RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 ATG101Q9BSB4 218 aa10.69□□□□□ -0.7
SCAMP4-209ENST00000585335 SLC35B3Q9H1N7 401 aa10.69□□□□□ -0.7
SCAMP4-209ENST00000585335 XCL2Q9UBD3 114 aa10.69□□□□□ -0.7
SCAMP4-209ENST00000585335 EPDR1Q9UM22 224 aa10.69□□□□□ -0.7
SCAMP4-209ENST00000585335 AGRNO00468 2067 aa10.69□□□□□ -0.7
SCAMP4-209ENST00000585335 FBLL1A6NHQ2 334 aaKnown RBP10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 SPRY2O43597 315 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 INSP01308 110 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 TCRAP04437 139 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 CDKN1BP46527 198 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 ZNF138P52744 262 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 FXYD7P58549 80 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 ERCC8Q13216 396 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 SPINK13Q1W4C9 94 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 CYB561D1Q8N8Q1 229 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 ZNF680Q8NEM1 530 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 HIST1H2BAQ96A08 127 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 TXNDC17Q9BRA2 123 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 AGPAT4-IT1Q9H0P7 198 aa10.68□□□□□ -0.7
SCAMP4-209ENST00000585335 M0R2Z0 102 aa10.67□□□□□ -0.7
SCAMP4-209ENST00000585335 GNG5P63218 68 aa10.67□□□□□ -0.7
SCAMP4-209ENST00000585335 RNF183Q96D59 192 aa10.67□□□□□ -0.7
SCAMP4-209ENST00000585335 IGF2BP2-AS1Q96M15 143 aa10.67□□□□□ -0.7
SCAMP4-209ENST00000585335 VGLL1Q99990 258 aa10.67□□□□□ -0.7
SCAMP4-209ENST00000585335 NDFIP1Q9BT67 221 aa10.67□□□□□ -0.7
SCAMP4-209ENST00000585335 GOLT1BQ9Y3E0 138 aa10.67□□□□□ -0.7
SCAMP4-209ENST00000585335 LENEPQ9Y5L5 61 aa10.67□□□□□ -0.7
SCAMP4-209ENST00000585335 TRBV7-9A0A0J9YWB2 115 aa10.66□□□□□ -0.7
SCAMP4-209ENST00000585335 C11orf94C9JXX5 98 aa10.66□□□□□ -0.7
SCAMP4-209ENST00000585335 PEX7O00628 323 aa10.66□□□□□ -0.7
SCAMP4-209ENST00000585335 NMBP08949 121 aa10.66□□□□□ -0.7
SCAMP4-209ENST00000585335 CT45A10P0DMU9 189 aa10.66□□□□□ -0.7
SCAMP4-209ENST00000585335 CCL20P78556 96 aa10.66□□□□□ -0.7
SCAMP4-209ENST00000585335 PMS2P11Q13670 270 aa10.66□□□□□ -0.7
SCAMP4-209ENST00000585335 TMEM208Q9BTX3 173 aa10.66□□□□□ -0.7
SCAMP4-209ENST00000585335 ZNF492Q9P255 531 aa10.66□□□□□ -0.7
SCAMP4-209ENST00000585335 GIG44P09565 113 aaPredicted RBP10.65□□□□□ -0.7
SCAMP4-209ENST00000585335 ATP5G3P48201 142 aa10.65□□□□□ -0.7
SCAMP4-209ENST00000585335 TMEM75Q8N9X5 138 aa10.65□□□□□ -0.7
SCAMP4-209ENST00000585335 RETNQ9HD89 108 aa10.65□□□□□ -0.7
SCAMP4-209ENST00000585335 GPX1P07203 203 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 BCL2P10415 239 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 AKR1C3P42330 323 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 RAB14P61106 215 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 UBE2G1P62253 170 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 CCDC28AQ8IWP9 274 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 TMEM256Q8N2U0 113 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 OR11H2Q8NH07 326 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 Q8TAT8 98 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 RARRES2Q99969 163 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 C20orf144Q9BQM9 153 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 OVOL2Q9BRP0 275 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 VAX2Q9UIW0 290 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 U3KQK5 164 aa10.64□□□□□ -0.71
SCAMP4-209ENST00000585335 TRAV12-2A0A075B6T6 113 aa10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 IGHV3OR16-12A0A075B7B8 117 aa10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 J3KRW8 73 aa10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 PDE6DO43924 150 aa10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 S100A9P06702 114 aaKnown RBP10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 CRISP2P16562 243 aa10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 FLI1Q01543 452 aaPredicted RBP10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 MEF2BQ02080 365 aaPredicted RBP10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 CSNK1G2-AS1Q8NCQ2 148 aa10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 LYPD6BQ8NI32 183 aa10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 FMC1Q96HJ9 113 aa10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 NIPSNAP3BQ9BS92 247 aa10.63□□□□□ -0.71
SCAMP4-209ENST00000585335 TRAV8-1A0A0A6YYK1 113 aa10.62□□□□□ -0.71
SCAMP4-209ENST00000585335 C7orf71A4D174 169 aa10.62□□□□□ -0.71
SCAMP4-209ENST00000585335 SAPCD1Q5SSQ6 148 aa10.62□□□□□ -0.71
SCAMP4-209ENST00000585335 ZNF767PQ75MW2 155 aa10.62□□□□□ -0.71
SCAMP4-209ENST00000585335 PRNTQ86SH4 94 aa10.62□□□□□ -0.71
SCAMP4-209ENST00000585335 FAM19A4Q96LR4 140 aa10.62□□□□□ -0.71
SCAMP4-209ENST00000585335 TREM1Q9NP99 234 aa10.62□□□□□ -0.71
SCAMP4-209ENST00000585335 PSG8Q9UQ74 426 aa10.62□□□□□ -0.71
SCAMP4-209ENST00000585335 SCO2A0A1W2PP80 73 aa10.61□□□□□ -0.71
SCAMP4-209ENST00000585335 SMIM9A6NGZ8 99 aa10.61□□□□□ -0.71
SCAMP4-209ENST00000585335 KLLNB2CW77 178 aa10.61□□□□□ -0.71
SCAMP4-209ENST00000585335 CRXO43186 299 aaPredicted RBP10.61□□□□□ -0.71
SCAMP4-209ENST00000585335 MIFP14174 115 aa10.61□□□□□ -0.71
SCAMP4-209ENST00000585335 RNASE4P34096 147 aaKnown RBP10.61□□□□□ -0.71
SCAMP4-209ENST00000585335 GFI1BQ5VTD9 330 aa10.61□□□□□ -0.71
SCAMP4-209ENST00000585335 ZNF705AQ6ZN79 300 aaPredicted RBP10.61□□□□□ -0.71
SCAMP4-209ENST00000585335 TRAV12-3A0A0B4J271 114 aa10.6□□□□□ -0.71
SCAMP4-209ENST00000585335 TRAV34A0A0B4J273 112 aa10.6□□□□□ -0.71
SCAMP4-209ENST00000585335 LOC102723971A0A1B0GUV8 181 aa10.6□□□□□ -0.71
SCAMP4-209ENST00000585335 RBFOX3A6NFN3 312 aa10.6□□□□□ -0.71
SCAMP4-209ENST00000585335 H7BYZ3 331 aa10.6□□□□□ -0.71
SCAMP4-209ENST00000585335 Q86TA4 180 aa10.6□□□□□ -0.71
SCAMP4-209ENST00000585335 ZFAND2AQ8N6M9 145 aa10.6□□□□□ -0.71
SCAMP4-209ENST00000585335 SGK494Q96LW2 274 aa10.6□□□□□ -0.71
SCAMP4-209ENST00000585335 LINC01587Q99440 93 aa10.6□□□□□ -0.71
SCAMP4-209ENST00000585335 NEU1Q99519 415 aa10.6□□□□□ -0.71
SCAMP4-209ENST00000585335 EIF5A2Q9GZV4 153 aaKnown RBP10.6□□□□□ -0.71
SCAMP4-209ENST00000585335 TMEM183BQ1AE95 376 aa10.59□□□□□ -0.71
SCAMP4-209ENST00000585335 RRN3P1Q2M238 152 aa10.59□□□□□ -0.71
SCAMP4-209ENST00000585335 C1orf158Q8N1D5 194 aa10.59□□□□□ -0.71
SCAMP4-209ENST00000585335 C11orf52Q96A22 123 aa10.59□□□□□ -0.71
SCAMP4-209ENST00000585335 LINC00479Q96M42 142 aa10.59□□□□□ -0.71
SCAMP4-209ENST00000585335 ZFP30Q9Y2G7 519 aa10.59□□□□□ -0.71
SCAMP4-209ENST00000585335 KLF12Q9Y4X4 402 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms