RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 C2orf70A6NJV1 201 aa15.02■□□□□ -0
TRIM47-204ENST00000587339 ZNF738Q8NE65 137 aa15.02■□□□□ -0
TRIM47-204ENST00000587339 DUX3Q96PT4 197 aa15.02■□□□□ -0
TRIM47-204ENST00000587339 NDFIP1Q9BT67 221 aa15.02■□□□□ -0
TRIM47-204ENST00000587339 NDUFA7O95182 113 aa15.02□□□□□ -0.01
TRIM47-204ENST00000587339 CD28P10747 220 aa15.02□□□□□ -0.01
TRIM47-204ENST00000587339 TSKUQ8WUA8 353 aa15.02□□□□□ -0.01
TRIM47-204ENST00000587339 C20orf173Q96LM9 149 aa15.02□□□□□ -0.01
TRIM47-204ENST00000587339 NPIPB6E9PJ23 425 aa15.01□□□□□ -0.01
TRIM47-204ENST00000587339 CT83Q5H943 113 aa15.01□□□□□ -0.01
TRIM47-204ENST00000587339 COX8CQ7Z4L0 72 aa15.01□□□□□ -0.01
TRIM47-204ENST00000587339 HIVEP1P15822 2718 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 A8MWL6 223 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 M0QZ24 198 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 TCF21O43680 179 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 CRIP1P50238 77 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 RPL19P84098 196 aaKnown RBP15□□□□□ -0.01
TRIM47-204ENST00000587339 TMEM78Q5T7P6 136 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 SAMD13Q5VXD3 122 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 OR4B1Q8NGF8 309 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 GPR61Q9BZJ8 451 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 AGPAT4-IT1Q9H0P7 198 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 FLNBO75369 2602 aaKnown RBP15□□□□□ -0.01
TRIM47-204ENST00000587339 DCANP1Q8TF63 244 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 NEU1Q99519 415 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 PEMTQ9UBM1 199 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 NAT8BQ9UHF3 227 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 RNF114Q9Y508 228 aa15□□□□□ -0.01
TRIM47-204ENST00000587339 A0A1W2PRX2 142 aa14.99□□□□□ -0.01
TRIM47-204ENST00000587339 SPINK4O60575 86 aa14.99□□□□□ -0.01
TRIM47-204ENST00000587339 C9orf47Q6ZRZ4 202 aa14.99□□□□□ -0.01
TRIM47-204ENST00000587339 CITED2Q99967 270 aaPredicted RBP14.99□□□□□ -0.01
TRIM47-204ENST00000587339 HIGD1CA8MV81 97 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 S100A6P06703 90 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 ID1P41134 155 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 ZNF138P52744 262 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 CTAG1AP78358 180 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 OR2D3Q8NGH3 330 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 OR9G4Q8NGQ1 327 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 MS4A6AQ9H2W1 248 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 TSSC4Q9Y5U2 329 aaPredicted RBP14.98□□□□□ -0.01
TRIM47-204ENST00000587339 IZUMO1RA6ND01 250 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 OVOL1O14753 267 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 FAM162BQ5T6X4 162 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 WFDC3Q8IUB2 231 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 NUP35Q8NFH5 326 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 FRZBQ92765 325 aa14.98□□□□□ -0.01
TRIM47-204ENST00000587339 DLX4Q92988 240 aaPredicted RBP14.98□□□□□ -0.01
TRIM47-204ENST00000587339 NSD1Q96L73 2696 aaPredicted RBP14.97□□□□□ -0.01
TRIM47-204ENST00000587339 PHOX2AO14813 284 aa14.97□□□□□ -0.01
TRIM47-204ENST00000587339 ACTL10Q5JWF8 245 aa14.97□□□□□ -0.01
TRIM47-204ENST00000587339 OR10J6PQ8NGY7 276 aa14.97□□□□□ -0.01
TRIM47-204ENST00000587339 HIST1H2BKO60814 126 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 HIST1H2BJP06899 126 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 ZNF705DP0CH99 300 aaPredicted RBP14.96□□□□□ -0.01
TRIM47-204ENST00000587339 ZNF705BP0CI00 300 aaPredicted RBP14.96□□□□□ -0.01
TRIM47-204ENST00000587339 HIST1H2BOP23527 126 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 HIST1H2BBP33778 126 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 HIST1H2BDP58876 126 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 HIST1H2BCP62807 126 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 HIST2H2BEQ16778 126 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.96□□□□□ -0.01
TRIM47-204ENST00000587339 HIST1H2BHQ93079 126 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 RAX2Q96IS3 184 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 HIST1H2BNQ99877 126 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 HIST1H2BMQ99879 126 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 GFRA4Q9GZZ7 299 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 TRAPPC1Q9Y5R8 145 aa14.96□□□□□ -0.01
TRIM47-204ENST00000587339 SH2D1AO60880 128 aa14.96□□□□□ -0.02
TRIM47-204ENST00000587339 CRLF1O75462 422 aa14.96□□□□□ -0.02
TRIM47-204ENST00000587339 TRGC1P0CF51 173 aa14.96□□□□□ -0.02
TRIM47-204ENST00000587339 TFPI2P48307 235 aa14.96□□□□□ -0.02
TRIM47-204ENST00000587339 FABP9Q0Z7S8 132 aa14.96□□□□□ -0.02
TRIM47-204ENST00000587339 ADAMTSL5Q6ZMM2 481 aa14.96□□□□□ -0.02
TRIM47-204ENST00000587339 LINC00518Q8N0U6 118 aa14.96□□□□□ -0.02
TRIM47-204ENST00000587339 PPP1R14DQ9NXH3 145 aa14.96□□□□□ -0.02
TRIM47-204ENST00000587339 FAM231BA6NCW3 169 aa14.95□□□□□ -0.02
TRIM47-204ENST00000587339 PROK1P58294 105 aa14.95□□□□□ -0.02
TRIM47-204ENST00000587339 MRPL54Q6P161 138 aaKnown RBP14.95□□□□□ -0.02
TRIM47-204ENST00000587339 GTSF1Q8WW33 167 aa14.95□□□□□ -0.02
TRIM47-204ENST00000587339 CCL24O00175 119 aa14.94□□□□□ -0.02
TRIM47-204ENST00000587339 FRMD6-AS1P0C7T7 363 aa14.94□□□□□ -0.02
TRIM47-204ENST00000587339 ZNF80P51504 273 aaPredicted RBP14.94□□□□□ -0.02
TRIM47-204ENST00000587339 FHL3Q13643 280 aa14.94□□□□□ -0.02
TRIM47-204ENST00000587339 LINC00477Q96M19 166 aa14.94□□□□□ -0.02
TRIM47-204ENST00000587339 GZMBP10144 247 aa14.93□□□□□ -0.02
TRIM47-204ENST00000587339 DEFB1P60022 68 aa14.93□□□□□ -0.02
TRIM47-204ENST00000587339 SNRPEP62304 92 aaKnown RBP14.93□□□□□ -0.02
TRIM47-204ENST00000587339 SNRPD3P62318 126 aaKnown RBP14.93□□□□□ -0.02
TRIM47-204ENST00000587339 SRSF2Q01130 221 aaKnown RBP14.93□□□□□ -0.02
TRIM47-204ENST00000587339 OR8A1Q8NGG7 326 aa14.93□□□□□ -0.02
TRIM47-204ENST00000587339 GNB1LQ9BYB4 327 aa14.93□□□□□ -0.02
TRIM47-204ENST00000587339 LENEPQ9Y5L5 61 aa14.93□□□□□ -0.02
TRIM47-204ENST00000587339 FABP5P3A8MUU1 101 aa14.92□□□□□ -0.02
TRIM47-204ENST00000587339 SNURFLB1AK76 121 aa14.92□□□□□ -0.02
TRIM47-204ENST00000587339 F6UB75 175 aa14.92□□□□□ -0.02
TRIM47-204ENST00000587339 K7EQG2 157 aa14.92□□□□□ -0.02
TRIM47-204ENST00000587339 PAFAH1B2P68402 229 aa14.92□□□□□ -0.02
TRIM47-204ENST00000587339 HIST1H1AQ02539 215 aaPredicted RBP14.92□□□□□ -0.02
TRIM47-204ENST00000587339 COX19Q49B96 90 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms