RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 RBAKDNA6NC62 111 aa13.81□□□□□ -0.2
CLPTM1-209ENST00000588855 PAGE4O60829 102 aa13.81□□□□□ -0.2
CLPTM1-209ENST00000588855 HBE1P02100 147 aa13.81□□□□□ -0.2
CLPTM1-209ENST00000588855 TMEM78Q5T7P6 136 aa13.81□□□□□ -0.2
CLPTM1-209ENST00000588855 ARL6IP6Q8N6S5 226 aa13.81□□□□□ -0.2
CLPTM1-209ENST00000588855 Q8TAT8 98 aa13.81□□□□□ -0.2
CLPTM1-209ENST00000588855 TRAV12-2A0A075B6T6 113 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 CRXO43186 299 aaPredicted RBP13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 TCRAP04437 139 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 LINC00477Q96M19 166 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 ODF3Q96PU9 254 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 U3KQK5 164 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 ARL2-SNX15V9GYD0 113 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 TEX46H3BTG2 121 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 AMBPP02760 352 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 CDKN1BP46527 198 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 ATP5G3P48201 142 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 KIR3DS1Q14943 382 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 CST9LP1Q5W188 147 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 NKX6-2Q9C056 277 aaPredicted RBP13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 GNG13Q9P2W3 67 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 EPDR1Q9UM22 224 aa13.8□□□□□ -0.2
CLPTM1-209ENST00000588855 J3KRW8 73 aa13.79□□□□□ -0.2
CLPTM1-209ENST00000588855 IFNA7P01567 189 aa13.79□□□□□ -0.2
CLPTM1-209ENST00000588855 PPT1P50897 306 aa13.79□□□□□ -0.2
CLPTM1-209ENST00000588855 TEX261Q6UWH6 196 aa13.79□□□□□ -0.2
CLPTM1-209ENST00000588855 FAM19A4Q96LR4 140 aa13.79□□□□□ -0.2
CLPTM1-209ENST00000588855 IGF2BP2-AS1Q96M15 143 aa13.79□□□□□ -0.2
CLPTM1-209ENST00000588855 ZNF492Q9P255 531 aa13.79□□□□□ -0.2
CLPTM1-209ENST00000588855 TRAV8-1A0A0A6YYK1 113 aa13.78□□□□□ -0.2
CLPTM1-209ENST00000588855 INSP01308 110 aa13.78□□□□□ -0.2
CLPTM1-209ENST00000588855 LEPP41159 167 aa13.78□□□□□ -0.2
CLPTM1-209ENST00000588855 ZNF138P52744 262 aa13.78□□□□□ -0.2
CLPTM1-209ENST00000588855 BLOC1S1P78537 153 aa13.78□□□□□ -0.2
CLPTM1-209ENST00000588855 CCDC28AQ8IWP9 274 aa13.78□□□□□ -0.2
CLPTM1-209ENST00000588855 OR11H2Q8NH07 326 aa13.78□□□□□ -0.2
CLPTM1-209ENST00000588855 RBMY1A1P0DJD3 496 aaKnown RBP13.77□□□□□ -0.21
CLPTM1-209ENST00000588855 RBMY1CP0DJD4 496 aa13.77□□□□□ -0.21
CLPTM1-209ENST00000588855 TSPOP30536 169 aa13.77□□□□□ -0.21
CLPTM1-209ENST00000588855 RBMY1FQ15415 496 aaKnown RBP13.77□□□□□ -0.21
CLPTM1-209ENST00000588855 C1orf158Q8N1D5 194 aa13.77□□□□□ -0.21
CLPTM1-209ENST00000588855 CYB561D1Q8N8Q1 229 aa13.77□□□□□ -0.21
CLPTM1-209ENST00000588855 SGK494Q96LW2 274 aa13.77□□□□□ -0.21
CLPTM1-209ENST00000588855 RARRES2Q99969 163 aa13.77□□□□□ -0.21
CLPTM1-209ENST00000588855 ATG101Q9BSB4 218 aa13.77□□□□□ -0.21
CLPTM1-209ENST00000588855 MANBALQ9NQG1 85 aa13.77□□□□□ -0.21
CLPTM1-209ENST00000588855 DNAH7Q8WXX0 4024 aa13.77□□□□□ -0.21
CLPTM1-209ENST00000588855 SERTM2A0A1B0GWG4 89 aa13.76□□□□□ -0.21
CLPTM1-209ENST00000588855 PEX7O00628 323 aa13.76□□□□□ -0.21
CLPTM1-209ENST00000588855 GFI1BQ5VTD9 330 aa13.76□□□□□ -0.21
CLPTM1-209ENST00000588855 ZNF705AQ6ZN79 300 aaPredicted RBP13.76□□□□□ -0.21
CLPTM1-209ENST00000588855 ZNF680Q8NEM1 530 aa13.76□□□□□ -0.21
CLPTM1-209ENST00000588855 X6R8D5 127 aa13.76□□□□□ -0.21
CLPTM1-209ENST00000588855 IGHV3OR16-12A0A075B7B8 117 aa13.75□□□□□ -0.21
CLPTM1-209ENST00000588855 K7EQM0 130 aa13.75□□□□□ -0.21
CLPTM1-209ENST00000588855 CRISP2P16562 243 aa13.75□□□□□ -0.21
CLPTM1-209ENST00000588855 GOLT1BQ9Y3E0 138 aa13.75□□□□□ -0.21
CLPTM1-209ENST00000588855 KLLNB2CW77 178 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 C11orf94C9JXX5 98 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 PRR9Q5T870 116 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 ZFAND2AQ8N6M9 145 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 HIST1H2BAQ96A08 127 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 LINC00479Q96M42 142 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 IGLV2-11P01706 119 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 BTN1A1Q13410 526 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 TMEM75Q8N9X5 138 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 LYPD6BQ8NI32 183 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 PCNPQ8WW12 178 aaKnown RBP13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 TCEAL7Q9BRU2 100 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 TMEM208Q9BTX3 173 aa13.74□□□□□ -0.21
CLPTM1-209ENST00000588855 TRAV34A0A0B4J273 112 aa13.73□□□□□ -0.21
CLPTM1-209ENST00000588855 TRBV7-9A0A0J9YWB2 115 aa13.73□□□□□ -0.21
CLPTM1-209ENST00000588855 IFNA1P01562 189 aa13.73□□□□□ -0.21
CLPTM1-209ENST00000588855 PMS2P11Q13670 270 aa13.73□□□□□ -0.21
CLPTM1-209ENST00000588855 TVP23CQ96ET8 276 aa13.73□□□□□ -0.21
CLPTM1-209ENST00000588855 PSG8Q9UQ74 426 aa13.73□□□□□ -0.21
CLPTM1-209ENST00000588855 LENEPQ9Y5L5 61 aa13.73□□□□□ -0.21
CLPTM1-209ENST00000588855 TRAV12-3A0A0B4J271 114 aa13.72□□□□□ -0.21
CLPTM1-209ENST00000588855 SCO2A0A1W2PP80 73 aa13.72□□□□□ -0.21
CLPTM1-209ENST00000588855 C7orf71A4D174 169 aa13.72□□□□□ -0.21
CLPTM1-209ENST00000588855 GPX1P07203 203 aa13.72□□□□□ -0.21
CLPTM1-209ENST00000588855 BCL2P10415 239 aa13.72□□□□□ -0.21
CLPTM1-209ENST00000588855 FLI1Q01543 452 aaPredicted RBP13.72□□□□□ -0.21
CLPTM1-209ENST00000588855 F6UZH7 168 aa13.71□□□□□ -0.21
CLPTM1-209ENST00000588855 NMBP08949 121 aa13.71□□□□□ -0.21
CLPTM1-209ENST00000588855 RNASE4P34096 147 aaKnown RBP13.71□□□□□ -0.21
CLPTM1-209ENST00000588855 PRNTQ86SH4 94 aa13.71□□□□□ -0.21
CLPTM1-209ENST00000588855 Q8NAQ8 132 aa13.71□□□□□ -0.21
CLPTM1-209ENST00000588855 IGHV4-28A0A0C4DH34 117 aa13.7□□□□□ -0.22
CLPTM1-209ENST00000588855 DEFB4AO15263 64 aa13.7□□□□□ -0.22
CLPTM1-209ENST00000588855 MIFP14174 115 aa13.7□□□□□ -0.22
CLPTM1-209ENST00000588855 Q86TA4 180 aa13.7□□□□□ -0.22
CLPTM1-209ENST00000588855 TMEM256Q8N2U0 113 aa13.7□□□□□ -0.22
CLPTM1-209ENST00000588855 NEU1Q99519 415 aa13.7□□□□□ -0.22
CLPTM1-209ENST00000588855 C20orf144Q9BQM9 153 aa13.7□□□□□ -0.22
CLPTM1-209ENST00000588855 EDA2RQ9HAV5 297 aa13.7□□□□□ -0.22
CLPTM1-209ENST00000588855 TREM1Q9NP99 234 aa13.7□□□□□ -0.22
CLPTM1-209ENST00000588855 A0A0J9YWU9 116 aa13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 LOC102723971A0A1B0GUV8 181 aa13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 PRM2P04554 102 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms