RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 FAM210BQ96KR6 192 aa14.93□□□□□ -0.02
CCDC42-203ENST00000581598 TRAV8-2A0A0B4J237 113 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 HMGB3O15347 200 aaKnown RBP14.92□□□□□ -0.02
CCDC42-203ENST00000581598 CXorf1O96002 111 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 HBE1P02100 147 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 NMBP08949 121 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 ARL14EPLP0DKL9 152 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 P0DMU3 169 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 FAM231AP0DMU4 169 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 FAM231CP0DMU5 169 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 EMP1P54849 157 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 LYPD6BQ8NI32 183 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 IGF2BP2-AS1Q96M15 143 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 OR51M1Q9H341 326 aa14.92□□□□□ -0.02
CCDC42-203ENST00000581598 OR7C2O60412 319 aa14.91□□□□□ -0.02
CCDC42-203ENST00000581598 IGLC2P0DOY2 106 aa14.91□□□□□ -0.02
CCDC42-203ENST00000581598 RRN3P1Q2M238 152 aa14.91□□□□□ -0.02
CCDC42-203ENST00000581598 FAM222AQ5U5X8 452 aa14.91□□□□□ -0.02
CCDC42-203ENST00000581598 SUN5Q8TC36 379 aa14.91□□□□□ -0.02
CCDC42-203ENST00000581598 SFT2D1Q8WV19 159 aa14.91□□□□□ -0.02
CCDC42-203ENST00000581598 FXYD5Q96DB9 178 aa14.91□□□□□ -0.02
CCDC42-203ENST00000581598 NIPSNAP3BQ9BS92 247 aa14.91□□□□□ -0.02
CCDC42-203ENST00000581598 PAXXQ9BUH6 204 aa14.91□□□□□ -0.02
CCDC42-203ENST00000581598 A0A087X0K7 114 aa14.9□□□□□ -0.02
CCDC42-203ENST00000581598 LOC102723971A0A1B0GUV8 181 aa14.9□□□□□ -0.02
CCDC42-203ENST00000581598 PYYP10082 97 aa14.9□□□□□ -0.02
CCDC42-203ENST00000581598 GCHFRP30047 84 aa14.9□□□□□ -0.02
CCDC42-203ENST00000581598 CNN1P51911 297 aaKnown RBP14.9□□□□□ -0.02
CCDC42-203ENST00000581598 POM121L12Q8N7R1 296 aa14.9□□□□□ -0.02
CCDC42-203ENST00000581598 HIST1H1EP10412 219 aaKnown RBP14.89□□□□□ -0.03
CCDC42-203ENST00000581598 FGF8P55075 233 aaPredicted RBP14.89□□□□□ -0.03
CCDC42-203ENST00000581598 H3BQ15 152 aa14.88□□□□□ -0.03
CCDC42-203ENST00000581598 CRXO43186 299 aaPredicted RBP14.88□□□□□ -0.03
CCDC42-203ENST00000581598 UBE2L3P68036 154 aaKnown RBP14.88□□□□□ -0.03
CCDC42-203ENST00000581598 RNF182Q8N6D2 247 aa14.88□□□□□ -0.03
CCDC42-203ENST00000581598 YTHDF2Q9Y5A9 579 aaKnown RBP14.88□□□□□ -0.03
CCDC42-203ENST00000581598 TEX46H3BTG2 121 aa14.87□□□□□ -0.03
CCDC42-203ENST00000581598 OR10J4P0C629 311 aa14.87□□□□□ -0.03
CCDC42-203ENST00000581598 CLLU1Q5K131 121 aa14.87□□□□□ -0.03
CCDC42-203ENST00000581598 IGFL4Q6B9Z1 124 aa14.87□□□□□ -0.03
CCDC42-203ENST00000581598 TMEM167BQ9NRX6 74 aa14.87□□□□□ -0.03
CCDC42-203ENST00000581598 ZNF586Q9NXT0 402 aa14.87□□□□□ -0.03
CCDC42-203ENST00000581598 INSP01308 110 aa14.86□□□□□ -0.03
CCDC42-203ENST00000581598 NBEAP1P0C6P0 100 aa14.86□□□□□ -0.03
CCDC42-203ENST00000581598 CCL20P78556 96 aa14.86□□□□□ -0.03
CCDC42-203ENST00000581598 GUK1Q16774 197 aa14.86□□□□□ -0.03
CCDC42-203ENST00000581598 LINC00336Q6ZUF6 198 aa14.86□□□□□ -0.03
CCDC42-203ENST00000581598 ZNF738Q8NE65 137 aa14.86□□□□□ -0.03
CCDC42-203ENST00000581598 PCNPQ8WW12 178 aaKnown RBP14.86□□□□□ -0.03
CCDC42-203ENST00000581598 TMEM208Q9BTX3 173 aa14.86□□□□□ -0.03
CCDC42-203ENST00000581598 TMPRSS5Q9H3S3 457 aa14.86□□□□□ -0.03
CCDC42-203ENST00000581598 HECTD4Q9Y4D8 3996 aa14.85□□□□□ -0.03
CCDC42-203ENST00000581598 TRBV19A0A075B6N1 114 aa14.85□□□□□ -0.03
CCDC42-203ENST00000581598 ZNF253O75346 499 aa14.85□□□□□ -0.03
CCDC42-203ENST00000581598 RAB14P61106 215 aa14.85□□□□□ -0.03
CCDC42-203ENST00000581598 PDE6HQ13956 83 aa14.85□□□□□ -0.03
CCDC42-203ENST00000581598 SPINK13Q1W4C9 94 aa14.85□□□□□ -0.03
CCDC42-203ENST00000581598 PCLOQ9Y6V0 5065 aa14.84□□□□□ -0.03
CCDC42-203ENST00000581598 KIAA1109Q2LD37 5005 aa14.84□□□□□ -0.03
CCDC42-203ENST00000581598 A0A1B0GV50 99 aa14.84□□□□□ -0.03
CCDC42-203ENST00000581598 M0R2Z0 102 aa14.84□□□□□ -0.03
CCDC42-203ENST00000581598 NDUFB4O95168 129 aa14.84□□□□□ -0.03
CCDC42-203ENST00000581598 TSPOP30536 169 aa14.84□□□□□ -0.03
CCDC42-203ENST00000581598 PSG3Q16557 428 aa14.84□□□□□ -0.03
CCDC42-203ENST00000581598 OR8A1Q8NGG7 326 aa14.84□□□□□ -0.03
CCDC42-203ENST00000581598 ARL2-SNX15V9GYD0 113 aa14.84□□□□□ -0.03
CCDC42-203ENST00000581598 PPT1P50897 306 aa14.83□□□□□ -0.04
CCDC42-203ENST00000581598 LYRM9A8MSI8 78 aa14.82□□□□□ -0.04
CCDC42-203ENST00000581598 SLC17A3O00476 420 aa14.82□□□□□ -0.04
CCDC42-203ENST00000581598 SNRPCP09234 159 aaKnown RBP14.82□□□□□ -0.04
CCDC42-203ENST00000581598 DAD1P61803 113 aa14.82□□□□□ -0.04
CCDC42-203ENST00000581598 IQCF2Q8IXL9 164 aa14.82□□□□□ -0.04
CCDC42-203ENST00000581598 TMEM256Q8N2U0 113 aa14.82□□□□□ -0.04
CCDC42-203ENST00000581598 SLC50A1Q9BRV3 221 aa14.82□□□□□ -0.04
CCDC42-203ENST00000581598 ZNF331Q9NQX6 463 aaPredicted RBP14.82□□□□□ -0.04
CCDC42-203ENST00000581598 H3BTX0 84 aa14.81□□□□□ -0.04
CCDC42-203ENST00000581598 HIST1H1AQ02539 215 aaPredicted RBP14.81□□□□□ -0.04
CCDC42-203ENST00000581598 LGALS9BQ3B8N2 356 aa14.81□□□□□ -0.04
CCDC42-203ENST00000581598 RNF212Q495C1 297 aa14.81□□□□□ -0.04
CCDC42-203ENST00000581598 BLNKQ8WV28 456 aa14.81□□□□□ -0.04
CCDC42-203ENST00000581598 A0A1W2PRE2 83 aa14.8□□□□□ -0.04
CCDC42-203ENST00000581598 ZNF705GA8MUZ8 300 aaPredicted RBP14.8□□□□□ -0.04
CCDC42-203ENST00000581598 LYPD1Q8N2G4 141 aa14.8□□□□□ -0.04
CCDC42-203ENST00000581598 MANBALQ9NQG1 85 aa14.8□□□□□ -0.04
CCDC42-203ENST00000581598 FAM74A7A6NL05 159 aa14.79□□□□□ -0.04
CCDC42-203ENST00000581598 RPUSD4Q96CM3 377 aaKnown RBP14.79□□□□□ -0.04
CCDC42-203ENST00000581598 GNG13Q9P2W3 67 aa14.79□□□□□ -0.04
CCDC42-203ENST00000581598 TRAV12-2A0A075B6T6 113 aa14.78□□□□□ -0.04
CCDC42-203ENST00000581598 PLAC8L1A1L4L8 177 aa14.78□□□□□ -0.04
CCDC42-203ENST00000581598 HTN3P15516 51 aa14.78□□□□□ -0.04
CCDC42-203ENST00000581598 TAS2R60P59551 318 aa14.78□□□□□ -0.04
CCDC42-203ENST00000581598 Q9H3A6 140 aa14.78□□□□□ -0.04
CCDC42-203ENST00000581598 OTORQ9NRC9 128 aa14.78□□□□□ -0.04
CCDC42-203ENST00000581598 PPP1R14DQ9NXH3 145 aa14.78□□□□□ -0.04
CCDC42-203ENST00000581598 GGTLC3B5MD39 225 aa14.77□□□□□ -0.05
CCDC42-203ENST00000581598 PAGE4O60829 102 aa14.77□□□□□ -0.05
CCDC42-203ENST00000581598 IFNA1P01562 189 aa14.77□□□□□ -0.05
CCDC42-203ENST00000581598 PRM2P04554 102 aa14.77□□□□□ -0.05
CCDC42-203ENST00000581598 BCL2P10415 239 aa14.77□□□□□ -0.05
CCDC42-203ENST00000581598 TAGLN2P37802 199 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms