RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PATE2Q6UY27 113 aa8.12□□□□□ -1.11
LIG3-207ENST00000586119 C6orf223Q8N319 242 aa8.12□□□□□ -1.11
LIG3-207ENST00000586119 MAPKAPK5-AS1Q8N8E1 139 aa8.12□□□□□ -1.11
LIG3-207ENST00000586119 C15orf53Q8NAA6 179 aa8.12□□□□□ -1.11
LIG3-207ENST00000586119 LYRM9A8MSI8 78 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 MBP02144 154 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 SNRPCP09234 159 aaKnown RBP8.11□□□□□ -1.11
LIG3-207ENST00000586119 HTN1P15515 57 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 RPL7P18124 248 aaKnown RBP8.11□□□□□ -1.11
LIG3-207ENST00000586119 M6PRP20645 277 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 ATP6V0CP27449 155 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 MEOX2P50222 304 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 KIR3DS1Q14943 382 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 ACOT6Q3I5F7 207 aaPredicted RBP8.11□□□□□ -1.11
LIG3-207ENST00000586119 FFAR4Q5NUL3 377 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 SAMD13Q5VXD3 122 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 LINC00305Q7Z4B0 112 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 HSD17B11Q8NBQ5 300 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 RNF141Q8WVD5 230 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 TMEM37Q8WXS4 190 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 UHRF2Q96PU4 802 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 LINC01587Q99440 93 aa8.11□□□□□ -1.11
LIG3-207ENST00000586119 MRPL32Q9BYC8 188 aaKnown RBP8.11□□□□□ -1.11
LIG3-207ENST00000586119 DUSP14O95147 198 aaKnown RBP8.1□□□□□ -1.11
LIG3-207ENST00000586119 INSP01308 110 aa8.1□□□□□ -1.11
LIG3-207ENST00000586119 C9orf62Q8N4C0 152 aa8.1□□□□□ -1.11
LIG3-207ENST00000586119 ZNF738Q8NE65 137 aa8.1□□□□□ -1.11
LIG3-207ENST00000586119 STOML3Q8TAV4 291 aa8.1□□□□□ -1.11
LIG3-207ENST00000586119 ZNF471Q9BX82 626 aaPredicted RBP8.1□□□□□ -1.11
LIG3-207ENST00000586119 KRTAP1-5Q9BYS1 174 aa8.1□□□□□ -1.11
LIG3-207ENST00000586119 LINC00862A6NCI5 91 aa8.09□□□□□ -1.11
LIG3-207ENST00000586119 CDK2AP2O75956 126 aa8.09□□□□□ -1.11
LIG3-207ENST00000586119 SEC11BP0C7V7 166 aa8.09□□□□□ -1.11
LIG3-207ENST00000586119 TPT1P13693 172 aaKnown RBP8.09□□□□□ -1.11
LIG3-207ENST00000586119 FAM3BP58499 235 aaPredicted RBP8.09□□□□□ -1.11
LIG3-207ENST00000586119 RHOBP62745 196 aa8.09□□□□□ -1.11
LIG3-207ENST00000586119 HIST1H1AQ02539 215 aaPredicted RBP8.09□□□□□ -1.11
LIG3-207ENST00000586119 EIF5AL1Q6IS14 154 aaKnown RBP8.09□□□□□ -1.11
LIG3-207ENST00000586119 SPATA12Q7Z6I5 190 aa8.09□□□□□ -1.11
LIG3-207ENST00000586119 SLC51BQ86UW2 128 aa8.09□□□□□ -1.11
LIG3-207ENST00000586119 BPIFA4PQ86YQ2 179 aa8.09□□□□□ -1.11
LIG3-207ENST00000586119 CCDC28AQ8IWP9 274 aa8.09□□□□□ -1.11
LIG3-207ENST00000586119 NOP10Q9NPE3 64 aaKnown RBP8.09□□□□□ -1.11
LIG3-207ENST00000586119 A0A1W2PPV4 95 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 CBY3A6NI87 242 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 IFNA7P01567 189 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 ATP5G1P05496 136 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 TSPOP30536 169 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 ATP5G3P48201 142 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 TAS2R45P59539 299 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 KRTAP10-2P60368 255 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 SSX7Q7RTT5 188 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 OR8A1Q8NGG7 326 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 TMEM14CQ9P0S9 112 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 FUT9Q9Y231 359 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 BOLA1Q9Y3E2 137 aa8.08□□□□□ -1.12
LIG3-207ENST00000586119 A0A087X0K7 114 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 A0A0J9YY99 117 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 UMAD1C9J7I0 102 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 PRAC2D3DTV9 90 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 FUSP35637 526 aaKnown RBP eCLIP8.07□□□□□ -1.12
LIG3-207ENST00000586119 CCL18P55774 89 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 OR5I1Q13606 314 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 PSG3Q16557 428 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 GUK1Q16774 197 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 GCSAMLQ5JQS6 135 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 AKR1C8PQ5T2L2 129 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 OR10G4Q8NGN3 311 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 OR10G9Q8NGN4 311 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 OR10G7Q8NGN6 311 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 SH3BGRL3Q9H299 93 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 Q9H8V8 135 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 SCRT2Q9NQ03 307 aa8.07□□□□□ -1.12
LIG3-207ENST00000586119 H3BTX0 84 aa8.06□□□□□ -1.12
LIG3-207ENST00000586119 MRPS12O15235 138 aaKnown RBP8.06□□□□□ -1.12
LIG3-207ENST00000586119 HOXA5P20719 270 aa8.06□□□□□ -1.12
LIG3-207ENST00000586119 TAS2R60P59551 318 aa8.06□□□□□ -1.12
LIG3-207ENST00000586119 ESRGQ1W209 222 aa8.06□□□□□ -1.12
LIG3-207ENST00000586119 CLLU1Q5K131 121 aa8.06□□□□□ -1.12
LIG3-207ENST00000586119 MORN5Q5VZ52 161 aa8.06□□□□□ -1.12
LIG3-207ENST00000586119 TEX261Q6UWH6 196 aa8.06□□□□□ -1.12
LIG3-207ENST00000586119 MIR17HGQ75NE6 70 aa8.06□□□□□ -1.12
LIG3-207ENST00000586119 Q8N1X5 172 aa8.06□□□□□ -1.12
LIG3-207ENST00000586119 ACTR3CQ9C0K3 210 aaPredicted RBP8.06□□□□□ -1.12
LIG3-207ENST00000586119 PPP1R14DQ9NXH3 145 aa8.06□□□□□ -1.12
LIG3-207ENST00000586119 TRAV26-1A0A087WT03 109 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 TRAV5A0A0B4J249 113 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 ZNF253O75346 499 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 HIST1H1EP10412 219 aaKnown RBP8.05□□□□□ -1.12
LIG3-207ENST00000586119 CDC34P49427 236 aaPredicted RBP8.05□□□□□ -1.12
LIG3-207ENST00000586119 RAB5CP51148 216 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 RAB2AP61019 212 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 KHDC3LQ587J8 217 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 DPPA3Q6W0C5 159 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 PQLC2Q6ZP29 291 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 ZNF680Q8NEM1 530 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 SUN5Q8TC36 379 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 RNASE8Q8TDE3 154 aaKnown RBP8.05□□□□□ -1.12
LIG3-207ENST00000586119 RPUSD4Q96CM3 377 aaKnown RBP8.05□□□□□ -1.12
LIG3-207ENST00000586119 FAM167A-AS1Q96KT0 104 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms