RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 ZNF816Q0VGE8 651 aaPredicted RBP9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 KLRB1Q12918 225 aa9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 PRSS3P2Q8NHM4 247 aa9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 RND1Q92730 232 aa9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 HIST1H4GQ99525 98 aa9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 EPDR1Q9UM22 224 aa9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 A0A096LNJ9 63 aa9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 FAM236AA0A1B0GUQ0 79 aa9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 FAM236BA0A1B0GV22 79 aa9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 ZFP2Q6ZN57 461 aa9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 FGFRL1Q8N441 504 aa9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 FAM57AQ8TBR7 257 aa9.43□□□□□ -0.9
CDK5RAP3-232ENST00000584168 TRBV6-6A0A0A6YYG2 114 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 TRGV8A0A0C4DH27 118 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 UQCRQO14949 82 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 CD7P09564 240 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 COL8A2P25067 703 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 MGST2Q99735 147 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 TMEM167BQ9NRX6 74 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 RBAKDNA6NC62 111 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 HOXA4Q00056 320 aaPredicted RBP9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 ZNF672Q499Z4 452 aaPredicted RBP9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 LYRM7Q5U5X0 104 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 LINC00596Q86U02 117 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 LINC00526Q96FQ7 95 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 DKK2Q9UBU2 259 aa9.42□□□□□ -0.9
CDK5RAP3-232ENST00000584168 V9GYY9 64 aa9.41□□□□□ -0.9
CDK5RAP3-232ENST00000584168 UTP20O75691 2785 aaKnown RBP9.41□□□□□ -0.9
CDK5RAP3-232ENST00000584168 TRAV2A0A0B4J234 112 aa9.41□□□□□ -0.9
CDK5RAP3-232ENST00000584168 A0A0G2JNJ9 132 aa9.41□□□□□ -0.9
CDK5RAP3-232ENST00000584168 ACTL6BO94805 426 aa9.41□□□□□ -0.9
CDK5RAP3-232ENST00000584168 RPL35AP18077 110 aaKnown RBP9.41□□□□□ -0.9
CDK5RAP3-232ENST00000584168 KLF17Q5JT82 389 aaPredicted RBP9.41□□□□□ -0.9
CDK5RAP3-232ENST00000584168 RFESDQ8TAC1 157 aa9.41□□□□□ -0.9
CDK5RAP3-232ENST00000584168 Q9UFV3 132 aa9.41□□□□□ -0.9
CDK5RAP3-232ENST00000584168 CA6P23280 308 aa9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 HSPE1P61604 102 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 SRSF9Q13242 221 aaKnown RBP eCLIP9.4□□□□□ -0.92e-12■■□□□ 12.4
CDK5RAP3-232ENST00000584168 Q5XG85 94 aa9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 SFTA2Q6UW10 78 aa9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 Q6ZT83 130 aa9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 SSMEM1Q8WWF3 244 aa9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 IFI27L1Q96BM0 104 aa9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 COQ2Q96H96 371 aa9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 PGLYRP4Q96LB8 373 aa9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 PKDREJQ9NTG1 2253 aa9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 ZNF493Q6ZR52 646 aa9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 PLEKHA3Q9HB20 300 aa9.4□□□□□ -0.9
CDK5RAP3-232ENST00000584168 TRAV8-4A0A0B4J246 113 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 MYMXA0A1B0GTQ4 84 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 UBE2D3P61077 147 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 UBE2D2P62837 147 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 TEX36Q5VZQ5 186 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 GAGE2AQ6NT46 116 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 DRAM1Q8N682 238 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 WDR31Q8NA23 367 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 MBD3L2Q8NHZ7 208 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 NPIPB3Q92617 1050 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 NPIPB11E5RHQ5 1161 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 LOXL1Q08397 574 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 CDSNQ15517 529 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 MIR17HGQ75NE6 70 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 OR11H6Q8NGC7 330 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 IGFBPL1Q8WX77 278 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 PKIGQ9Y2B9 76 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 FLNCQ14315 2725 aa9.39□□□□□ -0.91
CDK5RAP3-232ENST00000584168 TRBV7-3A0A075B6L6 115 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 TCL1BO95988 128 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 HLA-DRB4P13762 266 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 ZNF415Q09FC8 603 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 SPINK9Q5DT21 86 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 RITA1Q96K30 269 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 SLC25A10Q9UBX3 287 aaPredicted RBP9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 HLA-DRB4X5D2U9 266 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 LINC01549A6NIU2 74 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 SHISA9B4DS77 424 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 ZNF497Q6ZNH5 498 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 ZNF503Q96F45 646 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 HHLA3Q9XRX5 114 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 DCHS2Q6V1P9 2916 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 PLCE1Q9P212 2302 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 ABCA4P78363 2273 aa9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 GRNP28799 593 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-232ENST00000584168 HIVEP3Q5T1R4 2406 aa9.37□□□□□ -0.91
CDK5RAP3-232ENST00000584168 M0R1B8 84 aa9.37□□□□□ -0.91
CDK5RAP3-232ENST00000584168 PRB1P04280 392 aa9.37□□□□□ -0.91
CDK5RAP3-232ENST00000584168 IFI27P40305 119 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-232ENST00000584168 JPT2Q9H910 190 aa9.37□□□□□ -0.91
CDK5RAP3-232ENST00000584168 J3QT63 122 aa9.37□□□□□ -0.91
CDK5RAP3-232ENST00000584168 NPYP01303 97 aa9.37□□□□□ -0.91
CDK5RAP3-232ENST00000584168 GTSCR1Q86UQ5 136 aa9.37□□□□□ -0.91
CDK5RAP3-232ENST00000584168 RPP21Q9H633 154 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-232ENST00000584168 USF3Q68DE3 2245 aa9.36□□□□□ -0.91
CDK5RAP3-232ENST00000584168 TRBV7-7A0A0K0K1E9 115 aa9.36□□□□□ -0.91
CDK5RAP3-232ENST00000584168 SLC25A20O43772 301 aa9.36□□□□□ -0.91
CDK5RAP3-232ENST00000584168 HBDP02042 147 aa9.36□□□□□ -0.91
CDK5RAP3-232ENST00000584168 Q8N1Y9 231 aa9.36□□□□□ -0.91
CDK5RAP3-232ENST00000584168 MAPKAPK5-AS1Q8N8E1 139 aa9.36□□□□□ -0.91
CDK5RAP3-232ENST00000584168 DPH3Q96FX2 82 aa9.36□□□□□ -0.91
CDK5RAP3-232ENST00000584168 AKAP6Q13023 2319 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms