RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 TMEM78Q5T7P6 136 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 IGFL4Q6B9Z1 124 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 FAM231DQ6ZW35 169 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 ZNF738Q8NE65 137 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 OR10J6PQ8NGY7 276 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 BTF3L4Q96K17 158 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 IMMP2LQ96T52 175 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 MS4A6AQ9H2W1 248 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 AURKAIP1Q9NWT8 199 aaPredicted RBP7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 PPP1R14DQ9NXH3 145 aa7.93□□□□□ -1.14
CHMP1B-202ENST00000588284 IGKV3-7A0A075B6H7 116 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 K7EN84 100 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 K7EQG2 157 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 CT45A10P0DMU9 189 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 CMC4P56277 68 aaPredicted RBP7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 DEFB114Q30KQ6 69 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 TMEM88Q6PEY1 159 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 KCNIP4Q6PIL6 250 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 ADAMTSL5Q6ZMM2 481 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 C9orf47Q6ZRZ4 202 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 Q86TA4 180 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 WFDC3Q8IUB2 231 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 GBGT1Q8N5D6 347 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 RNF182Q8N6D2 247 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 DCANP1Q8TF63 244 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 SGK494Q96LW2 274 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 ZNF492Q9P255 531 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 LENEPQ9Y5L5 61 aa7.92□□□□□ -1.14
CHMP1B-202ENST00000588284 IGKV2-40A0A087WW87 121 aaPredicted RBP7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 TRAV8-1A0A0A6YYK1 113 aa7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 GATCO43716 136 aaKnown RBP7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 IGKV2D-40P01614 121 aaPredicted RBP7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 EDN2P20800 178 aa7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 ZNF138P52744 262 aa7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 KRTAP10-3P60369 221 aa7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 RPL19P84098 196 aaKnown RBP7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 OR5I1Q13606 314 aa7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 IBA57Q5T440 356 aaKnown RBP7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 COX8CQ7Z4L0 72 aa7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 CBLN2Q8IUK8 224 aa7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 PRR25Q96S07 402 aa7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 AGPAT4-IT1Q9H0P7 198 aa7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 FN1P02751 2386 aaKnown RBP7.91□□□□□ -1.14
CHMP1B-202ENST00000588284 JMJD1CQ15652 2540 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 TRBV7-9A0A0J9YWB2 115 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 OR4C46A6NHA9 309 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 PRAC2D3DTV9 90 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 PF4P02776 101 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 SMUG1Q53HV7 270 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 NUDT10Q8NFP7 164 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 OR4B1Q8NGF8 309 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 OR2K2Q8NGT1 345 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 NUDT11Q96G61 164 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 C20orf173Q96LM9 149 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 SPAG8Q99932 426 aaPredicted RBP7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 VGLL1Q99990 258 aa7.9□□□□□ -1.14
CHMP1B-202ENST00000588284 TRAV9-1A0A075B6T8 112 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 COLCA2A8K830 154 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 ZNF705GA8MUZ8 300 aaPredicted RBP7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 NPIPB6E9PJ23 425 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 DUSP14O95147 198 aaKnown RBP7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 P01737 135 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 PFN1P07737 140 aaKnown RBP7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 TFPI2P48307 235 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 HIST2H2BDQ6DRA6 164 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 PRR27Q6MZM9 219 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 EBLN2Q6P2I7 272 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 FAM24BQ8N5W8 94 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 NHLRC2Q8NBF2 726 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 OR8A1Q8NGG7 326 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 ASCL2Q99929 193 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 CITED1Q99966 193 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 IL36BQ9NZH7 164 aa7.89□□□□□ -1.15
CHMP1B-202ENST00000588284 C19orf71A6NCJ1 209 aa7.88□□□□□ -1.15
CHMP1B-202ENST00000588284 FABP5P3A8MUU1 101 aa7.88□□□□□ -1.15
CHMP1B-202ENST00000588284 A8MWL6 223 aa7.88□□□□□ -1.15
CHMP1B-202ENST00000588284 ERCC8Q13216 396 aa7.88□□□□□ -1.15
CHMP1B-202ENST00000588284 ELOBQ15370 118 aa7.88□□□□□ -1.15
CHMP1B-202ENST00000588284 CT83Q5H943 113 aa7.88□□□□□ -1.15
CHMP1B-202ENST00000588284 TMEM61Q8N0U2 210 aa7.88□□□□□ -1.15
CHMP1B-202ENST00000588284 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.88□□□□□ -1.15
CHMP1B-202ENST00000588284 RNASE7Q9H1E1 156 aaKnown RBP7.88□□□□□ -1.15
CHMP1B-202ENST00000588284 V9GYV3 84 aa7.88□□□□□ -1.15
CHMP1B-202ENST00000588284 NSD1Q96L73 2696 aaPredicted RBP7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 TRBV24-1A0A075B6N3 115 aa7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 XKRY2A2RUG3 117 aa7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 SAP30O75446 220 aa7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 ZNF688P0C7X2 276 aa7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 INSL3P51460 131 aa7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 RPS20P60866 119 aaKnown RBP7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 HIST1H1AQ02539 215 aaPredicted RBP7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 CD300EQ496F6 205 aaPredicted RBP7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 PSMG4Q5JS54 123 aa7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 FAM162BQ5T6X4 162 aa7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 ZC2HC1AQ96GY0 325 aa7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 PYGO2Q9BRQ0 406 aa7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 RPP21Q9H633 154 aaKnown RBP7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 SELENOKQ9Y6D0 94 aa7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 URGCP-MRPS24S4R325 110 aa7.87□□□□□ -1.15
CHMP1B-202ENST00000588284 NBEAL1Q6ZS30 2694 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms