RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TMEM189A5PLL7 270 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 GGTLC3B5MD39 225 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 OR7C2O60412 319 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 JTBO76095 146 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 IFNA5P01569 189 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 HBE1P02100 147 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 ARL14EPLP0DKL9 152 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 TAS2R60P59551 318 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 RHOBP62745 196 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 BTN1A1Q13410 526 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 ZNF266Q14584 549 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 RRN3P1Q2M238 152 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 KHDC3LQ587J8 217 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 LGALS9CQ6DKI2 356 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 FAM122CQ6P4D5 195 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 TMEM256Q8N2U0 113 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 LRRC20Q8TCA0 184 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 DNAH5Q8TE73 4624 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 C2CD4CQ8TF44 421 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 TVP23CQ96ET8 276 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 LINC00467Q9BRT7 94 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 ZNF492Q9P255 531 aa6.12□□□□□ -1.43
SMG6-216ENST00000575176 DEFB131BA0A096LNP1 70 aa6.11□□□□□ -1.43
SMG6-216ENST00000575176 TRBV7-9A0A0J9YWB2 115 aa6.11□□□□□ -1.43
SMG6-216ENST00000575176 RBAKDNA6NC62 111 aa6.11□□□□□ -1.43
SMG6-216ENST00000575176 DIRC3C9JPN6 131 aa6.11□□□□□ -1.43
SMG6-216ENST00000575176 HMGB3O15347 200 aaKnown RBP6.11□□□□□ -1.43
SMG6-216ENST00000575176 EMP1P54849 157 aa6.11□□□□□ -1.43
SMG6-216ENST00000575176 ZNF345Q14585 488 aa6.11□□□□□ -1.43
SMG6-216ENST00000575176 LYPD1Q8N2G4 141 aa6.11□□□□□ -1.43
SMG6-216ENST00000575176 OR10J6PQ8NGY7 276 aa6.11□□□□□ -1.43
SMG6-216ENST00000575176 TMEM263Q8WUH6 116 aaKnown RBP6.11□□□□□ -1.43
SMG6-216ENST00000575176 ST6GAL2Q96JF0 529 aa6.11□□□□□ -1.43
SMG6-216ENST00000575176 PPP1R14DQ9NXH3 145 aa6.11□□□□□ -1.43
SMG6-216ENST00000575176 KLK5Q9Y337 293 aaPredicted RBP6.11□□□□□ -1.43
SMG6-216ENST00000575176 HERC2O95714 4834 aa6.11□□□□□ -1.43
SMG6-216ENST00000575176 C7orf71A4D174 169 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 LYRM9A8MSI8 78 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 H7BYZ3 331 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 ARPC5O15511 151 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 IGLV2-11P01706 119 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 SLC25A5P05141 298 aaKnown RBP6.1□□□□□ -1.43
SMG6-216ENST00000575176 NMBP08949 121 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 SPART-AS1P0CW21 52 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 CDC34P49427 236 aaPredicted RBP6.1□□□□□ -1.43
SMG6-216ENST00000575176 TCTAP57738 103 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 SERF2P84101 59 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 ACOT6Q3I5F7 207 aaPredicted RBP6.1□□□□□ -1.43
SMG6-216ENST00000575176 PQLC2Q6ZP29 291 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 KCNRGQ8N5I3 272 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 OR10G4Q8NGN3 311 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 OR10G9Q8NGN4 311 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 OR10G7Q8NGN6 311 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 SCGB1C1Q8TD33 95 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 RAB24Q969Q5 203 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 C16orf74Q96GX8 76 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 NIPSNAP3BQ9BS92 247 aa6.1□□□□□ -1.43
SMG6-216ENST00000575176 KIAA1109Q2LD37 5005 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 TRAV8-1A0A0A6YYK1 113 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 TRAV12-3A0A0B4J271 114 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 TEX48A0A1B0GUV7 120 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 IGLL5B9A064 214 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 J3KRW8 73 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 LY6G6CO95867 125 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 GCHFRP30047 84 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 LEPP41159 167 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 TAS2R45P59539 299 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 RANP62826 216 aaKnown RBP6.09□□□□□ -1.43
SMG6-216ENST00000575176 GNG5P63218 68 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 Q6AWC8 147 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 Q6ZNX1 250 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 ARL6IP6Q8N6S5 226 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 TMED6Q8WW62 240 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 LINC00477Q96M19 166 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 OTORQ9NRC9 128 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 TP53TG3Q9ULZ0 132 aa6.09□□□□□ -1.43
SMG6-216ENST00000575176 HMSDA8MTL9 139 aa6.08□□□□□ -1.44
SMG6-216ENST00000575176 HOXA5P20719 270 aa6.08□□□□□ -1.44
SMG6-216ENST00000575176 ZNF138P52744 262 aa6.08□□□□□ -1.44
SMG6-216ENST00000575176 ANXA2RQ3ZCQ2 193 aa6.08□□□□□ -1.44
SMG6-216ENST00000575176 TMEM88Q6PEY1 159 aa6.08□□□□□ -1.44
SMG6-216ENST00000575176 ZNF493Q6ZR52 646 aa6.08□□□□□ -1.44
SMG6-216ENST00000575176 LINC01587Q99440 93 aa6.08□□□□□ -1.44
SMG6-216ENST00000575176 PYGO2Q9BRQ0 406 aa6.08□□□□□ -1.44
SMG6-216ENST00000575176 TMEM208Q9BTX3 173 aa6.08□□□□□ -1.44
SMG6-216ENST00000575176 AAMDCQ9H7C9 122 aa6.08□□□□□ -1.44
SMG6-216ENST00000575176 FHITP49789 147 aa6.07□□□□□ -1.44
SMG6-216ENST00000575176 TCL1AP56279 114 aa6.07□□□□□ -1.44
SMG6-216ENST00000575176 DAZ2Q13117 558 aaKnown RBP6.07□□□□□ -1.44
SMG6-216ENST00000575176 Q6ZTI0 123 aa6.07□□□□□ -1.44
SMG6-216ENST00000575176 INO80EQ8NBZ0 244 aaPredicted RBP6.07□□□□□ -1.44
SMG6-216ENST00000575176 GNPNAT1Q96EK6 184 aaPredicted RBP6.07□□□□□ -1.44
SMG6-216ENST00000575176 C18orf15Q96N68 181 aa6.07□□□□□ -1.44
SMG6-216ENST00000575176 TMPRSS5Q9H3S3 457 aa6.07□□□□□ -1.44
SMG6-216ENST00000575176 NOP10Q9NPE3 64 aaKnown RBP6.07□□□□□ -1.44
SMG6-216ENST00000575176 C11orf21Q9P2W6 132 aa6.07□□□□□ -1.44
SMG6-216ENST00000575176 LENEPQ9Y5L5 61 aa6.07□□□□□ -1.44
SMG6-216ENST00000575176 LRP1BQ9NZR2 4599 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 CTXND1A0A1B0GTU2 59 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 PGPA6NDG6 321 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms