RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ZNF705FA8MVS1 300 aaPredicted RBP9.13□□□□□ -0.95
CCBE1-203ENST00000589116 CBLN1P23435 193 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 FHL3Q13643 280 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 PRR27Q6MZM9 219 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 GBGT1Q8N5D6 347 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 FAM210BQ96KR6 192 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 NDFIP1Q9BT67 221 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 A0A1B0GUS0 222 aa9.12□□□□□ -0.95
CCBE1-203ENST00000589116 A0A1W2PPQ1 181 aa9.12□□□□□ -0.95
CCBE1-203ENST00000589116 C19orf71A6NCJ1 209 aa9.12□□□□□ -0.95
CCBE1-203ENST00000589116 ZNF705GA8MUZ8 300 aaPredicted RBP9.12□□□□□ -0.95
CCBE1-203ENST00000589116 GATCO43716 136 aaKnown RBP9.12□□□□□ -0.95
CCBE1-203ENST00000589116 EDN2P20800 178 aa9.12□□□□□ -0.95
CCBE1-203ENST00000589116 CT83Q5H943 113 aa9.12□□□□□ -0.95
CCBE1-203ENST00000589116 NUDT10Q8NFP7 164 aa9.12□□□□□ -0.95
CCBE1-203ENST00000589116 OR9G4Q8NGQ1 327 aa9.12□□□□□ -0.95
CCBE1-203ENST00000589116 NUDT11Q96G61 164 aa9.12□□□□□ -0.95
CCBE1-203ENST00000589116 CITED2Q99967 270 aaPredicted RBP9.12□□□□□ -0.95
CCBE1-203ENST00000589116 OVOL1O14753 267 aa9.11□□□□□ -0.95
CCBE1-203ENST00000589116 CT45A10P0DMU9 189 aa9.11□□□□□ -0.95
CCBE1-203ENST00000589116 ID1P41134 155 aa9.11□□□□□ -0.95
CCBE1-203ENST00000589116 ZNF738Q8NE65 137 aa9.11□□□□□ -0.95
CCBE1-203ENST00000589116 OR4B1Q8NGF8 309 aa9.11□□□□□ -0.95
CCBE1-203ENST00000589116 DCANP1Q8TF63 244 aa9.11□□□□□ -0.95
CCBE1-203ENST00000589116 DAZAP1Q96EP5 407 aaKnown RBP9.11□□□□□ -0.95
CCBE1-203ENST00000589116 RAX2Q96IS3 184 aa9.11□□□□□ -0.95
CCBE1-203ENST00000589116 PRR25Q96S07 402 aa9.11□□□□□ -0.95
CCBE1-203ENST00000589116 VGLL1Q99990 258 aa9.11□□□□□ -0.95
CCBE1-203ENST00000589116 PPP1R14DQ9NXH3 145 aa9.11□□□□□ -0.95
CCBE1-203ENST00000589116 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 NPIPB6E9PJ23 425 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 P01737 135 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 TYMSP04818 313 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 C9orf47Q6ZRZ4 202 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 DLX4Q92988 240 aaPredicted RBP9.1□□□□□ -0.95
CCBE1-203ENST00000589116 ZC2HC1AQ96GY0 325 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 RPP21Q9H633 154 aaKnown RBP9.1□□□□□ -0.95
CCBE1-203ENST00000589116 SMIM27A0A1W2PRY6 76 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 C1orf196B1AJZ1 125 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 CCL24O00175 119 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 RPS10P46783 165 aaKnown RBP9.1□□□□□ -0.95
CCBE1-203ENST00000589116 FAM3BP58499 235 aaPredicted RBP9.1□□□□□ -0.95
CCBE1-203ENST00000589116 RPL19P84098 196 aaKnown RBP9.1□□□□□ -0.95
CCBE1-203ENST00000589116 TMEM78Q5T7P6 136 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 C11orf44Q8N8P7 122 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 C20orf173Q96LM9 149 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 DUX3Q96PT4 197 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 MS4A6AQ9H2W1 248 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 SRD5A3Q9H8P0 318 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 LENEPQ9Y5L5 61 aa9.1□□□□□ -0.95
CCBE1-203ENST00000589116 ZNF138P52744 262 aa9.09□□□□□ -0.95
CCBE1-203ENST00000589116 RAB5BP61020 215 aa9.09□□□□□ -0.95
CCBE1-203ENST00000589116 LINC00322Q6ZN03 302 aaPredicted RBP9.09□□□□□ -0.95
CCBE1-203ENST00000589116 TSKUQ8WUA8 353 aa9.09□□□□□ -0.95
CCBE1-203ENST00000589116 C8orf49Q96NF6 230 aa9.09□□□□□ -0.95
CCBE1-203ENST00000589116 MEGF8Q7Z7M0 2845 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 IGKV3-7A0A075B6H7 116 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 TRAV2A0A0B4J234 112 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 A0A1W2PRX2 142 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 A8MWL6 223 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 K7EQG2 157 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 CSN3P07498 182 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 SNRPD3P62318 126 aaKnown RBP9.08□□□□□ -0.96
CCBE1-203ENST00000589116 PAFAH1B2P68402 229 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 ERCC8Q13216 396 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 SMUG1Q53HV7 270 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 ADAMTSL5Q6ZMM2 481 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 OR10J6PQ8NGY7 276 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 Q8TAT8 98 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 LINC00477Q96M19 166 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 AGPAT4-IT1Q9H0P7 198 aa9.08□□□□□ -0.96
CCBE1-203ENST00000589116 FAM231BA6NCW3 169 aa9.07□□□□□ -0.96
CCBE1-203ENST00000589116 PRB4P10163 310 aaPredicted RBP9.07□□□□□ -0.96
CCBE1-203ENST00000589116 SRSF2Q01130 221 aaKnown RBP9.07□□□□□ -0.96
CCBE1-203ENST00000589116 FAM162BQ5T6X4 162 aa9.07□□□□□ -0.96
CCBE1-203ENST00000589116 NDUFA11Q86Y39 141 aa9.07□□□□□ -0.96
CCBE1-203ENST00000589116 GPR61Q9BZJ8 451 aa9.07□□□□□ -0.96
CCBE1-203ENST00000589116 GFRA4Q9GZZ7 299 aa9.07□□□□□ -0.96
CCBE1-203ENST00000589116 SIGLEC8Q9NYZ4 499 aa9.07□□□□□ -0.96
CCBE1-203ENST00000589116 TRBV7-9A0A0J9YWB2 115 aa9.07□□□□□ -0.96
CCBE1-203ENST00000589116 OR8A1Q8NGG7 326 aa9.07□□□□□ -0.96
CCBE1-203ENST00000589116 DYNLRB2Q8TF09 96 aa9.07□□□□□ -0.96
CCBE1-203ENST00000589116 NAT8BQ9UHF3 227 aa9.07□□□□□ -0.96
CCBE1-203ENST00000589116 IZUMO1RA6ND01 250 aa9.06□□□□□ -0.96
CCBE1-203ENST00000589116 ADARB2-AS1A8MUL3 147 aa9.06□□□□□ -0.96
CCBE1-203ENST00000589116 CA1P00915 261 aaPredicted RBP9.06□□□□□ -0.96
CCBE1-203ENST00000589116 CRIP1P50238 77 aa9.06□□□□□ -0.96
CCBE1-203ENST00000589116 COX19Q49B96 90 aa9.06□□□□□ -0.96
CCBE1-203ENST00000589116 HIST2H2BDQ6DRA6 164 aa9.06□□□□□ -0.96
CCBE1-203ENST00000589116 ASCL2Q99929 193 aa9.06□□□□□ -0.96
CCBE1-203ENST00000589116 SH2D1AO60880 128 aa9.05□□□□□ -0.96
CCBE1-203ENST00000589116 TCL1AP56279 114 aa9.05□□□□□ -0.96
CCBE1-203ENST00000589116 RBPMS2Q6ZRY4 209 aaKnown RBP9.05□□□□□ -0.96
CCBE1-203ENST00000589116 WFDC3Q8IUB2 231 aa9.05□□□□□ -0.96
CCBE1-203ENST00000589116 OR2D3Q8NGH3 330 aa9.05□□□□□ -0.96
CCBE1-203ENST00000589116 NEU1Q99519 415 aa9.05□□□□□ -0.96
CCBE1-203ENST00000589116 SAV1Q9H4B6 383 aaPredicted RBP9.05□□□□□ -0.96
CCBE1-203ENST00000589116 SELENOKQ9Y6D0 94 aa9.05□□□□□ -0.96
CCBE1-203ENST00000589116 TRAV25A0A0B4J276 109 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 XKRY2A2RUG3 117 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms