for RNA: ENST00000589140.1

SEPT9-223, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-223	ENST00000589140	MARVELD1	Q9BSK0	173 aa		13.72	□□□□□ -0.21
SEPT9-223	ENST00000589140	WDR61	Q9GZS3	305 aa	Known RBP	13.72	□□□□□ -0.21
SEPT9-223	ENST00000589140	AGPAT4-IT1	Q9H0P7	198 aa		13.72	□□□□□ -0.21
SEPT9-223	ENST00000589140	KCNIP2	Q9NS61	270 aa		13.72	□□□□□ -0.21
SEPT9-223	ENST00000589140	GAGE12B	A1L429	117 aa		13.71	□□□□□ -0.21
SEPT9-223	ENST00000589140	C7orf71	A4D174	169 aa		13.71	□□□□□ -0.21
SEPT9-223	ENST00000589140	GAGE7	O76087	117 aa		13.71	□□□□□ -0.21
SEPT9-223	ENST00000589140	NBEAP1	P0C6P0	100 aa		13.71	□□□□□ -0.21
SEPT9-223	ENST00000589140	GAGE12F	P0CL80	117 aa		13.71	□□□□□ -0.21
SEPT9-223	ENST00000589140	GAGE12G	P0CL81	117 aa		13.71	□□□□□ -0.21
SEPT9-223	ENST00000589140	GAGE12I	P0CL82	117 aa		13.71	□□□□□ -0.21
SEPT9-223	ENST00000589140	DAZ2	Q13117	558 aa	Known RBP	13.71	□□□□□ -0.21
SEPT9-223	ENST00000589140	OR5I1	Q13606	314 aa		13.71	□□□□□ -0.21
SEPT9-223	ENST00000589140	ICAM4	Q14773	271 aa		13.71	□□□□□ -0.21
SEPT9-223	ENST00000589140	M6PR	P20645	277 aa		13.7	□□□□□ -0.22
SEPT9-223	ENST00000589140	H2BFS	P57053	126 aa		13.7	□□□□□ -0.22
SEPT9-223	ENST00000589140	C9orf47	Q6ZRZ4	202 aa		13.7	□□□□□ -0.22
SEPT9-223	ENST00000589140	PPP1R1C	Q8WVI7	109 aa		13.7	□□□□□ -0.22
SEPT9-223	ENST00000589140	MRPL32	Q9BYC8	188 aa	Known RBP	13.7	□□□□□ -0.22
SEPT9-223	ENST00000589140	OR51M1	Q9H341	326 aa		13.7	□□□□□ -0.22
SEPT9-223	ENST00000589140	LINC00588	Q9Y4M8	146 aa		13.7	□□□□□ -0.22
SEPT9-223	ENST00000589140	TRAV26-1	A0A087WT03	109 aa		13.69	□□□□□ -0.22
SEPT9-223	ENST00000589140	NBDY	A0A0U1RRE5	68 aa		13.69	□□□□□ -0.22
SEPT9-223	ENST00000589140	ZNF324	O75467	553 aa	Predicted RBP	13.69	□□□□□ -0.22
SEPT9-223	ENST00000589140	CRISP2	P16562	243 aa		13.69	□□□□□ -0.22
SEPT9-223	ENST00000589140	HOXA5	P20719	270 aa		13.69	□□□□□ -0.22
SEPT9-223	ENST00000589140	BTN1A1	Q13410	526 aa		13.69	□□□□□ -0.22
SEPT9-223	ENST00000589140	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.69	□□□□□ -0.22
SEPT9-223	ENST00000589140	ZNF503	Q96F45	646 aa		13.69	□□□□□ -0.22
SEPT9-223	ENST00000589140	LINC00467	Q9BRT7	94 aa		13.69	□□□□□ -0.22
SEPT9-223	ENST00000589140	FUT9	Q9Y231	359 aa		13.69	□□□□□ -0.22
SEPT9-223	ENST00000589140	C17orf112	F2Z3M2	114 aa		13.68	□□□□□ -0.22
SEPT9-223	ENST00000589140	NMB	P08949	121 aa		13.68	□□□□□ -0.22
SEPT9-223	ENST00000589140	CD300C	Q08708	224 aa		13.68	□□□□□ -0.22
SEPT9-223	ENST00000589140	FAM122C	Q6P4D5	195 aa		13.68	□□□□□ -0.22
SEPT9-223	ENST00000589140	ZNF680	Q8NEM1	530 aa		13.68	□□□□□ -0.22
SEPT9-223	ENST00000589140	RXFP4	Q8TDU9	374 aa		13.68	□□□□□ -0.22
SEPT9-223	ENST00000589140	FXYD5	Q96DB9	178 aa		13.68	□□□□□ -0.22
SEPT9-223	ENST00000589140	PAXX	Q9BUH6	204 aa		13.68	□□□□□ -0.22
SEPT9-223	ENST00000589140	KRTAP17-1	Q9BYP8	105 aa		13.68	□□□□□ -0.22
SEPT9-223	ENST00000589140	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	IGKV2D-40	P01614	121 aa	Predicted RBP	13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	GPX1	P07203	203 aa		13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	OR10J4	P0C629	311 aa		13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	RNASE4	P34096	147 aa	Known RBP	13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	ANXA2R	Q3ZCQ2	193 aa		13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	TMEM78	Q5T7P6	136 aa		13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140		Q6ZTI0	123 aa		13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	SSX7	Q7RTT5	188 aa		13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	EIF4E3	Q8N5X7	224 aa	Known RBP	13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	C11orf72	Q8NBR9	251 aa		13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	ATP5S	Q99766	215 aa		13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	VGLL1	Q99990	258 aa		13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140	GSN-AS1	Q9NRJ2	163 aa		13.67	□□□□□ -0.22
SEPT9-223	ENST00000589140		H3BNG1	76 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	SSNA1	O43805	119 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	MPC2	O95563	127 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	PET100	P0DJ07	73 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	MED14OS	P0DP75	135 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	DEFA1	P59665	94 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	DEFA3	P59666	94 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	ZFAND2A	Q8N6M9	145 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	PHYHIPL	Q96FC7	376 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	TMPRSS5	Q9H3S3	457 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	HSPB11	Q9Y547	144 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	MUC4	Q99102	2169 aa		13.66	□□□□□ -0.22
SEPT9-223	ENST00000589140	RYR1	P21817	5038 aa		13.65	□□□□□ -0.22
SEPT9-223	ENST00000589140		A0A0J9YY99	117 aa		13.65	□□□□□ -0.22
SEPT9-223	ENST00000589140	C18orf15	Q96N68	181 aa		13.65	□□□□□ -0.22
SEPT9-223	ENST00000589140	ZNF492	Q9P255	531 aa		13.65	□□□□□ -0.22
SEPT9-223	ENST00000589140	OR7C2	O60412	319 aa		13.64	□□□□□ -0.23
SEPT9-223	ENST00000589140	PRR9	Q5T870	116 aa		13.64	□□□□□ -0.23
SEPT9-223	ENST00000589140	C6orf223	Q8N319	242 aa		13.64	□□□□□ -0.23
SEPT9-223	ENST00000589140	TRBV7-9	A0A0J9YWB2	115 aa		13.63	□□□□□ -0.23
SEPT9-223	ENST00000589140	RPL12	P30050	165 aa	Known RBP	13.63	□□□□□ -0.23
SEPT9-223	ENST00000589140	ZNF138	P52744	262 aa		13.63	□□□□□ -0.23
SEPT9-223	ENST00000589140	FFAR4	Q5NUL3	377 aa		13.63	□□□□□ -0.23
SEPT9-223	ENST00000589140	IBA57	Q5T440	356 aa	Known RBP	13.63	□□□□□ -0.23
SEPT9-223	ENST00000589140	LYPD1	Q8N2G4	141 aa		13.63	□□□□□ -0.23
SEPT9-223	ENST00000589140	PCLO	Q9Y6V0	5065 aa		13.63	□□□□□ -0.23
SEPT9-223	ENST00000589140	LRP1B	Q9NZR2	4599 aa		13.63	□□□□□ -0.23
SEPT9-223	ENST00000589140	TRGV2	A0A075B6R0	118 aa		13.62	□□□□□ -0.23
SEPT9-223	ENST00000589140	TRGV1	A0A0A0MS02	117 aa		13.62	□□□□□ -0.23
SEPT9-223	ENST00000589140	RGS13	O14921	159 aa		13.62	□□□□□ -0.23
SEPT9-223	ENST00000589140	SPINK4	O60575	86 aa		13.62	□□□□□ -0.23
SEPT9-223	ENST00000589140	IFNA5	P01569	189 aa		13.62	□□□□□ -0.23
SEPT9-223	ENST00000589140	TCL1A	P56279	114 aa		13.62	□□□□□ -0.23
SEPT9-223	ENST00000589140	RAN	P62826	216 aa	Known RBP	13.62	□□□□□ -0.23
SEPT9-223	ENST00000589140	SCGB1C1	Q8TD33	95 aa		13.62	□□□□□ -0.23
SEPT9-223	ENST00000589140		Q9H8V8	135 aa		13.62	□□□□□ -0.23
SEPT9-223	ENST00000589140	KLF12	Q9Y4X4	402 aa		13.62	□□□□□ -0.23
SEPT9-223	ENST00000589140	IGHV1OR15-1	A0A075B7D0	117 aa		13.61	□□□□□ -0.23
SEPT9-223	ENST00000589140	CSN1S1	P47710	185 aa		13.61	□□□□□ -0.23
SEPT9-223	ENST00000589140	UBE2L3	P68036	154 aa	Known RBP	13.61	□□□□□ -0.23
SEPT9-223	ENST00000589140	TNP2	Q05952	138 aa		13.61	□□□□□ -0.23
SEPT9-223	ENST00000589140	ESRG	Q1W209	222 aa		13.61	□□□□□ -0.23
SEPT9-223	ENST00000589140		Q6ZQT7	251 aa		13.61	□□□□□ -0.23
SEPT9-223	ENST00000589140		Q8TAT8	98 aa		13.61	□□□□□ -0.23
SEPT9-223	ENST00000589140	UPK3B	Q9BT76	320 aa		13.61	□□□□□ -0.23
SEPT9-223	ENST00000589140	SMIM3	Q9BZL3	60 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms