RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 IFNA7P01567 189 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 CT45A10P0DMU9 189 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 LEPP41159 167 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 CDKN1BP46527 198 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 SPINK13Q1W4C9 94 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 CST9LP1Q5W188 147 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 GOLT1AQ6ZVE7 132 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 CSNK1G2-AS1Q8NCQ2 148 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 RARRES2Q99969 163 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 ARL2-SNX15V9GYD0 113 aa11.35□□□□□ -0.59
SLC6A4-205ENST00000579221 GGTLC3B5MD39 225 aa11.34□□□□□ -0.59
SLC6A4-205ENST00000579221 PAGE4O60829 102 aa11.34□□□□□ -0.59
SLC6A4-205ENST00000579221 ZNF138P52744 262 aa11.34□□□□□ -0.59
SLC6A4-205ENST00000579221 GNG5P63218 68 aa11.34□□□□□ -0.59
SLC6A4-205ENST00000579221 OR11H2Q8NH07 326 aa11.34□□□□□ -0.59
SLC6A4-205ENST00000579221 IGF2BP2-AS1Q96M15 143 aa11.34□□□□□ -0.59
SLC6A4-205ENST00000579221 ZNF492Q9P255 531 aa11.34□□□□□ -0.59
SLC6A4-205ENST00000579221 F6UZH7 168 aa11.33□□□□□ -0.6
SLC6A4-205ENST00000579221 TCRAP04437 139 aa11.33□□□□□ -0.6
SLC6A4-205ENST00000579221 CCL20P78556 96 aa11.33□□□□□ -0.6
SLC6A4-205ENST00000579221 TEX261Q6UWH6 196 aa11.33□□□□□ -0.6
SLC6A4-205ENST00000579221 MANBALQ9NQG1 85 aa11.33□□□□□ -0.6
SLC6A4-205ENST00000579221 GNG13Q9P2W3 67 aa11.33□□□□□ -0.6
SLC6A4-205ENST00000579221 GOLT1BQ9Y3E0 138 aa11.33□□□□□ -0.6
SLC6A4-205ENST00000579221 AGRNO00468 2067 aa11.32□□□□□ -0.6
SLC6A4-205ENST00000579221 TRBV7-9A0A0J9YWB2 115 aa11.32□□□□□ -0.6
SLC6A4-205ENST00000579221 INSP01308 110 aa11.32□□□□□ -0.6
SLC6A4-205ENST00000579221 HIST1H2BAQ96A08 127 aa11.32□□□□□ -0.6
SLC6A4-205ENST00000579221 FAM19A4Q96LR4 140 aa11.32□□□□□ -0.6
SLC6A4-205ENST00000579221 TCEAL7Q9BRU2 100 aa11.32□□□□□ -0.6
SLC6A4-205ENST00000579221 ATG101Q9BSB4 218 aa11.32□□□□□ -0.6
SLC6A4-205ENST00000579221 LENEPQ9Y5L5 61 aa11.32□□□□□ -0.6
SLC6A4-205ENST00000579221 TRAV12-2A0A075B6T6 113 aa11.31□□□□□ -0.6
SLC6A4-205ENST00000579221 FBLL1A6NHQ2 334 aaKnown RBP11.31□□□□□ -0.6
SLC6A4-205ENST00000579221 CRXO43186 299 aaPredicted RBP11.31□□□□□ -0.6
SLC6A4-205ENST00000579221 IFNA1P01562 189 aa11.31□□□□□ -0.6
SLC6A4-205ENST00000579221 NMBP08949 121 aa11.31□□□□□ -0.6
SLC6A4-205ENST00000579221 PMS2P11Q13670 270 aa11.31□□□□□ -0.6
SLC6A4-205ENST00000579221 CCDC28AQ8IWP9 274 aa11.31□□□□□ -0.6
SLC6A4-205ENST00000579221 CYB561D1Q8N8Q1 229 aa11.31□□□□□ -0.6
SLC6A4-205ENST00000579221 C20orf144Q9BQM9 153 aa11.31□□□□□ -0.6
SLC6A4-205ENST00000579221 TMEM208Q9BTX3 173 aa11.31□□□□□ -0.6
SLC6A4-205ENST00000579221 IGHV3OR16-12A0A075B7B8 117 aa11.3□□□□□ -0.6
SLC6A4-205ENST00000579221 SMIM9A6NGZ8 99 aa11.3□□□□□ -0.6
SLC6A4-205ENST00000579221 J3KRW8 73 aa11.3□□□□□ -0.6
SLC6A4-205ENST00000579221 GPX1P07203 203 aa11.3□□□□□ -0.6
SLC6A4-205ENST00000579221 CRISP2P16562 243 aa11.3□□□□□ -0.6
SLC6A4-205ENST00000579221 ATP5G3P48201 142 aa11.3□□□□□ -0.6
SLC6A4-205ENST00000579221 LCE2DQ5TA82 110 aaPredicted RBP11.3□□□□□ -0.6
SLC6A4-205ENST00000579221 ZNF705AQ6ZN79 300 aaPredicted RBP11.3□□□□□ -0.6
SLC6A4-205ENST00000579221 C1orf158Q8N1D5 194 aa11.3□□□□□ -0.6
SLC6A4-205ENST00000579221 ZNF680Q8NEM1 530 aa11.3□□□□□ -0.6
SLC6A4-205ENST00000579221 TXNDC17Q9BRA2 123 aa11.3□□□□□ -0.6
SLC6A4-205ENST00000579221 C11orf94C9JXX5 98 aa11.29□□□□□ -0.6
SLC6A4-205ENST00000579221 PEX7O00628 323 aa11.29□□□□□ -0.6
SLC6A4-205ENST00000579221 MIFP14174 115 aa11.29□□□□□ -0.6
SLC6A4-205ENST00000579221 TAGLN2P37802 199 aaKnown RBP11.29□□□□□ -0.6
SLC6A4-205ENST00000579221 TMEM256Q8N2U0 113 aa11.29□□□□□ -0.6
SLC6A4-205ENST00000579221 TMEM75Q8N9X5 138 aa11.29□□□□□ -0.6
SLC6A4-205ENST00000579221 Q8TAT8 98 aa11.29□□□□□ -0.6
SLC6A4-205ENST00000579221 LINC01587Q99440 93 aa11.29□□□□□ -0.6
SLC6A4-205ENST00000579221 NEU1Q99519 415 aa11.29□□□□□ -0.6
SLC6A4-205ENST00000579221 PSG8Q9UQ74 426 aa11.29□□□□□ -0.6
SLC6A4-205ENST00000579221 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
SLC6A4-205ENST00000579221 C7orf71A4D174 169 aa11.28□□□□□ -0.6
SLC6A4-205ENST00000579221 KLLNB2CW77 178 aa11.28□□□□□ -0.6
SLC6A4-205ENST00000579221 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
SLC6A4-205ENST00000579221 KIR3DS1Q14943 382 aa11.28□□□□□ -0.6
SLC6A4-205ENST00000579221 GFI1BQ5VTD9 330 aa11.28□□□□□ -0.6
SLC6A4-205ENST00000579221 LYPD6BQ8NI32 183 aa11.28□□□□□ -0.6
SLC6A4-205ENST00000579221 SGK494Q96LW2 274 aa11.28□□□□□ -0.6
SLC6A4-205ENST00000579221 NIPSNAP3BQ9BS92 247 aa11.28□□□□□ -0.6
SLC6A4-205ENST00000579221 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
SLC6A4-205ENST00000579221 X6R8D5 127 aa11.28□□□□□ -0.6
SLC6A4-205ENST00000579221 TRAV12-3A0A0B4J271 114 aa11.27□□□□□ -0.61
SLC6A4-205ENST00000579221 FLI1Q01543 452 aaPredicted RBP11.27□□□□□ -0.61
SLC6A4-205ENST00000579221 SAPCD1Q5SSQ6 148 aa11.27□□□□□ -0.61
SLC6A4-205ENST00000579221 PRNTQ86SH4 94 aa11.27□□□□□ -0.61
SLC6A4-205ENST00000579221 ZFAND2AQ8N6M9 145 aa11.27□□□□□ -0.61
SLC6A4-205ENST00000579221 LINC00479Q96M42 142 aa11.27□□□□□ -0.61
SLC6A4-205ENST00000579221 TREM1Q9NP99 234 aa11.27□□□□□ -0.61
SLC6A4-205ENST00000579221 VAX2Q9UIW0 290 aa11.27□□□□□ -0.61
SLC6A4-205ENST00000579221 TRAV34A0A0B4J273 112 aa11.26□□□□□ -0.61
SLC6A4-205ENST00000579221 H7BYZ3 331 aa11.26□□□□□ -0.61
SLC6A4-205ENST00000579221 IGLV2-11P01706 119 aa11.26□□□□□ -0.61
SLC6A4-205ENST00000579221 S100A9P06702 114 aaKnown RBP11.26□□□□□ -0.61
SLC6A4-205ENST00000579221 UBE2G1P62253 170 aa11.26□□□□□ -0.61
SLC6A4-205ENST00000579221 RRN3P1Q2M238 152 aa11.26□□□□□ -0.61
SLC6A4-205ENST00000579221 FMC1Q96HJ9 113 aa11.26□□□□□ -0.61
SLC6A4-205ENST00000579221 PRKDCP78527 4128 aaKnown RBP11.25□□□□□ -0.61
SLC6A4-205ENST00000579221 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
SLC6A4-205ENST00000579221 A0A0J9YWU9 116 aa11.25□□□□□ -0.61
SLC6A4-205ENST00000579221 ZNF324O75467 553 aaPredicted RBP11.25□□□□□ -0.61
SLC6A4-205ENST00000579221 RBMY1A1P0DJD3 496 aaKnown RBP11.25□□□□□ -0.61
SLC6A4-205ENST00000579221 RBMY1CP0DJD4 496 aa11.25□□□□□ -0.61
SLC6A4-205ENST00000579221 BCL2P10415 239 aa11.25□□□□□ -0.61
SLC6A4-205ENST00000579221 AKR1C3P42330 323 aa11.25□□□□□ -0.61
SLC6A4-205ENST00000579221 TAS2R60P59551 318 aa11.25□□□□□ -0.61
SLC6A4-205ENST00000579221 BTN1A1Q13410 526 aa11.25□□□□□ -0.61
SLC6A4-205ENST00000579221 RBMY1FQ15415 496 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms