RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 PRELID1Q9Y255 219 aa7.28□□□□□ -1.24
RFFL-209ENST00000581265 LSM5Q9Y4Y9 91 aaKnown RBP7.28□□□□□ -1.24
RFFL-209ENST00000581265 APOBP04114 4563 aaKnown RBP7.28□□□□□ -1.24
RFFL-209ENST00000581265 CCSO14618 274 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 SIVA1O15304 175 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 PLA2G10O15496 165 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 SPINK4O60575 86 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 HIST1H1EP10412 219 aaKnown RBP7.27□□□□□ -1.25
RFFL-209ENST00000581265 CRISP2P16562 243 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 S100A11P31949 105 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 LINC00315P59091 139 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 CD300CQ08708 224 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 ERCC8Q13216 396 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 IL15RAQ13261 267 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 PDE6HQ13956 83 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 C9orf47Q6ZRZ4 202 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 EIF4E3Q8N5X7 224 aaKnown RBP7.27□□□□□ -1.25
RFFL-209ENST00000581265 FRZBQ92765 325 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 C2orf50Q96LR7 162 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 PGPEP1Q9NXJ5 209 aa7.27□□□□□ -1.25
RFFL-209ENST00000581265 TRGV1A0A0A0MS02 117 aa7.26□□□□□ -1.25
RFFL-209ENST00000581265 C5orf51A6NDU8 294 aa7.26□□□□□ -1.25
RFFL-209ENST00000581265 FAM25EA8MYX2 175 aa7.26□□□□□ -1.25
RFFL-209ENST00000581265 MPDU1O75352 247 aa7.26□□□□□ -1.25
RFFL-209ENST00000581265 TCRBP04435 133 aa7.26□□□□□ -1.25
RFFL-209ENST00000581265 PVALBP20472 110 aaPredicted RBP7.26□□□□□ -1.25
RFFL-209ENST00000581265 RNASE4P34096 147 aaKnown RBP7.26□□□□□ -1.25
RFFL-209ENST00000581265 SULT1A1P50225 295 aa7.26□□□□□ -1.25
RFFL-209ENST00000581265 TCL1AP56279 114 aa7.26□□□□□ -1.25
RFFL-209ENST00000581265 ATP6V1FQ16864 119 aa7.26□□□□□ -1.25
RFFL-209ENST00000581265 IBA57Q5T440 356 aaKnown RBP7.26□□□□□ -1.25
RFFL-209ENST00000581265 TMEM252Q8N6L7 170 aa7.26□□□□□ -1.25
RFFL-209ENST00000581265 LYRM2Q9NU23 88 aaPredicted RBP7.26□□□□□ -1.25
RFFL-209ENST00000581265 KLF12Q9Y4X4 402 aa7.26□□□□□ -1.25
RFFL-209ENST00000581265 TIMM9Q9Y5J7 89 aa7.26□□□□□ -1.25
RFFL-209ENST00000581265 PAX4O43316 350 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 LYRM1O43325 122 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 GPX1P07203 203 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 HBG1P69891 147 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 HBG2P69892 147 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 BAXQ07812 192 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 SLAQ13239 276 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 BTN1A1Q13410 526 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 EXOC3-AS1Q8N2X6 119 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 ZFAND2AQ8N6M9 145 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 ST6GAL2Q96JF0 529 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 AAMDCQ9H7C9 122 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 PRO0255Q9UI72 69 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 ICOSQ9Y6W8 199 aa7.25□□□□□ -1.25
RFFL-209ENST00000581265 TRAV6A0A075B6T7 132 aa7.24□□□□□ -1.25
RFFL-209ENST00000581265 UBE2L5PA0A1B0GUS4 154 aa7.24□□□□□ -1.25
RFFL-209ENST00000581265 IGSF23A1L1A6 192 aa7.24□□□□□ -1.25
RFFL-209ENST00000581265 NXPH4O95158 308 aa7.24□□□□□ -1.25
RFFL-209ENST00000581265 PYYP10082 97 aa7.24□□□□□ -1.25
RFFL-209ENST00000581265 STX12Q86Y82 276 aa7.24□□□□□ -1.25
RFFL-209ENST00000581265 SEC22CQ9BRL7 303 aa7.24□□□□□ -1.25
RFFL-209ENST00000581265 ZNF492Q9P255 531 aa7.24□□□□□ -1.25
RFFL-209ENST00000581265 HHLA3Q9XRX5 114 aa7.24□□□□□ -1.25
RFFL-209ENST00000581265 IGHV1OR15-1A0A075B7D0 117 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 TRBV7-9A0A0J9YWB2 115 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 RGS13O14921 159 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 EREGO14944 169 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 NBEAP1P0C6P0 100 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 FGF7P21781 194 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 CRYBA4P53673 196 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 RAB32Q13637 225 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 FHL2Q14192 279 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 ICAM4Q14773 271 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 MRPL23Q16540 153 aaKnown RBP7.23□□□□□ -1.25
RFFL-209ENST00000581265 GCSAMLQ5JQS6 135 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 TMEM78Q5T7P6 136 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 Q5VSD8 79 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 CDPF1Q6NVV7 123 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 LYPD5Q6UWN5 251 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 BLNKQ8WV28 456 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 FAM167A-AS1Q96KT0 104 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 VGLL1Q99990 258 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 SLC25A2Q9BXI2 301 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 NUDT15Q9NV35 164 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 PTTG2Q9NZH5 202 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 TP53TG3Q9ULZ0 132 aa7.23□□□□□ -1.25
RFFL-209ENST00000581265 IGKV2-40A0A087WW87 121 aaPredicted RBP7.22□□□□□ -1.25
RFFL-209ENST00000581265 K7EP13 123 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 PRAF2O60831 178 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 IGKV2D-40P01614 121 aaPredicted RBP7.22□□□□□ -1.25
RFFL-209ENST00000581265 XGP55808 180 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 S100A10P60903 97 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 PRR9Q5T870 116 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 Q6ZQT7 251 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 NEGR1Q7Z3B1 354 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 NFE4Q86UQ8 179 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 IQCF2Q8IXL9 164 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 LYPD1Q8N2G4 141 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 NPCDR1Q9BY65 106 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 MRPL32Q9BYC8 188 aaKnown RBP7.22□□□□□ -1.25
RFFL-209ENST00000581265 MRPL16Q9NX20 251 aaKnown RBP7.22□□□□□ -1.25
RFFL-209ENST00000581265 TNFRSF18Q9Y5U5 241 aa7.22□□□□□ -1.25
RFFL-209ENST00000581265 TRAV9-2A0A087WT02 112 aa7.21□□□□□ -1.26
RFFL-209ENST00000581265 IGHV3-53P01767 116 aa7.21□□□□□ -1.26
RFFL-209ENST00000581265 H2AFB2P0C5Z0 115 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms