RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 NDUFB3O43676 98 aa11.44□□□□□ -0.58
SCARF1-209ENST00000576012 IGKV1-17P01599 117 aa11.44□□□□□ -0.58
SCARF1-209ENST00000576012 TRAV26-2A0A0B4J265 109 aa11.44□□□□□ -0.58
SCARF1-209ENST00000576012 TM4SF5O14894 197 aa11.44□□□□□ -0.58
SCARF1-209ENST00000576012 EGR2P11161 476 aaPredicted RBP11.44□□□□□ -0.58
SCARF1-209ENST00000576012 C1orf162Q8NEQ5 155 aaPredicted RBP11.44□□□□□ -0.58
SCARF1-209ENST00000576012 PRSS33Q8NF86 280 aa11.44□□□□□ -0.58
SCARF1-209ENST00000576012 RAB9AP51151 201 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 SIGLEC15Q6ZMC9 328 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 SCNM1Q9BWG6 230 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 SMPXQ9UHP9 88 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 TMEM8BA6NDV4 472 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 C16orf97H3BN30 126 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 MRGPRG-AS1Q2M3A8 158 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 IGHV3-66A0A0C4DH42 116 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 A4D1N5 150 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 BRI3O95415 125 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 ZNF80P51504 273 aaPredicted RBP11.43□□□□□ -0.58
SCARF1-209ENST00000576012 TMEM158Q8WZ71 300 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 HIST1H4GQ99525 98 aa11.43□□□□□ -0.58
SCARF1-209ENST00000576012 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
SCARF1-209ENST00000576012 AAMDCQ9H7C9 122 aa11.42□□□□□ -0.58
SCARF1-209ENST00000576012 CCDC144NLQ6NUI1 221 aa11.42□□□□□ -0.58
SCARF1-209ENST00000576012 PPP1R27Q86WC6 154 aa11.42□□□□□ -0.58
SCARF1-209ENST00000576012 DPF1Q92782 380 aa11.42□□□□□ -0.58
SCARF1-209ENST00000576012 CTSZQ9UBR2 303 aa11.42□□□□□ -0.58
SCARF1-209ENST00000576012 SIGLEC9Q9Y336 463 aa11.42□□□□□ -0.58
SCARF1-209ENST00000576012 A0A1B0GWB2 263 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 WI2-2373I1.2A0A1W2PRP0 233 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 ADIPOQQ15848 244 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 C5orf64Q2M2E5 130 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 PGPEP1Q9NXJ5 209 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 ZNF562Q6V9R5 426 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 UFC1Q9Y3C8 167 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 FTH1P19P0C7X4 201 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 CKS1BP61024 79 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 ERCC8Q13216 396 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 CD300EQ496F6 205 aaPredicted RBP11.41□□□□□ -0.58
SCARF1-209ENST00000576012 RNF125Q96EQ8 232 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 C20orf78Q9BR46 151 aa11.41□□□□□ -0.58
SCARF1-209ENST00000576012 IGKCP01834 107 aa11.4□□□□□ -0.58
SCARF1-209ENST00000576012 MRPL35Q9NZE8 188 aaKnown RBP11.4□□□□□ -0.58
SCARF1-209ENST00000576012 RALYQ9UKM9 306 aaKnown RBP11.4□□□□□ -0.58
SCARF1-209ENST00000576012 IGHV3-49A0A0A0MS15 119 aa11.4□□□□□ -0.58
SCARF1-209ENST00000576012 PRRG2O14669 202 aa11.4□□□□□ -0.58
SCARF1-209ENST00000576012 CD40P25942 277 aa11.4□□□□□ -0.58
SCARF1-209ENST00000576012 EFNA4P52798 201 aa11.4□□□□□ -0.58
SCARF1-209ENST00000576012 HES1Q14469 280 aa11.4□□□□□ -0.58
SCARF1-209ENST00000576012 MAP1LC3AQ9H492 121 aa11.4□□□□□ -0.58
SCARF1-209ENST00000576012 IGLV3-9A0A075B6K5 115 aa11.4□□□□□ -0.59
SCARF1-209ENST00000576012 IGHG3P01860 377 aa11.4□□□□□ -0.59
SCARF1-209ENST00000576012 NCOR2Q9Y618 2525 aa11.39□□□□□ -0.59
SCARF1-209ENST00000576012 CHD8Q9HCK8 2581 aa11.39□□□□□ -0.59
SCARF1-209ENST00000576012 ZNF418Q8TF45 676 aaPredicted RBP11.39□□□□□ -0.59
SCARF1-209ENST00000576012 SPANXB1Q9NS25 103 aaPredicted RBP11.39□□□□□ -0.59
SCARF1-209ENST00000576012 CYSLTR1Q9Y271 337 aa11.39□□□□□ -0.59
SCARF1-209ENST00000576012 IGLL5B9A064 214 aa11.39□□□□□ -0.59
SCARF1-209ENST00000576012 HHLA3Q9XRX5 114 aa11.39□□□□□ -0.59
SCARF1-209ENST00000576012 SHANK2-AS3Q9BTD1 123 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 TEX22C9J3V5 150 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 ID1P41134 155 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 GATA4P43694 442 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 CEND1Q8N111 149 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 ZNF491Q8N8L2 437 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 LOC107984156A0A0G2JMH3 177 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 TNFRSF6BO95407 300 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 IGHV1-8P0DP01 117 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 ARL17AQ8IVW1 177 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 PTH2Q96A98 100 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 RPEQ96AT9 228 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 SPTBN4Q9H254 2564 aa11.38□□□□□ -0.59
SCARF1-209ENST00000576012 TRAV17A0A0B4J275 112 aa11.37□□□□□ -0.59
SCARF1-209ENST00000576012 LOXP28300 417 aaPredicted RBP11.37□□□□□ -0.59
SCARF1-209ENST00000576012 GAGE13Q4V321 117 aa11.37□□□□□ -0.59
SCARF1-209ENST00000576012 Q6ZQT7 251 aa11.37□□□□□ -0.59
SCARF1-209ENST00000576012 RNF182Q8N6D2 247 aa11.37□□□□□ -0.59
SCARF1-209ENST00000576012 C17orf100A8MU93 164 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 I3L2K1 104 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 J3QR89 54 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 C12orf74Q32Q52 190 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 GLMPQ8WWB7 406 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 DYNLRB1Q9NP97 96 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 SMIM17P0DL12 118 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 IGHV1-3A0A0C4DH29 117 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 SIVA1O15304 175 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 TRGV3P03979 118 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 FOXI2Q6ZQN5 318 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 SRSF8Q9BRL6 282 aaKnown RBP11.36□□□□□ -0.59
SCARF1-209ENST00000576012 LINC00574Q9H8X3 128 aa11.36□□□□□ -0.59
SCARF1-209ENST00000576012 K7EIM0 57 aa11.35□□□□□ -0.59
SCARF1-209ENST00000576012 DPM2O94777 84 aa11.35□□□□□ -0.59
SCARF1-209ENST00000576012 ZNF493Q6ZR52 646 aa11.35□□□□□ -0.59
SCARF1-209ENST00000576012 DCHS2Q6V1P9 2916 aa11.35□□□□□ -0.59
SCARF1-209ENST00000576012 INS-IGF2F8WCM5 200 aa11.35□□□□□ -0.59
SCARF1-209ENST00000576012 BSPH1Q075Z2 132 aa11.35□□□□□ -0.59
SCARF1-209ENST00000576012 PHLDA1Q8WV24 401 aaPredicted RBP11.35□□□□□ -0.59
SCARF1-209ENST00000576012 PRR25Q96S07 402 aa11.35□□□□□ -0.59
SCARF1-209ENST00000576012 FAM215AQ9Y5M1 114 aa11.35□□□□□ -0.59
SCARF1-209ENST00000576012 TMEM178BH3BS89 294 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms