RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 IGHV1-69DA0A0B4J2H0 117 aa13.53□□□□□ -0.24
ERBB2-205ENST00000578199 LOC389332A0A1B0GUA5 103 aa13.53□□□□□ -0.24
ERBB2-205ENST00000578199 IGHV1-69P01742 117 aa13.53□□□□□ -0.24
ERBB2-205ENST00000578199 IGLL1P15814 213 aa13.53□□□□□ -0.24
ERBB2-205ENST00000578199 TMEM190Q8WZ59 177 aa13.53□□□□□ -0.24
ERBB2-205ENST00000578199 CACNA1AO00555 2505 aa13.53□□□□□ -0.24
ERBB2-205ENST00000578199 D6R8Y8 96 aa13.52□□□□□ -0.24
ERBB2-205ENST00000578199 SYS1-DBNDD2H3BUS1 97 aa13.52□□□□□ -0.24
ERBB2-205ENST00000578199 ORM1P02763 201 aa13.52□□□□□ -0.24
ERBB2-205ENST00000578199 PIMREGQ9BSJ6 248 aa13.52□□□□□ -0.24
ERBB2-205ENST00000578199 UQCR10Q9UDW1 63 aa13.52□□□□□ -0.24
ERBB2-205ENST00000578199 IGHV4-30-2A0A087WSY4 118 aa13.52□□□□□ -0.25
ERBB2-205ENST00000578199 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
ERBB2-205ENST00000578199 ATP5G2Q06055 141 aa13.52□□□□□ -0.25
ERBB2-205ENST00000578199 Q6AWC8 147 aa13.52□□□□□ -0.25
ERBB2-205ENST00000578199 IL17RELQ6ZVW7 336 aa13.52□□□□□ -0.25
ERBB2-205ENST00000578199 PMCHL2Q9BQD1 86 aa13.52□□□□□ -0.25
ERBB2-205ENST00000578199 MSRB1Q9NZV6 116 aa13.52□□□□□ -0.25
ERBB2-205ENST00000578199 TRAV9-2A0A087WT02 112 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 OR4C46A6NHA9 309 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 PPIFP30405 207 aaKnown RBP13.51□□□□□ -0.25
ERBB2-205ENST00000578199 IFI27P40305 119 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-205ENST00000578199 TFPI2P48307 235 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 RNASE8Q8TDE3 154 aaKnown RBP13.51□□□□□ -0.25
ERBB2-205ENST00000578199 NRGNQ92686 78 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 MOB4Q9Y3A3 225 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 SMKR1H3BMG3 65 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 TRBV12-3P01733 135 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 FXYD7P58549 80 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 LOXL1Q08397 574 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-205ENST00000578199 TWIST1Q15672 202 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 KLK9Q2XQG4 91 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 GATD1Q8NB37 220 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 PRSS3P2Q8NHM4 247 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 C10orf105Q8TEF2 133 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 KLK9Q9UKQ9 250 aa13.51□□□□□ -0.25
ERBB2-205ENST00000578199 ZNF493Q6ZR52 646 aa13.5□□□□□ -0.25
ERBB2-205ENST00000578199 COX8CQ7Z4L0 72 aa13.5□□□□□ -0.25
ERBB2-205ENST00000578199 TRBV7-1A0A0A6YYK4 115 aa13.5□□□□□ -0.25
ERBB2-205ENST00000578199 hDV102S1A0JD36 115 aa13.5□□□□□ -0.25
ERBB2-205ENST00000578199 TRGV3P03979 118 aa13.5□□□□□ -0.25
ERBB2-205ENST00000578199 ATP5J2P56134 94 aa13.5□□□□□ -0.25
ERBB2-205ENST00000578199 TRAV8-2A0A0B4J237 113 aa13.49□□□□□ -0.25
ERBB2-205ENST00000578199 A0A1B0GW15 77 aa13.49□□□□□ -0.25
ERBB2-205ENST00000578199 HNRNPA3P51991 378 aaKnown RBP13.49□□□□□ -0.25
ERBB2-205ENST00000578199 FAM104BQ5XKR9 115 aa13.49□□□□□ -0.25
ERBB2-205ENST00000578199 Q6ZQT7 251 aa13.49□□□□□ -0.25
ERBB2-205ENST00000578199 KLHDC1Q8N7A1 406 aa13.49□□□□□ -0.25
ERBB2-205ENST00000578199 FER1L6-AS1Q8NA97 138 aa13.49□□□□□ -0.25
ERBB2-205ENST00000578199 METTL26Q96S19 204 aa13.49□□□□□ -0.25
ERBB2-205ENST00000578199 AP5S1Q9NUS5 200 aa13.49□□□□□ -0.25
ERBB2-205ENST00000578199 CRXO43186 299 aaPredicted RBP13.49□□□□□ -0.25
ERBB2-205ENST00000578199 BMI1P35226 326 aa13.49□□□□□ -0.25
ERBB2-205ENST00000578199 Q6ZS46 218 aa13.49□□□□□ -0.25
ERBB2-205ENST00000578199 SELENOKQ9Y6D0 94 aa13.49□□□□□ -0.25
ERBB2-205ENST00000578199 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.48□□□□□ -0.254e-7■■■■□ 19.8
ERBB2-205ENST00000578199 A0A087X0K7 114 aa13.48□□□□□ -0.25
ERBB2-205ENST00000578199 MRPL51Q4U2R6 128 aaKnown RBP13.48□□□□□ -0.25
ERBB2-205ENST00000578199 LCNL1Q6ZST4 164 aa13.48□□□□□ -0.25
ERBB2-205ENST00000578199 AGPAT4-IT1Q9H0P7 198 aa13.48□□□□□ -0.25
ERBB2-205ENST00000578199 MYO18BQ8IUG5 2567 aa13.48□□□□□ -0.25
ERBB2-205ENST00000578199 H3BUX3 64 aa13.48□□□□□ -0.25
ERBB2-205ENST00000578199 OR5AL1P0C617 328 aa13.48□□□□□ -0.25
ERBB2-205ENST00000578199 C8orf86Q6ZUL3 223 aa13.48□□□□□ -0.25
ERBB2-205ENST00000578199 CENPEQ02224 2701 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 FABP5P3A8MUU1 101 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 NCR2O95944 276 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 S100A7P31151 101 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 BLCAPP62952 87 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 C19orf54Q5BKX5 351 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 UNQ9165/PRO28630Q6UXU0 137 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 FA2HQ7L5A8 372 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 PRELID3AQ96N28 172 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 SIGLEC8Q9NYZ4 499 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 DOPEY1Q5JWR5 2465 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 IGHV3-11P01762 117 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 IGLC6P0CF74 106 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 TSPOP30536 169 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 CLEC2AQ6UVW9 174 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 MAP1LC3CQ9BXW4 147 aa13.47□□□□□ -0.25
ERBB2-205ENST00000578199 ACACBO00763 2458 aa13.46□□□□□ -0.25
ERBB2-205ENST00000578199 GAS8-AS1O95177 125 aa13.46□□□□□ -0.25
ERBB2-205ENST00000578199 RAB9AP51151 201 aa13.46□□□□□ -0.25
ERBB2-205ENST00000578199 COL5A1-AS1Q5SY13 56 aa13.46□□□□□ -0.25
ERBB2-205ENST00000578199 PSMG3-AS1Q96PY0 264 aa13.46□□□□□ -0.25
ERBB2-205ENST00000578199 C11orf21Q9P2W6 132 aa13.46□□□□□ -0.25
ERBB2-205ENST00000578199 ARL3P36405 182 aa13.46□□□□□ -0.26
ERBB2-205ENST00000578199 STPG4Q8N801 248 aa13.46□□□□□ -0.26
ERBB2-205ENST00000578199 MEGF9Q9H1U4 602 aa13.46□□□□□ -0.26
ERBB2-205ENST00000578199 KLK15Q9H2R5 256 aa13.46□□□□□ -0.26
ERBB2-205ENST00000578199 LAMTOR2Q9Y2Q5 125 aa13.46□□□□□ -0.26
ERBB2-205ENST00000578199 ZANQ9Y493 2812 aa13.45□□□□□ -0.26
ERBB2-205ENST00000578199 AVPP01185 164 aa13.45□□□□□ -0.26
ERBB2-205ENST00000578199 SLC50A1Q9BRV3 221 aa13.45□□□□□ -0.26
ERBB2-205ENST00000578199 SMAD7O15105 426 aaKnown RBP13.45□□□□□ -0.26
ERBB2-205ENST00000578199 CDKN1BP46527 198 aa13.45□□□□□ -0.26
ERBB2-205ENST00000578199 HINT1P49773 126 aaPredicted RBP13.45□□□□□ -0.26
ERBB2-205ENST00000578199 ORMDL3Q8N138 153 aa13.45□□□□□ -0.26
ERBB2-205ENST00000578199 CSPG4Q6UVK1 2322 aa13.45□□□□□ -0.26
ERBB2-205ENST00000578199 A0A096LNJ9 63 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms