RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 FN1P02751 2386 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 IGF1P05019 195 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 PPIFP30405 207 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 MYCNOSP40205 109 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 CAMPP49913 170 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 MFAP4P55083 255 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 C19orf54Q5BKX5 351 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 OR10J3Q5JRS4 329 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 GDF5OSQ5U4N7 250 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 C5orf17Q8NAS9 161 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 CHRDL1Q9BU40 450 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 NSD1Q96L73 2696 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 CCL25O15444 150 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 RPL19P84098 196 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 NIT1Q86X76 327 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 ZNF491Q8N8L2 437 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 THYN1Q9P016 225 aa9.82□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TEP1Q99973 2627 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 F8P00451 2351 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 C20orf202A1L168 122 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 FAM181BA6NEQ2 426 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 BMPR1BO00238 502 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TOMM40O96008 361 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 IGHV3-11P01762 117 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 MT-ND6P03923 174 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 C3orf79P0CE67 100 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 GPR183P32249 361 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 BPIFA4PQ86YQ2 179 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 NUDT10Q8NFP7 164 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 OR4F17Q8NGA8 305 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 NUDT11Q96G61 164 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 C17orf77Q96MU5 243 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 MRPL27Q9P0M9 148 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 ZNF324O75467 553 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TRGV3P03979 118 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TCRAP04437 139 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 HIST1H1EP10412 219 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 CLEC19AQ6UXS0 136 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 Q6ZVH6 145 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 ORAOV1Q8WV07 137 aa9.81□□□□□ -0.84
CDK5RAP3-217ENST00000580287 DNAJC9-AS1A6NH13 148 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 GOLT1AQ6ZVE7 132 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TCF24Q7RTU0 167 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 SHANK2-AS3Q9BTD1 123 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 CTSGP08311 255 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 RBX1P62877 108 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 ATOH7Q8N100 152 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 CCDC140Q96MF4 163 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 GPR82Q96P67 336 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 VCX2Q9H322 139 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 ZNF702PQ9H963 129 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 JMJD1CQ15652 2540 aa9.8□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TRAV30A0A087WSZ9 112 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 INAFM1C9JVW0 142 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 NTF3P20783 257 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 NUP35Q8NFH5 326 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 SMIM27A0A1W2PRY6 76 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 HIGD1CA8MV81 97 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 H3BRN7 92 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 M0QZ24 198 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 PRNTQ86SH4 94 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TSKUQ8WUA8 353 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 ZNF479Q96JC4 524 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 OTORQ9NRC9 128 aa9.79□□□□□ -0.84
CDK5RAP3-217ENST00000580287 HINT1P49773 126 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-217ENST00000580287 ZNF502Q8TBZ5 544 aa9.78□□□□□ -0.84
CDK5RAP3-217ENST00000580287 FMC1Q96HJ9 113 aa9.78□□□□□ -0.84
CDK5RAP3-217ENST00000580287 ZNF331Q9NQX6 463 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TMEM14CQ9P0S9 112 aa9.78□□□□□ -0.84
CDK5RAP3-217ENST00000580287 SRD5A1P18405 259 aa9.78□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TSPOP30536 169 aa9.78□□□□□ -0.84
CDK5RAP3-217ENST00000580287 CRIP2P52943 208 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-217ENST00000580287 LCN12Q6JVE5 192 aa9.78□□□□□ -0.84
CDK5RAP3-217ENST00000580287 DAZAP1Q96EP5 407 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-217ENST00000580287 PRSS22Q9GZN4 317 aa9.78□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TRBV19A0A075B6N1 114 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 SAP30O75446 220 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 ATP5G2Q06055 141 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 KLHDC1Q8N7A1 406 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 OR2D3Q8NGH3 330 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 GLMPQ8WWB7 406 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 ZNF414Q96IQ9 312 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 NPFFR1Q9GZQ6 430 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 IZUMO1RA6ND01 250 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 CFHR3Q02985 330 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 COX19Q49B96 90 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 GRAMD2BQ96HH9 432 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 KLF12Q9Y4X4 402 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 COX11Q9Y6N1 276 aa9.77□□□□□ -0.85
CDK5RAP3-217ENST00000580287 WI2-2373I1.2A0A1W2PRP0 233 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 SCGB2A1O75556 95 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 P01737 135 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 HLA-DQA1P01909 254 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 APCSP02743 223 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 RAB9AP51151 201 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 FOXA3P55318 350 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 UBE2V1Q13404 147 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 FAM231DQ6ZW35 169 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms