RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 RNF141Q8WVD5 230 aa15.09■□□□□ 0.01
PPP4R1-228ENST00000584074 LINC00477Q96M19 166 aa15.09■□□□□ 0.01
PPP4R1-228ENST00000584074 WFDC1Q9HC57 220 aa15.09■□□□□ 0.01
PPP4R1-228ENST00000584074 SLC25A5P05141 298 aaKnown RBP15.08■□□□□ 0
PPP4R1-228ENST00000584074 C15orf53Q8NAA6 179 aa15.08■□□□□ 0
PPP4R1-228ENST00000584074 PHYHIPLQ96FC7 376 aa15.08■□□□□ 0
PPP4R1-228ENST00000584074 FAM19A4Q96LR4 140 aa15.08■□□□□ 0
PPP4R1-228ENST00000584074 OR7C2O60412 319 aa15.07■□□□□ 0
PPP4R1-228ENST00000584074 CD300CQ08708 224 aa15.07■□□□□ 0
PPP4R1-228ENST00000584074 RNF212Q495C1 297 aa15.07■□□□□ 0
PPP4R1-228ENST00000584074 C9orf47Q6ZRZ4 202 aa15.07■□□□□ 0
PPP4R1-228ENST00000584074 ZNF503Q96F45 646 aa15.07■□□□□ 0
PPP4R1-228ENST00000584074 VGLL1Q99990 258 aa15.07■□□□□ 0
PPP4R1-228ENST00000584074 PYGO2Q9BRQ0 406 aa15.07■□□□□ 0
PPP4R1-228ENST00000584074 FAT2Q9NYQ8 4349 aa15.06■□□□□ 0
PPP4R1-228ENST00000584074 IGLV2-18A0A075B6J9 118 aa15.06■□□□□ 0
PPP4R1-228ENST00000584074 C7orf71A4D174 169 aa15.06■□□□□ 0
PPP4R1-228ENST00000584074 KLLNB2CW77 178 aa15.06■□□□□ 0
PPP4R1-228ENST00000584074 BTN1A1Q13410 526 aa15.06■□□□□ 0
PPP4R1-228ENST00000584074 SNURFLB1AK76 121 aa15.05■□□□□ -0
PPP4R1-228ENST00000584074 EIF3GO75821 320 aaKnown RBP eCLIP15.05■□□□□ -0
PPP4R1-228ENST00000584074 PTTG1O95997 202 aa15.05■□□□□ -0
PPP4R1-228ENST00000584074 RNASE4P34096 147 aaKnown RBP15.05■□□□□ -0
PPP4R1-228ENST00000584074 RANP62826 216 aaKnown RBP15.05■□□□□ -0
PPP4R1-228ENST00000584074 LINC00612Q8N6U2 182 aa15.05■□□□□ -0
PPP4R1-228ENST00000584074 GAGE12BA1L429 117 aa15.04■□□□□ -0
PPP4R1-228ENST00000584074 ZNF324O75467 553 aaPredicted RBP15.04■□□□□ -0
PPP4R1-228ENST00000584074 GAGE7O76087 117 aa15.04■□□□□ -0
PPP4R1-228ENST00000584074 NUDT3O95989 172 aa15.04■□□□□ -0
PPP4R1-228ENST00000584074 GAGE12FP0CL80 117 aa15.04■□□□□ -0
PPP4R1-228ENST00000584074 GAGE12GP0CL81 117 aa15.04■□□□□ -0
PPP4R1-228ENST00000584074 GAGE12IP0CL82 117 aa15.04■□□□□ -0
PPP4R1-228ENST00000584074 UBE2L3P68036 154 aaKnown RBP15.04■□□□□ -0
PPP4R1-228ENST00000584074 TMEM78Q5T7P6 136 aa15.04■□□□□ -0
PPP4R1-228ENST00000584074 DNAH17Q9UFH2 4485 aa15.04■□□□□ -0
PPP4R1-228ENST00000584074 GPX1P07203 203 aa15.03■□□□□ -0
PPP4R1-228ENST00000584074 CRISP2P16562 243 aa15.03■□□□□ -0
PPP4R1-228ENST00000584074 LGALS9BQ3B8N2 356 aa15.03■□□□□ -0
PPP4R1-228ENST00000584074 PRR9Q5T870 116 aa15.03■□□□□ -0
PPP4R1-228ENST00000584074 ZFAND2AQ8N6M9 145 aa15.03■□□□□ -0
PPP4R1-228ENST00000584074 KHDC3LQ587J8 217 aa15.02■□□□□ -0
PPP4R1-228ENST00000584074 Q8TAT8 98 aa15.02■□□□□ -0
PPP4R1-228ENST00000584074 Q9H3A6 140 aa15.02■□□□□ -0
PPP4R1-228ENST00000584074 GSN-AS1Q9NRJ2 163 aa15.02■□□□□ -0
PPP4R1-228ENST00000584074 ZNF492Q9P255 531 aa15.02■□□□□ -0
PPP4R1-228ENST00000584074 NMBP08949 121 aa15.01□□□□□ -0.01
PPP4R1-228ENST00000584074 ZNF138P52744 262 aa15.01□□□□□ -0.01
PPP4R1-228ENST00000584074 DAZ2Q13117 558 aaKnown RBP15.01□□□□□ -0.01
PPP4R1-228ENST00000584074 OR5I1Q13606 314 aa15.01□□□□□ -0.01
PPP4R1-228ENST00000584074 Q6ZQT7 251 aa15.01□□□□□ -0.01
PPP4R1-228ENST00000584074 Q6ZR54 194 aa15.01□□□□□ -0.01
PPP4R1-228ENST00000584074 LINC00336Q6ZUF6 198 aa15.01□□□□□ -0.01
PPP4R1-228ENST00000584074 LINC00467Q9BRT7 94 aa15.01□□□□□ -0.01
PPP4R1-228ENST00000584074 ATG101Q9BSB4 218 aa15.01□□□□□ -0.01
PPP4R1-228ENST00000584074 MED28Q9H204 178 aa15.01□□□□□ -0.01
PPP4R1-228ENST00000584074 RTL8CO15255 209 aa15□□□□□ -0.01
PPP4R1-228ENST00000584074 HOXA5P20719 270 aa15□□□□□ -0.01
PPP4R1-228ENST00000584074 CSN1S1P47710 185 aa15□□□□□ -0.01
PPP4R1-228ENST00000584074 TAS2R45P59539 299 aa15□□□□□ -0.01
PPP4R1-228ENST00000584074 Q6ZTI0 123 aa15□□□□□ -0.01
PPP4R1-228ENST00000584074 LYPD1Q8N2G4 141 aa15□□□□□ -0.01
PPP4R1-228ENST00000584074 EIF4E3Q8N5X7 224 aaKnown RBP15□□□□□ -0.01
PPP4R1-228ENST00000584074 C11orf72Q8NBR9 251 aa15□□□□□ -0.01
PPP4R1-228ENST00000584074 M6PRP20645 277 aa14.99□□□□□ -0.01
PPP4R1-228ENST00000584074 ACOT6Q3I5F7 207 aaPredicted RBP14.99□□□□□ -0.01
PPP4R1-228ENST00000584074 ZNF680Q8NEM1 530 aa14.99□□□□□ -0.01
PPP4R1-228ENST00000584074 TRAV26-1A0A087WT03 109 aa14.98□□□□□ -0.01
PPP4R1-228ENST00000584074 RAB2AP61019 212 aa14.98□□□□□ -0.01
PPP4R1-228ENST00000584074 ANXA2RQ3ZCQ2 193 aa14.98□□□□□ -0.01
PPP4R1-228ENST00000584074 TMPRSS5Q9H3S3 457 aa14.98□□□□□ -0.01
PPP4R1-228ENST00000584074 A0A1W2PPV4 95 aa14.97□□□□□ -0.01
PPP4R1-228ENST00000584074 FAM3BP58499 235 aaPredicted RBP14.97□□□□□ -0.01
PPP4R1-228ENST00000584074 Q5BKY6 102 aa14.97□□□□□ -0.01
PPP4R1-228ENST00000584074 HYLS1Q96M11 299 aa14.97□□□□□ -0.01
PPP4R1-228ENST00000584074 TP53TG3Q9ULZ0 132 aa14.97□□□□□ -0.01
PPP4R1-228ENST00000584074 KLF12Q9Y4X4 402 aa14.97□□□□□ -0.01
PPP4R1-228ENST00000584074 A0A0J9YY99 117 aa14.96□□□□□ -0.01
PPP4R1-228ENST00000584074 RBAKDNA6NC62 111 aa14.96□□□□□ -0.01
PPP4R1-228ENST00000584074 DIRC3C9JPN6 131 aa14.96□□□□□ -0.01
PPP4R1-228ENST00000584074 RGS13O14921 159 aa14.96□□□□□ -0.01
PPP4R1-228ENST00000584074 HMGB3O15347 200 aaKnown RBP14.96□□□□□ -0.01
PPP4R1-228ENST00000584074 OR10G4Q8NGN3 311 aa14.96□□□□□ -0.01
PPP4R1-228ENST00000584074 OR10G9Q8NGN4 311 aa14.96□□□□□ -0.01
PPP4R1-228ENST00000584074 OR10G7Q8NGN6 311 aa14.96□□□□□ -0.01
PPP4R1-228ENST00000584074 GNPNAT1Q96EK6 184 aaPredicted RBP14.96□□□□□ -0.01
PPP4R1-228ENST00000584074 AQP10Q96PS8 301 aa14.96□□□□□ -0.01
PPP4R1-228ENST00000584074 IGHV1OR15-1A0A075B7D0 117 aa14.95□□□□□ -0.02
PPP4R1-228ENST00000584074 TRBV7-9A0A0J9YWB2 115 aa14.95□□□□□ -0.02
PPP4R1-228ENST00000584074 PRSS29PA6NIE9 313 aa14.95□□□□□ -0.02
PPP4R1-228ENST00000584074 CCL18P55774 89 aa14.95□□□□□ -0.02
PPP4R1-228ENST00000584074 HSD17B11Q8NBQ5 300 aa14.95□□□□□ -0.02
PPP4R1-228ENST00000584074 ZNRF2Q8NHG8 242 aa14.95□□□□□ -0.02
PPP4R1-228ENST00000584074 OTORQ9NRC9 128 aa14.95□□□□□ -0.02
PPP4R1-228ENST00000584074 LINC00588Q9Y4M8 146 aa14.95□□□□□ -0.02
PPP4R1-228ENST00000584074 TRGV2A0A075B6R0 118 aa14.94□□□□□ -0.02
PPP4R1-228ENST00000584074 TRGV1A0A0A0MS02 117 aa14.94□□□□□ -0.02
PPP4R1-228ENST00000584074 A0A1B0GVY2 172 aa14.94□□□□□ -0.02
PPP4R1-228ENST00000584074 PGPA6NDG6 321 aa14.94□□□□□ -0.02
PPP4R1-228ENST00000584074 TCL1AP56279 114 aa14.94□□□□□ -0.02
PPP4R1-228ENST00000584074 ZNF266Q14584 549 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms