RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 HIST1H2BNQ99877 126 aa12.87□□□□□ -0.35
NFIX-209ENST00000587760 HIST1H2BMQ99879 126 aa12.87□□□□□ -0.35
NFIX-209ENST00000587760 VGLL1Q99990 258 aa12.87□□□□□ -0.35
NFIX-209ENST00000587760 HIGD1CA8MV81 97 aa12.86□□□□□ -0.35
NFIX-209ENST00000587760 PHOX2AO14813 284 aa12.86□□□□□ -0.35
NFIX-209ENST00000587760 HLA-DQA1P01909 254 aa12.86□□□□□ -0.35
NFIX-209ENST00000587760 TRGC1P0CF51 173 aa12.86□□□□□ -0.35
NFIX-209ENST00000587760 TCL1AP56279 114 aa12.86□□□□□ -0.35
NFIX-209ENST00000587760 SYNJ2BPP57105 145 aa12.86□□□□□ -0.35
NFIX-209ENST00000587760 SRSF2Q01130 221 aaKnown RBP12.86□□□□□ -0.35
NFIX-209ENST00000587760 LINC00322Q6ZN03 302 aaPredicted RBP12.86□□□□□ -0.35
NFIX-209ENST00000587760 RBPMS2Q6ZRY4 209 aaKnown RBP12.86□□□□□ -0.35
NFIX-209ENST00000587760 OR10J6PQ8NGY7 276 aa12.86□□□□□ -0.35
NFIX-209ENST00000587760 LINC00477Q96M19 166 aa12.86□□□□□ -0.35
NFIX-209ENST00000587760 NEU1Q99519 415 aa12.86□□□□□ -0.35
NFIX-209ENST00000587760 HECTD1Q9ULT8 2610 aa12.86□□□□□ -0.35
NFIX-209ENST00000587760 FOXA3P55318 350 aaPredicted RBP12.85□□□□□ -0.35
NFIX-209ENST00000587760 SNRPEP62304 92 aaKnown RBP12.85□□□□□ -0.35
NFIX-209ENST00000587760 KHDC1LQ5JSQ8 128 aa12.85□□□□□ -0.35
NFIX-209ENST00000587760 OR1N2Q8NGR9 330 aa12.85□□□□□ -0.35
NFIX-209ENST00000587760 ASCL2Q99929 193 aa12.85□□□□□ -0.35
NFIX-209ENST00000587760 SVEP1Q4LDE5 3571 aa12.85□□□□□ -0.35
NFIX-209ENST00000587760 UBE2CO00762 179 aa12.85□□□□□ -0.35
NFIX-209ENST00000587760 CA1P00915 261 aaPredicted RBP12.85□□□□□ -0.35
NFIX-209ENST00000587760 CBLN1P23435 193 aa12.85□□□□□ -0.35
NFIX-209ENST00000587760 FABP9Q0Z7S8 132 aa12.85□□□□□ -0.35
NFIX-209ENST00000587760 NUP35Q8NFH5 326 aa12.85□□□□□ -0.35
NFIX-209ENST00000587760 CELSR1Q9NYQ6 3014 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 TRBV7-9A0A0J9YWB2 115 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 C2orf70A6NJV1 201 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 FABP5P3A8MUU1 101 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 NDUFA6P56556 154 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 PAFAH1B2P68402 229 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 TCTEX1D4Q5JR98 221 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 KLHL30-AS1Q8NEE0 82 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 OR11H1Q8NG94 326 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 C8orf49Q96NF6 230 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 AGPAT4-IT1Q9H0P7 198 aa12.84□□□□□ -0.35
NFIX-209ENST00000587760 SONP18583 2426 aaKnown RBP12.83□□□□□ -0.36
NFIX-209ENST00000587760 A0A1B0GW15 77 aa12.83□□□□□ -0.36
NFIX-209ENST00000587760 TMEM189A5PLL7 270 aa12.83□□□□□ -0.36
NFIX-209ENST00000587760 SNURFLB1AK76 121 aa12.83□□□□□ -0.36
NFIX-209ENST00000587760 SH2D1AO60880 128 aa12.83□□□□□ -0.36
NFIX-209ENST00000587760 S100A8P05109 93 aa12.83□□□□□ -0.36
NFIX-209ENST00000587760 LINC01006Q8NI28 216 aa12.83□□□□□ -0.36
NFIX-209ENST00000587760 Q8TAT8 98 aa12.83□□□□□ -0.36
NFIX-209ENST00000587760 BORCS7Q96B45 105 aa12.83□□□□□ -0.36
NFIX-209ENST00000587760 SMR3AQ99954 134 aa12.83□□□□□ -0.36
NFIX-209ENST00000587760 TSSC4Q9Y5U2 329 aaPredicted RBP12.83□□□□□ -0.36
NFIX-209ENST00000587760 MYO9AB2RTY4 2548 aa12.82□□□□□ -0.36
NFIX-209ENST00000587760 CRIP1P50238 77 aa12.82□□□□□ -0.36
NFIX-209ENST00000587760 SNRPD3P62318 126 aaKnown RBP12.82□□□□□ -0.36
NFIX-209ENST00000587760 HIST1H1AQ02539 215 aaPredicted RBP12.82□□□□□ -0.36
NFIX-209ENST00000587760 MRPL54Q6P161 138 aaKnown RBP12.82□□□□□ -0.36
NFIX-209ENST00000587760 MRPL18Q9H0U6 180 aaKnown RBP12.82□□□□□ -0.36
NFIX-209ENST00000587760 HIVEP2P31629 2446 aa12.82□□□□□ -0.36
NFIX-209ENST00000587760 MXRA5Q9NR99 2828 aa12.81□□□□□ -0.36
NFIX-209ENST00000587760 TRAV2A0A0B4J234 112 aa12.81□□□□□ -0.36
NFIX-209ENST00000587760 HOXA5P20719 270 aa12.81□□□□□ -0.36
NFIX-209ENST00000587760 HBBP68871 147 aa12.81□□□□□ -0.36
NFIX-209ENST00000587760 ERCC8Q13216 396 aa12.81□□□□□ -0.36
NFIX-209ENST00000587760 OR9G4Q8NGQ1 327 aa12.81□□□□□ -0.36
NFIX-209ENST00000587760 DCANP1Q8TF63 244 aa12.81□□□□□ -0.36
NFIX-209ENST00000587760 NBPF19A0A087WUL8 3843 aa12.8□□□□□ -0.36
NFIX-209ENST00000587760 RAB4BP61018 213 aa12.8□□□□□ -0.36
NFIX-209ENST00000587760 COA6Q5JTJ3 125 aaKnown RBP12.8□□□□□ -0.36
NFIX-209ENST00000587760 TMEM136Q6ZRR5 245 aa12.8□□□□□ -0.36
NFIX-209ENST00000587760 C20orf173Q96LM9 149 aa12.8□□□□□ -0.36
NFIX-209ENST00000587760 MS4A6AQ9H2W1 248 aa12.8□□□□□ -0.36
NFIX-209ENST00000587760 ACANP16112 2415 aa12.8□□□□□ -0.36
NFIX-209ENST00000587760 A0A1B0GXF2 115 aa12.79□□□□□ -0.36
NFIX-209ENST00000587760 TCF21O43680 179 aa12.79□□□□□ -0.36
NFIX-209ENST00000587760 SPINK4O60575 86 aa12.79□□□□□ -0.36
NFIX-209ENST00000587760 SLURP1P55000 103 aa12.79□□□□□ -0.36
NFIX-209ENST00000587760 RIGQ13278 110 aa12.79□□□□□ -0.36
NFIX-209ENST00000587760 OR8A1Q8NGG7 326 aa12.79□□□□□ -0.36
NFIX-209ENST00000587760 GTSF1Q8WW33 167 aa12.79□□□□□ -0.36
NFIX-209ENST00000587760 GPR61Q9BZJ8 451 aa12.79□□□□□ -0.36
NFIX-209ENST00000587760 IGKV3-7A0A075B6H7 116 aa12.78□□□□□ -0.36
NFIX-209ENST00000587760 A0A1B0GUT8 65 aa12.78□□□□□ -0.36
NFIX-209ENST00000587760 K7EQG2 157 aa12.78□□□□□ -0.36
NFIX-209ENST00000587760 PGLYRP4Q96LB8 373 aa12.78□□□□□ -0.36
NFIX-209ENST00000587760 RNF114Q9Y508 228 aa12.78□□□□□ -0.36
NFIX-209ENST00000587760 HAX1O00165 279 aa12.78□□□□□ -0.36
NFIX-209ENST00000587760 APCSP02743 223 aa12.78□□□□□ -0.36
NFIX-209ENST00000587760 DEFB136Q30KP8 78 aa12.78□□□□□ -0.36
NFIX-209ENST00000587760 LINC01559Q495D7 138 aa12.78□□□□□ -0.36
NFIX-209ENST00000587760 C18orf65Q6ZTR6 163 aa12.78□□□□□ -0.36
NFIX-209ENST00000587760 A0A1B0GUS0 222 aa12.77□□□□□ -0.37
NFIX-209ENST00000587760 FHL3Q13643 280 aa12.77□□□□□ -0.37
NFIX-209ENST00000587760 DYNLRB2Q8TF09 96 aa12.77□□□□□ -0.37
NFIX-209ENST00000587760 CCL24O00175 119 aa12.76□□□□□ -0.37
NFIX-209ENST00000587760 ORM1P02763 201 aa12.76□□□□□ -0.37
NFIX-209ENST00000587760 CD28P10747 220 aa12.76□□□□□ -0.37
NFIX-209ENST00000587760 S100A2P29034 98 aa12.76□□□□□ -0.37
NFIX-209ENST00000587760 AKR1D1P51857 326 aa12.76□□□□□ -0.37
NFIX-209ENST00000587760 Q71RC1 249 aaPredicted RBP12.76□□□□□ -0.37
NFIX-209ENST00000587760 ODF3Q96PU9 254 aa12.76□□□□□ -0.37
NFIX-209ENST00000587760 CSMD1Q96PZ7 3565 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms