RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 CLRN3Q8NCR9 226 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 SFT2D1Q8WV19 159 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 GGACTQ9BVM4 153 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 SEPSECSQ9HD40 501 aaKnown RBP5.34□□□□□ -1.55
CCDC47-205ENST00000582331 HEYLQ9NQ87 328 aaPredicted RBP5.34□□□□□ -1.55
CCDC47-205ENST00000582331 GOLT1BQ9Y3E0 138 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 YTHDF2Q9Y5A9 579 aaKnown RBP5.34□□□□□ -1.55
CCDC47-205ENST00000582331 HLA-DRB4X5D2U9 266 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 VPS13BQ7Z7G8 4022 aa5.34□□□□□ -1.55
CCDC47-205ENST00000582331 INS-IGF2F8WCM5 200 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 NUDT3O95989 172 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 IGKV3-20P01619 116 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 FGF7P21781 194 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 XGP55808 180 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 RPP30P78346 268 aaKnown RBP5.33□□□□□ -1.56
CCDC47-205ENST00000582331 PRCDQ00LT1 54 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 BSXQ3C1V8 233 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 C16orf54Q6UWD8 224 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 LCN15Q6UWW0 184 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.33□□□□□ -1.56
CCDC47-205ENST00000582331 NPCDR1Q9BY65 106 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 EIF5A2Q9GZV4 153 aaKnown RBP5.33□□□□□ -1.56
CCDC47-205ENST00000582331 SLC35B3Q9H1N7 401 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 Q9H8V8 135 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 LINC00588Q9Y4M8 146 aa5.33□□□□□ -1.56
CCDC47-205ENST00000582331 CTXND1A0A1B0GTU2 59 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 LOC105371267A0A1B0GV96 52 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 MAP1LC3B2A6NCE7 125 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 FNDC10F2Z333 226 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 CLN5O75503 358 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 SCGB2A1O75556 95 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 MBP02144 154 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 RNASE2P10153 161 aaKnown RBP5.32□□□□□ -1.56
CCDC47-205ENST00000582331 ATP5IP56385 69 aaPredicted RBP5.32□□□□□ -1.56
CCDC47-205ENST00000582331 RAB11AP62491 216 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 RRN3P1Q2M238 152 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 C2orf83Q53S99 150 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 KHDC3LQ587J8 217 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 TTC32Q5I0X7 151 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 FFAR4Q5NUL3 377 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 SLC24A4Q8NFF2 622 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 OR10G4Q8NGN3 311 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 RXFP4Q8TDU9 374 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 GLMPQ8WWB7 406 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 MAP1LC3BQ9GZQ8 125 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 NRN1Q9NPD7 142 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 SLC39A9Q9NUM3 307 aa5.32□□□□□ -1.56
CCDC47-205ENST00000582331 SRRM2Q9UQ35 2752 aaKnown RBP5.31□□□□□ -1.56
CCDC47-205ENST00000582331 TRAV30A0A087WSZ9 112 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 C17orf112F2Z3M2 114 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 F5H768 121 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 CORTO00230 105 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 MPDU1O75352 247 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 EIF3GO75821 320 aaKnown RBP eCLIP5.31□□□□□ -1.56
CCDC47-205ENST00000582331 BCL2P10415 239 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 OPRK1P41145 380 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 SUB1P53999 127 aaKnown RBP eCLIP5.31□□□□□ -1.56
CCDC47-205ENST00000582331 FGF8P55075 233 aaPredicted RBP5.31□□□□□ -1.56
CCDC47-205ENST00000582331 TIGITQ495A1 244 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 GDF5OSQ5U4N7 250 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 CBLN2Q8IUK8 224 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 C1orf158Q8N1D5 194 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 ZNF709Q8N972 641 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 OR4B1Q8NGF8 309 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 OR10G9Q8NGN4 311 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 OR10G7Q8NGN6 311 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 OR4X1Q8NH49 305 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 Q8WTZ3 238 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 RAB24Q969Q5 203 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 CLUHP3Q96NS8 147 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 MGST2Q99735 147 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 ACTR3CQ9C0K3 210 aaPredicted RBP5.31□□□□□ -1.56
CCDC47-205ENST00000582331 NPVFQ9HCQ7 196 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 ENY2Q9NPA8 101 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 MRPL36Q9P0J6 103 aaKnown RBP5.31□□□□□ -1.56
CCDC47-205ENST00000582331 GNG13Q9P2W3 67 aa5.31□□□□□ -1.56
CCDC47-205ENST00000582331 C7orf77A4D0Y5 90 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 COLCA2A8K830 154 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 NDUFS6O75380 124 aaKnown RBP5.3□□□□□ -1.56
CCDC47-205ENST00000582331 IGKV1-17P01599 117 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 LINC00869P0C866 280 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 DEFB1P60022 68 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 PSG9Q00887 426 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 USF2Q15853 346 aaPredicted RBP5.3□□□□□ -1.56
CCDC47-205ENST00000582331 ACOT6Q3I5F7 207 aaPredicted RBP5.3□□□□□ -1.56
CCDC47-205ENST00000582331 GCSAMLQ5JQS6 135 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 MIC13Q5XKP0 118 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 FAM122CQ6P4D5 195 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 SIGLEC15Q6ZMC9 328 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 FOXI2Q6ZQN5 318 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 TMEM208Q9BTX3 173 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 KRTAP1-5Q9BYS1 174 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 TMPRSS5Q9H3S3 457 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 SAV1Q9H4B6 383 aaPredicted RBP5.3□□□□□ -1.56
CCDC47-205ENST00000582331 FNDC4Q9H6D8 234 aaPredicted RBP5.3□□□□□ -1.56
CCDC47-205ENST00000582331 SLC25A22Q9H936 323 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 MDFICQ9P1T7 246 aa5.3□□□□□ -1.56
CCDC47-205ENST00000582331 A0A1W2PPQ1 181 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 SMCO3A2RU48 225 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 ZFP92A6NM28 416 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms