RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 TMEM136Q6ZRR5 245 aa14.15□□□□□ -0.14
RETREG3-205ENST00000586870 NUP35Q8NFH5 326 aa14.15□□□□□ -0.14
RETREG3-205ENST00000586870 WIPF2Q8TF74 440 aaPredicted RBP14.15□□□□□ -0.14
RETREG3-205ENST00000586870 SLC50A1Q9BRV3 221 aa14.15□□□□□ -0.14
RETREG3-205ENST00000586870 GFRA4Q9GZZ7 299 aa14.15□□□□□ -0.14
RETREG3-205ENST00000586870 FAM231BA6NCW3 169 aa14.15□□□□□ -0.14
RETREG3-205ENST00000586870 SPINK4O60575 86 aa14.15□□□□□ -0.14
RETREG3-205ENST00000586870 NEU1Q99519 415 aa14.15□□□□□ -0.14
RETREG3-205ENST00000586870 HLA-DQA1P01909 254 aa14.14□□□□□ -0.15
RETREG3-205ENST00000586870 FRMD6-AS1P0C7T7 363 aa14.14□□□□□ -0.15
RETREG3-205ENST00000586870 CD28P10747 220 aa14.14□□□□□ -0.15
RETREG3-205ENST00000586870 MRPL54Q6P161 138 aaKnown RBP14.14□□□□□ -0.15
RETREG3-205ENST00000586870 C16orf54Q6UWD8 224 aa14.14□□□□□ -0.15
RETREG3-205ENST00000586870 KLK15Q9H2R5 256 aa14.14□□□□□ -0.15
RETREG3-205ENST00000586870 ANK2Q01484 3957 aa14.13□□□□□ -0.15
RETREG3-205ENST00000586870 M0QZ24 198 aa14.13□□□□□ -0.15
RETREG3-205ENST00000586870 CHEK1O14757 476 aa14.13□□□□□ -0.15
RETREG3-205ENST00000586870 PDZD11Q5EBL8 140 aa14.13□□□□□ -0.15
RETREG3-205ENST00000586870 KHDC1LQ5JSQ8 128 aa14.13□□□□□ -0.15
RETREG3-205ENST00000586870 FAM209BQ5JX69 171 aa14.13□□□□□ -0.15
RETREG3-205ENST00000586870 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.13□□□□□ -0.15
RETREG3-205ENST00000586870 ATP5L2Q7Z4Y8 100 aa14.13□□□□□ -0.15
RETREG3-205ENST00000586870 ZC2HC1AQ96GY0 325 aa14.13□□□□□ -0.15
RETREG3-205ENST00000586870 HIGD1CA8MV81 97 aa14.12□□□□□ -0.15
RETREG3-205ENST00000586870 APOHP02749 345 aaPredicted RBP14.12□□□□□ -0.15
RETREG3-205ENST00000586870 SAPCD1Q5SSQ6 148 aa14.12□□□□□ -0.15
RETREG3-205ENST00000586870 COX8CQ7Z4L0 72 aa14.12□□□□□ -0.15
RETREG3-205ENST00000586870 IGHG4P01861 327 aa14.12□□□□□ -0.15
RETREG3-205ENST00000586870 LCN12Q6JVE5 192 aa14.12□□□□□ -0.15
RETREG3-205ENST00000586870 OR10D4PQ8NGN7 298 aa14.12□□□□□ -0.15
RETREG3-205ENST00000586870 HIST1H2BLQ99880 126 aa14.12□□□□□ -0.15
RETREG3-205ENST00000586870 CITED2Q99967 270 aaPredicted RBP14.12□□□□□ -0.15
RETREG3-205ENST00000586870 ZNF207O43670 478 aaKnown RBP14.11□□□□□ -0.15
RETREG3-205ENST00000586870 TRBV12-3P01733 135 aa14.11□□□□□ -0.15
RETREG3-205ENST00000586870 IGHV3-11P01762 117 aa14.11□□□□□ -0.15
RETREG3-205ENST00000586870 FABP4P15090 132 aa14.11□□□□□ -0.15
RETREG3-205ENST00000586870 RAB4BP61018 213 aa14.11□□□□□ -0.15
RETREG3-205ENST00000586870 NSUN5P1Q3KNT7 163 aa14.11□□□□□ -0.15
RETREG3-205ENST00000586870 HIST2H2BDQ6DRA6 164 aa14.11□□□□□ -0.15
RETREG3-205ENST00000586870 C10orf99Q6UWK7 81 aa14.11□□□□□ -0.15
RETREG3-205ENST00000586870 CLEC5AQ9NY25 188 aa14.11□□□□□ -0.15
RETREG3-205ENST00000586870 IGHV3-66A0A0C4DH42 116 aa14.1□□□□□ -0.15
RETREG3-205ENST00000586870 CT45A10P0DMU9 189 aa14.1□□□□□ -0.15
RETREG3-205ENST00000586870 CRISP2P16562 243 aa14.1□□□□□ -0.15
RETREG3-205ENST00000586870 OR2D3Q8NGH3 330 aa14.1□□□□□ -0.15
RETREG3-205ENST00000586870 MRPL53Q96EL3 112 aaKnown RBP14.1□□□□□ -0.15
RETREG3-205ENST00000586870 FBN3Q75N90 2809 aa14.1□□□□□ -0.15
RETREG3-205ENST00000586870 IGKV2-40A0A087WW87 121 aaPredicted RBP14.09□□□□□ -0.15
RETREG3-205ENST00000586870 A0A1W2PRX2 142 aa14.09□□□□□ -0.15
RETREG3-205ENST00000586870 RBAKDNA6NC62 111 aa14.09□□□□□ -0.15
RETREG3-205ENST00000586870 IGKV2D-40P01614 121 aaPredicted RBP14.09□□□□□ -0.15
RETREG3-205ENST00000586870 HLA-DMBP28068 263 aa14.09□□□□□ -0.15
RETREG3-205ENST00000586870 Q0VG73 95 aa14.09□□□□□ -0.15
RETREG3-205ENST00000586870 RBPMS2Q6ZRY4 209 aaKnown RBP14.09□□□□□ -0.15
RETREG3-205ENST00000586870 TCF24Q7RTU0 167 aa14.09□□□□□ -0.15
RETREG3-205ENST00000586870 GLMPQ8WWB7 406 aa14.09□□□□□ -0.15
RETREG3-205ENST00000586870 TENM1Q9UKZ4 2725 aa14.09□□□□□ -0.15
RETREG3-205ENST00000586870 IGHV3OR16-13A0A075B7E8 117 aa14.08□□□□□ -0.15
RETREG3-205ENST00000586870 IGHV3-74A0A0B4J1X5 117 aa14.08□□□□□ -0.15
RETREG3-205ENST00000586870 A0A1B0GXF2 115 aa14.08□□□□□ -0.15
RETREG3-205ENST00000586870 A0A1W2PS18 150 aa14.08□□□□□ -0.15
RETREG3-205ENST00000586870 PSMB8P28062 276 aa14.08□□□□□ -0.15
RETREG3-205ENST00000586870 FOXA3P55318 350 aaPredicted RBP14.08□□□□□ -0.15
RETREG3-205ENST00000586870 IGFL4Q6B9Z1 124 aa14.08□□□□□ -0.15
RETREG3-205ENST00000586870 NDUFA11Q86Y39 141 aa14.08□□□□□ -0.15
RETREG3-205ENST00000586870 GTSF1Q8WW33 167 aa14.08□□□□□ -0.15
RETREG3-205ENST00000586870 PACRGQ96M98 296 aaPredicted RBP14.08□□□□□ -0.15
RETREG3-205ENST00000586870 PRR25Q96S07 402 aa14.08□□□□□ -0.15
RETREG3-205ENST00000586870 TSSC4Q9Y5U2 329 aaPredicted RBP14.08□□□□□ -0.15
RETREG3-205ENST00000586870 IGHV3-49A0A0A0MS15 119 aa14.08□□□□□ -0.16
RETREG3-205ENST00000586870 APCSP02743 223 aa14.08□□□□□ -0.16
RETREG3-205ENST00000586870 AMBPP02760 352 aa14.08□□□□□ -0.16
RETREG3-205ENST00000586870 CRIP1P50238 77 aa14.08□□□□□ -0.16
RETREG3-205ENST00000586870 UNQ9165/PRO28630Q6UXU0 137 aa14.08□□□□□ -0.16
RETREG3-205ENST00000586870 TMEM18Q96B42 140 aa14.08□□□□□ -0.16
RETREG3-205ENST00000586870 C8orf49Q96NF6 230 aa14.08□□□□□ -0.16
RETREG3-205ENST00000586870 PEF1Q9UBV8 284 aaKnown RBP14.08□□□□□ -0.16
RETREG3-205ENST00000586870 ZNF705FA8MVS1 300 aaPredicted RBP14.07□□□□□ -0.16
RETREG3-205ENST00000586870 TRAV8-2A0A0B4J237 113 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 GRIFINA4D1Z8 144 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 ELANEP08246 267 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 HBBP68871 147 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 FOXE3Q13461 319 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 TCTEX1D4Q5JR98 221 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 LCNL1Q6ZST4 164 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 C8orf86Q6ZUL3 223 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 PGLYRP4Q96LB8 373 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 ASCL2Q99929 193 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 VGLL1Q99990 258 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 NDFIP1Q9BT67 221 aa14.06□□□□□ -0.16
RETREG3-205ENST00000586870 PRB4P10163 310 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-205ENST00000586870 PYY3Q5JQD4 70 aa14.05□□□□□ -0.16
RETREG3-205ENST00000586870 OR10J3Q5JRS4 329 aa14.05□□□□□ -0.16
RETREG3-205ENST00000586870 GDF5OSQ5U4N7 250 aa14.05□□□□□ -0.16
RETREG3-205ENST00000586870 K7EMT4 169 aa14.04□□□□□ -0.16
RETREG3-205ENST00000586870 ESDP10768 282 aa14.04□□□□□ -0.16
RETREG3-205ENST00000586870 BMI1P35226 326 aa14.04□□□□□ -0.16
RETREG3-205ENST00000586870 FAM162BQ5T6X4 162 aa14.04□□□□□ -0.16
RETREG3-205ENST00000586870 Q6AWC8 147 aa14.04□□□□□ -0.16
RETREG3-205ENST00000586870 TMEM256Q8N2U0 113 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms