RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 NPIPB6E9PJ23 425 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 PRAF2O60831 178 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 UPK1BO75841 260 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 CYCSP99999 105 aaKnown RBP7.81□□□□□ -1.16
CCDC47-206ENST00000584112 PDE6HQ13956 83 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 SOHLH1Q5JUK2 328 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 GFI1BQ5VTD9 330 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 FRZBQ92765 325 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 NPCDR1Q9BY65 106 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 NMES1Q9C002 83 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 NOP10Q9NPE3 64 aaKnown RBP7.81□□□□□ -1.16
CCDC47-206ENST00000584112 KCNIP2Q9NS61 270 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 ZNF586Q9NXT0 402 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 TRBV19A0A075B6N1 114 aa7.8□□□□□ -1.16
CCDC47-206ENST00000584112 SNURFLB1AK76 121 aa7.8□□□□□ -1.16
CCDC47-206ENST00000584112 HIST1H1EP10412 219 aaKnown RBP7.8□□□□□ -1.16
CCDC47-206ENST00000584112 FCN2Q15485 313 aa7.8□□□□□ -1.16
CCDC47-206ENST00000584112 Q6ZR54 194 aa7.8□□□□□ -1.16
CCDC47-206ENST00000584112 OR5C1Q8NGR4 320 aa7.8□□□□□ -1.16
CCDC47-206ENST00000584112 PARD6GQ9BYG4 376 aaPredicted RBP7.8□□□□□ -1.16
CCDC47-206ENST00000584112 AAMDCQ9H7C9 122 aa7.8□□□□□ -1.16
CCDC47-206ENST00000584112 TIMM9Q9Y5J7 89 aa7.8□□□□□ -1.16
CCDC47-206ENST00000584112 NUDT3O95989 172 aa7.79□□□□□ -1.16
CCDC47-206ENST00000584112 SLC25A5P05141 298 aaKnown RBP7.79□□□□□ -1.16
CCDC47-206ENST00000584112 CT45A10P0DMU9 189 aa7.79□□□□□ -1.16
CCDC47-206ENST00000584112 NHLH2Q02577 135 aa7.79□□□□□ -1.16
CCDC47-206ENST00000584112 KIR3DS1Q14943 382 aa7.79□□□□□ -1.16
CCDC47-206ENST00000584112 LYPD1Q8N2G4 141 aa7.79□□□□□ -1.16
CCDC47-206ENST00000584112 PYGO2Q9BRQ0 406 aa7.79□□□□□ -1.16
CCDC47-206ENST00000584112 PTTG2Q9NZH5 202 aa7.79□□□□□ -1.16
CCDC47-206ENST00000584112 PKHD1L1Q86WI1 4243 aa7.79□□□□□ -1.16
CCDC47-206ENST00000584112 TRAV12-3A0A0B4J271 114 aa7.78□□□□□ -1.16
CCDC47-206ENST00000584112 INMT-MINDY4F8WBC2 141 aa7.78□□□□□ -1.16
CCDC47-206ENST00000584112 J3KRW8 73 aa7.78□□□□□ -1.16
CCDC47-206ENST00000584112 SIX6O95475 246 aa7.78□□□□□ -1.16
CCDC47-206ENST00000584112 PYYP10082 97 aa7.78□□□□□ -1.16
CCDC47-206ENST00000584112 CCL18P55774 89 aa7.78□□□□□ -1.16
CCDC47-206ENST00000584112 LRRC37A5PQ49AS3 106 aa7.78□□□□□ -1.16
CCDC47-206ENST00000584112 SPATA12Q7Z6I5 190 aa7.78□□□□□ -1.16
CCDC47-206ENST00000584112 THAP6Q8TBB0 222 aa7.78□□□□□ -1.16
CCDC47-206ENST00000584112 LINC00477Q96M19 166 aa7.78□□□□□ -1.16
CCDC47-206ENST00000584112 C7orf71A4D174 169 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 KRTAP29-1A8MX34 341 aaPredicted RBP7.77□□□□□ -1.17
CCDC47-206ENST00000584112 C17orf112F2Z3M2 114 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 M0R3E3 92 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 NDUFB4O95168 129 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 PET100P0DJ07 73 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 DEFA1P59665 94 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 DEFA3P59666 94 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 DAZ2Q13117 558 aaKnown RBP7.77□□□□□ -1.17
CCDC47-206ENST00000584112 CLINT1Q14677 625 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 GCSAMLQ5JQS6 135 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 C1orf134Q5TEV5 83 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 LINC00612Q8N6U2 182 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 ZNF680Q8NEM1 530 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 BLNKQ8WV28 456 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 SLC25A2Q9BXI2 301 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 MRPL32Q9BYC8 188 aaKnown RBP7.77□□□□□ -1.17
CCDC47-206ENST00000584112 WDR61Q9GZS3 305 aaKnown RBP7.77□□□□□ -1.17
CCDC47-206ENST00000584112 OR5AC2Q9NZP5 309 aa7.77□□□□□ -1.17
CCDC47-206ENST00000584112 GAGE12BA1L429 117 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 KLLNB2CW77 178 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 GAGE7O76087 117 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 NMBP08949 121 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 NBEAP1P0C6P0 100 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 GAGE12FP0CL80 117 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 GAGE12GP0CL81 117 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 GAGE12IP0CL82 117 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 M6PRP20645 277 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 ERCC8Q13216 396 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 OR5I1Q13606 314 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 TMEM78Q5T7P6 136 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 C9orf47Q6ZRZ4 202 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 EXOC3-AS1Q8N2X6 119 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 RNF141Q8WVD5 230 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 GNPNAT1Q96EK6 184 aaPredicted RBP7.76□□□□□ -1.17
CCDC47-206ENST00000584112 MARVELD1Q9BSK0 173 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 OR51M1Q9H341 326 aa7.76□□□□□ -1.17
CCDC47-206ENST00000584112 H0YIZ8 118 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 H3BNG1 76 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 SSNA1O43805 119 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 SMR3BP02814 79 aaPredicted RBP7.75□□□□□ -1.17
CCDC47-206ENST00000584112 GPX1P07203 203 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 XGP55808 180 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 IFITM3Q01628 133 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 ICAM4Q14773 271 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 MIR17HGQ75NE6 70 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 EIF4E3Q8N5X7 224 aaKnown RBP7.75□□□□□ -1.17
CCDC47-206ENST00000584112 ZNRF2Q8NHG8 242 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 RXFP4Q8TDU9 374 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 PPP1R1CQ8WVI7 109 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 FAM167A-AS1Q96KT0 104 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 FAM19A4Q96LR4 140 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 ATP5SQ99766 215 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 LINC00467Q9BRT7 94 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 PAXXQ9BUH6 204 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 AGPAT4-IT1Q9H0P7 198 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 FUT9Q9Y231 359 aa7.75□□□□□ -1.17
CCDC47-206ENST00000584112 TRAV26-1A0A087WT03 109 aa7.74□□□□□ -1.17
CCDC47-206ENST00000584112 NBDYA0A0U1RRE5 68 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms