RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 KRTAP4-5Q9BYR2 181 aa10.45□□□□□ -0.74
VAPA-209ENST00000585042 C17orf112F2Z3M2 114 aa10.44□□□□□ -0.74
VAPA-209ENST00000585042 IFNA5P01569 189 aa10.44□□□□□ -0.74
VAPA-209ENST00000585042 RPL12P30050 165 aaKnown RBP10.44□□□□□ -0.74
VAPA-209ENST00000585042 OPCMLQ14982 345 aa10.44□□□□□ -0.74
VAPA-209ENST00000585042 MIC13Q5XKP0 118 aa10.44□□□□□ -0.74
VAPA-209ENST00000585042 TMEM37Q8WXS4 190 aa10.44□□□□□ -0.74
VAPA-209ENST00000585042 SAT2Q96F10 170 aaPredicted RBP10.44□□□□□ -0.74
VAPA-209ENST00000585042 UPK3BQ9BT76 320 aa10.44□□□□□ -0.74
VAPA-209ENST00000585042 SLC39A9Q9NUM3 307 aa10.44□□□□□ -0.74
VAPA-209ENST00000585042 MBD2Q9UBB5 411 aa10.44□□□□□ -0.74
VAPA-209ENST00000585042 IGLC2P0DOY2 106 aa10.43□□□□□ -0.74
VAPA-209ENST00000585042 DAZ2Q13117 558 aaKnown RBP10.43□□□□□ -0.74
VAPA-209ENST00000585042 OR5I1Q13606 314 aa10.43□□□□□ -0.74
VAPA-209ENST00000585042 SCGB1C1Q8TD33 95 aa10.43□□□□□ -0.74
VAPA-209ENST00000585042 ATP5SQ99766 215 aa10.43□□□□□ -0.74
VAPA-209ENST00000585042 NPCDR1Q9BY65 106 aa10.43□□□□□ -0.74
VAPA-209ENST00000585042 Q9H3A6 140 aa10.43□□□□□ -0.74
VAPA-209ENST00000585042 HSPB11Q9Y547 144 aa10.43□□□□□ -0.74
VAPA-209ENST00000585042 TRAV26-1A0A087WT03 109 aa10.42□□□□□ -0.74
VAPA-209ENST00000585042 SNURFLB1AK76 121 aa10.42□□□□□ -0.74
VAPA-209ENST00000585042 ZNF253O75346 499 aa10.42□□□□□ -0.74
VAPA-209ENST00000585042 GIPP09681 153 aaPredicted RBP10.42□□□□□ -0.74
VAPA-209ENST00000585042 LEPP41159 167 aa10.42□□□□□ -0.74
VAPA-209ENST00000585042 GFI1BQ5VTD9 330 aa10.42□□□□□ -0.74
VAPA-209ENST00000585042 PYGO2Q9BRQ0 406 aa10.42□□□□□ -0.74
VAPA-209ENST00000585042 C18orf15Q96N68 181 aa10.41□□□□□ -0.74
VAPA-209ENST00000585042 WDR61Q9GZS3 305 aaKnown RBP10.41□□□□□ -0.74
VAPA-209ENST00000585042 GAGE12BA1L429 117 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 PRAC2D3DTV9 90 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 NPIPB6E9PJ23 425 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 H3BQ15 152 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 SLC17A3O00476 420 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 GAGE7O76087 117 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 GAGE12FP0CL80 117 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 GAGE12GP0CL81 117 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 GAGE12IP0CL82 117 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 CT45A10P0DMU9 189 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 KIR3DS1Q14943 382 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 ESRGQ1W209 222 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 MAPKAPK5-AS1Q8N8E1 139 aa10.4□□□□□ -0.74
VAPA-209ENST00000585042 MRPL53Q96EL3 112 aaKnown RBP10.4□□□□□ -0.74
VAPA-209ENST00000585042 MRPS16Q9Y3D3 137 aaKnown RBP10.4□□□□□ -0.74
VAPA-209ENST00000585042 SLC25A5P05141 298 aaKnown RBP10.39□□□□□ -0.75
VAPA-209ENST00000585042 HOXA5P20719 270 aa10.39□□□□□ -0.75
VAPA-209ENST00000585042 MORN5Q5VZ52 161 aa10.39□□□□□ -0.75
VAPA-209ENST00000585042 Q8N1X5 172 aa10.39□□□□□ -0.75
VAPA-209ENST00000585042 INO80EQ8NBZ0 244 aaPredicted RBP10.39□□□□□ -0.75
VAPA-209ENST00000585042 LINC00467Q9BRT7 94 aa10.39□□□□□ -0.75
VAPA-209ENST00000585042 SMIM3Q9BZL3 60 aa10.39□□□□□ -0.75
VAPA-209ENST00000585042 TRAV12-3A0A0B4J271 114 aa10.38□□□□□ -0.75
VAPA-209ENST00000585042 SNRPCP09234 159 aaKnown RBP10.38□□□□□ -0.75
VAPA-209ENST00000585042 SPATA12Q7Z6I5 190 aa10.38□□□□□ -0.75
VAPA-209ENST00000585042 ZNF680Q8NEM1 530 aa10.38□□□□□ -0.75
VAPA-209ENST00000585042 LINC00477Q96M19 166 aa10.38□□□□□ -0.75
VAPA-209ENST00000585042 PARD6GQ9BYG4 376 aaPredicted RBP10.38□□□□□ -0.75
VAPA-209ENST00000585042 PRELID1Q9Y255 219 aa10.38□□□□□ -0.75
VAPA-209ENST00000585042 A0A0J9YY99 117 aa10.37□□□□□ -0.75
VAPA-209ENST00000585042 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
VAPA-209ENST00000585042 ZNF266Q14584 549 aa10.37□□□□□ -0.75
VAPA-209ENST00000585042 ANXA2RQ3ZCQ2 193 aa10.37□□□□□ -0.75
VAPA-209ENST00000585042 OR2T35Q8NGX2 323 aa10.37□□□□□ -0.75
VAPA-209ENST00000585042 KRTAP1-5Q9BYS1 174 aa10.37□□□□□ -0.75
VAPA-209ENST00000585042 ZNF586Q9NXT0 402 aa10.37□□□□□ -0.75
VAPA-209ENST00000585042 TMEM14CQ9P0S9 112 aa10.37□□□□□ -0.75
VAPA-209ENST00000585042 TRBV19A0A075B6N1 114 aa10.36□□□□□ -0.75
VAPA-209ENST00000585042 H3BTX0 84 aa10.36□□□□□ -0.75
VAPA-209ENST00000585042 NMBP08949 121 aa10.36□□□□□ -0.75
VAPA-209ENST00000585042 PDE6HQ13956 83 aa10.36□□□□□ -0.75
VAPA-209ENST00000585042 AQP10Q96PS8 301 aa10.36□□□□□ -0.75
VAPA-209ENST00000585042 MRPL32Q9BYC8 188 aaKnown RBP10.36□□□□□ -0.75
VAPA-209ENST00000585042 ABCA13Q86UQ4 5058 aa10.36□□□□□ -0.75
VAPA-209ENST00000585042 HSPG2P98160 4391 aa10.35□□□□□ -0.75
VAPA-209ENST00000585042 TRGV2A0A075B6R0 118 aa10.35□□□□□ -0.75
VAPA-209ENST00000585042 TRAV5A0A0B4J249 113 aa10.35□□□□□ -0.75
VAPA-209ENST00000585042 C7orf71A4D174 169 aa10.35□□□□□ -0.75
VAPA-209ENST00000585042 KLLNB2CW77 178 aa10.35□□□□□ -0.75
VAPA-209ENST00000585042 ZNF324O75467 553 aaPredicted RBP10.35□□□□□ -0.75
VAPA-209ENST00000585042 HIST1H1EP10412 219 aaKnown RBP10.35□□□□□ -0.75
VAPA-209ENST00000585042 FFAR4Q5NUL3 377 aa10.35□□□□□ -0.75
VAPA-209ENST00000585042 Q6ZTI0 123 aa10.35□□□□□ -0.75
VAPA-209ENST00000585042 FAM19A4Q96LR4 140 aa10.35□□□□□ -0.75
VAPA-209ENST00000585042 TMPRSS5Q9H3S3 457 aa10.35□□□□□ -0.75
VAPA-209ENST00000585042 TIMM9Q9Y5J7 89 aa10.35□□□□□ -0.75
VAPA-209ENST00000585042 FXYD6-FXYD2A0A087WZ82 144 aa10.34□□□□□ -0.75
VAPA-209ENST00000585042 A0A096LPF7 62 aa10.34□□□□□ -0.75
VAPA-209ENST00000585042 J3KRW8 73 aa10.34□□□□□ -0.75
VAPA-209ENST00000585042 SLAQ13239 276 aa10.34□□□□□ -0.75
VAPA-209ENST00000585042 EIF4E3Q8N5X7 224 aaKnown RBP10.34□□□□□ -0.75
VAPA-209ENST00000585042 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
VAPA-209ENST00000585042 VSIG2Q96IQ7 327 aa10.34□□□□□ -0.75
VAPA-209ENST00000585042 GSN-AS1Q9NRJ2 163 aa10.34□□□□□ -0.75
VAPA-209ENST00000585042 FUT9Q9Y231 359 aa10.34□□□□□ -0.75
VAPA-209ENST00000585042 CRISP2P16562 243 aa10.33□□□□□ -0.76
VAPA-209ENST00000585042 TAS2R45P59539 299 aa10.33□□□□□ -0.76
VAPA-209ENST00000585042 ACOT6Q3I5F7 207 aaPredicted RBP10.33□□□□□ -0.76
VAPA-209ENST00000585042 GCSAMLQ5JQS6 135 aa10.33□□□□□ -0.76
VAPA-209ENST00000585042 IBA57Q5T440 356 aaKnown RBP10.33□□□□□ -0.76
VAPA-209ENST00000585042 C9orf47Q6ZRZ4 202 aa10.33□□□□□ -0.76
VAPA-209ENST00000585042 BORCS7-ASMTA0A0B4J1R7 106 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms