RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 FAM231DQ6ZW35 169 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 GBGT1Q8N5D6 347 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 NUDT10Q8NFP7 164 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 NUDT11Q96G61 164 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 ZC2HC1AQ96GY0 325 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 RAX2Q96IS3 184 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 FAM210BQ96KR6 192 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 C8orf49Q96NF6 230 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 IMMP2LQ96T52 175 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 BIN3Q9NQY0 253 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 CLEC5AQ9NY25 188 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 IL36BQ9NZH7 164 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 ZFP30Q9Y2G7 519 aa7.95□□□□□ -1.14
SS18-217ENST00000580958 TSSC4Q9Y5U2 329 aaPredicted RBP7.95□□□□□ -1.14
SS18-217ENST00000580958 SORL1Q92673 2214 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 TRBV24-1A0A075B6N3 115 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 A0A1W2PPQ1 181 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 RBAKDNA6NC62 111 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 FBLL1A6NHQ2 334 aaKnown RBP7.94□□□□□ -1.14
SS18-217ENST00000580958 CYSRT1A8MQ03 144 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 M0QZ24 198 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 CBLN1P23435 193 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 RPS10P46783 165 aaKnown RBP7.94□□□□□ -1.14
SS18-217ENST00000580958 ADAMTSL5Q6ZMM2 481 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 WFDC3Q8IUB2 231 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 ZNF738Q8NE65 137 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 Q8TAT8 98 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 DLX4Q92988 240 aaPredicted RBP7.94□□□□□ -1.14
SS18-217ENST00000580958 PYGO2Q9BRQ0 406 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 PEMTQ9UBM1 199 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 MLXQ9UH92 298 aa7.94□□□□□ -1.14
SS18-217ENST00000580958 AGRNO00468 2067 aa7.93□□□□□ -1.14
SS18-217ENST00000580958 C19orf71A6NCJ1 209 aa7.93□□□□□ -1.14
SS18-217ENST00000580958 CCL24O00175 119 aa7.93□□□□□ -1.14
SS18-217ENST00000580958 CA1P00915 261 aaPredicted RBP7.93□□□□□ -1.14
SS18-217ENST00000580958 TFPI2P48307 235 aa7.93□□□□□ -1.14
SS18-217ENST00000580958 TNP2Q05952 138 aa7.93□□□□□ -1.14
SS18-217ENST00000580958 FOXL1Q12952 345 aa7.93□□□□□ -1.14
SS18-217ENST00000580958 OR9G4Q8NGQ1 327 aa7.93□□□□□ -1.14
SS18-217ENST00000580958 PRR25Q96S07 402 aa7.93□□□□□ -1.14
SS18-217ENST00000580958 MS4A6AQ9H2W1 248 aa7.93□□□□□ -1.14
SS18-217ENST00000580958 OVOL1O14753 267 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 P01737 135 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 CSN3P07498 182 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 ID1P41134 155 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 TCL1AP56279 114 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 DEFB1P60022 68 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 KRTAP10-3P60369 221 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 FHL3Q13643 280 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 NSUN5P1Q3KNT7 163 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 SAPCD1Q5SSQ6 148 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 DAZAP1Q96EP5 407 aaKnown RBP7.92□□□□□ -1.14
SS18-217ENST00000580958 NDFIP1Q9BT67 221 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 GPR61Q9BZJ8 451 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 AGPAT4-IT1Q9H0P7 198 aa7.92□□□□□ -1.14
SS18-217ENST00000580958 RPP21Q9H633 154 aaKnown RBP7.92□□□□□ -1.14
SS18-217ENST00000580958 TRAV9-1A0A075B6T8 112 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 SMIM27A0A1W2PRY6 76 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 ADARB2-AS1A8MUL3 147 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 C1orf196B1AJZ1 125 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 K7EQG2 157 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 ZNF705DP0CH99 300 aaPredicted RBP7.91□□□□□ -1.14
SS18-217ENST00000580958 ZNF705BP0CI00 300 aaPredicted RBP7.91□□□□□ -1.14
SS18-217ENST00000580958 CT45A10P0DMU9 189 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 CRIP1P50238 77 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 XP32Q5T750 250 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 TMEM78Q5T7P6 136 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 SAMD13Q5VXD3 122 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 C9orf47Q6ZRZ4 202 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 DCANP1Q8TF63 244 aa7.91□□□□□ -1.14
SS18-217ENST00000580958 SH2D1AO60880 128 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 TYMSP04818 313 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 ZNF80P51504 273 aaPredicted RBP7.9□□□□□ -1.14
SS18-217ENST00000580958 ZNF138P52744 262 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 RAB5BP61020 215 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 SMUG1Q53HV7 270 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 COX8CQ7Z4L0 72 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 ZFP82Q8N141 532 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.9□□□□□ -1.14
SS18-217ENST00000580958 OR4B1Q8NGF8 309 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 OR8A1Q8NGG7 326 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 OR10J6PQ8NGY7 276 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 DYNLRB2Q8TF09 96 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 BTF3L4Q96K17 158 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 SRD5A3Q9H8P0 318 aa7.9□□□□□ -1.14
SS18-217ENST00000580958 IZUMO1RA6ND01 250 aa7.89□□□□□ -1.15
SS18-217ENST00000580958 NPIPB6E9PJ23 425 aa7.89□□□□□ -1.15
SS18-217ENST00000580958 F6UB75 175 aa7.89□□□□□ -1.15
SS18-217ENST00000580958 SPINK4O60575 86 aa7.89□□□□□ -1.15
SS18-217ENST00000580958 ZNF688P0C7X2 276 aa7.89□□□□□ -1.15
SS18-217ENST00000580958 RPL19P84098 196 aaKnown RBP7.89□□□□□ -1.15
SS18-217ENST00000580958 HIST1H1AQ02539 215 aaPredicted RBP7.89□□□□□ -1.15
SS18-217ENST00000580958 CT83Q5H943 113 aa7.89□□□□□ -1.15
SS18-217ENST00000580958 FAM162BQ5T6X4 162 aa7.89□□□□□ -1.15
SS18-217ENST00000580958 SAMD5Q5TGI4 173 aa7.89□□□□□ -1.15
SS18-217ENST00000580958 OR2D3Q8NGH3 330 aa7.89□□□□□ -1.15
SS18-217ENST00000580958 TSKUQ8WUA8 353 aa7.89□□□□□ -1.15
SS18-217ENST00000580958 A0A1B0GUS0 222 aa7.88□□□□□ -1.15
SS18-217ENST00000580958 A8MWL6 223 aa7.88□□□□□ -1.15
SS18-217ENST00000580958 TRGC2P03986 189 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms