RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 TMED6Q8WW62 240 aa9.26□□□□□ -0.93
TRAPPC1-206ENST00000573989 C20orf144Q9BQM9 153 aa9.26□□□□□ -0.93
TRAPPC1-206ENST00000573989 X6R8D5 127 aa9.26□□□□□ -0.93
TRAPPC1-206ENST00000573989 TRAV12-2A0A075B6T6 113 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 IGKV2-40A0A087WW87 121 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 IGHV4-28A0A0C4DH34 117 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 A0A1W2PRE2 83 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 TMEM189A5PLL7 270 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 DIRC3C9JPN6 131 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 TEX46H3BTG2 121 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 CRXO43186 299 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 IGKV2D-40P01614 121 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 ZNF138P52744 262 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 ERCC8Q13216 396 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 RRN3P1Q2M238 152 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 C9orf62Q8N4C0 152 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 Q8NAQ8 132 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 C5orf17Q8NAS9 161 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 AGPAT4-IT1Q9H0P7 198 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 RPH3ALQ9UNE2 315 aa9.25□□□□□ -0.93
TRAPPC1-206ENST00000573989 TRBV7-9A0A0J9YWB2 115 aa9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 NMBP08949 121 aa9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 H2AFB1P0C5Y9 115 aa9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 FGF8P55075 233 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 SUMO1P63165 101 aaKnown RBP9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 CD300CQ08708 224 aa9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 C1orf158Q8N1D5 194 aa9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 SFT2D1Q8WV19 159 aa9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 LINC01587Q99440 93 aa9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 VGLL1Q99990 258 aa9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 NIPSNAP3BQ9BS92 247 aa9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 ZNF492Q9P255 531 aa9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 LENEPQ9Y5L5 61 aa9.24□□□□□ -0.93
TRAPPC1-206ENST00000573989 H7BYZ3 331 aa9.23□□□□□ -0.93
TRAPPC1-206ENST00000573989 GPX1P07203 203 aa9.23□□□□□ -0.93
TRAPPC1-206ENST00000573989 FHITP49789 147 aa9.23□□□□□ -0.93
TRAPPC1-206ENST00000573989 PPT1P50897 306 aa9.23□□□□□ -0.93
TRAPPC1-206ENST00000573989 GOLT1AQ6ZVE7 132 aa9.23□□□□□ -0.93
TRAPPC1-206ENST00000573989 C11orf45Q8TAV5 145 aa9.23□□□□□ -0.93
TRAPPC1-206ENST00000573989 MBD3L1Q8WWY6 194 aa9.23□□□□□ -0.93
TRAPPC1-206ENST00000573989 TMPRSS5Q9H3S3 457 aa9.23□□□□□ -0.93
TRAPPC1-206ENST00000573989 TEX48A0A1B0GUV7 120 aa9.22□□□□□ -0.93
TRAPPC1-206ENST00000573989 FBLL1A6NHQ2 334 aaKnown RBP9.22□□□□□ -0.93
TRAPPC1-206ENST00000573989 J3KRW8 73 aa9.22□□□□□ -0.93
TRAPPC1-206ENST00000573989 DEFB4AO15263 64 aa9.22□□□□□ -0.93
TRAPPC1-206ENST00000573989 IFNA7P01567 189 aa9.22□□□□□ -0.93
TRAPPC1-206ENST00000573989 CRISP2P16562 243 aa9.22□□□□□ -0.93
TRAPPC1-206ENST00000573989 SULT1A2P50226 295 aa9.22□□□□□ -0.93
TRAPPC1-206ENST00000573989 TAS2R60P59551 318 aa9.22□□□□□ -0.93
TRAPPC1-206ENST00000573989 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
TRAPPC1-206ENST00000573989 ARL2-SNX15V9GYD0 113 aa9.22□□□□□ -0.93
TRAPPC1-206ENST00000573989 TRAV12-3A0A0B4J271 114 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 LOC102723971A0A1B0GUV8 181 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 C7orf71A4D174 169 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 CXorf65A6NEN9 183 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 KLLNB2CW77 178 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 F6UZH7 168 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 TCRAP04437 139 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 RBMY1A1P0DJD3 496 aaKnown RBP9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 RBMY1CP0DJD4 496 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 UBE2G2P60604 165 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 RBMY1FQ15415 496 aaKnown RBP9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 CCDC28AQ8IWP9 274 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 FAM19A4Q96LR4 140 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 ATG101Q9BSB4 218 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 NDFIP1Q9BT67 221 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 PLA2G2EQ9NZK7 142 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 EPDR1Q9UM22 224 aa9.21□□□□□ -0.94
TRAPPC1-206ENST00000573989 FAM74A7A6NL05 159 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 GGTLC3B5MD39 225 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 HTN1P15515 57 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 RNASE4P34096 147 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 EMP1P54849 157 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 GNG5P63218 68 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 CST9LP1Q5W188 147 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 ZNF493Q6ZR52 646 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 CYB561D1Q8N8Q1 229 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 HIST1H2BAQ96A08 127 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 C16orf74Q96GX8 76 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 PYGO2Q9BRQ0 406 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 TCEAL7Q9BRU2 100 aa9.2□□□□□ -0.94
TRAPPC1-206ENST00000573989 ZNF705GA8MUZ8 300 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC1-206ENST00000573989 SPART-AS1P0CW21 52 aa9.19□□□□□ -0.94
TRAPPC1-206ENST00000573989 NKX2-5P52952 324 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC1-206ENST00000573989 KIR3DS1Q14943 382 aa9.19□□□□□ -0.94
TRAPPC1-206ENST00000573989 CASC10Q5T4H9 136 aa9.19□□□□□ -0.94
TRAPPC1-206ENST00000573989 TMEM75Q8N9X5 138 aa9.19□□□□□ -0.94
TRAPPC1-206ENST00000573989 Q8TAT8 98 aa9.19□□□□□ -0.94
TRAPPC1-206ENST00000573989 YTHDF2Q9Y5A9 579 aaKnown RBP9.19□□□□□ -0.94
TRAPPC1-206ENST00000573989 TRAV1-1A0A0B4J248 108 aa9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 A0A1B0GV50 99 aa9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 NUPR2A6NF83 97 aa9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 C11orf94C9JXX5 98 aa9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 RGS13O14921 159 aa9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 NANOS2P60321 138 aaKnown RBP9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 FLI1Q01543 452 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 BTN1A1Q13410 526 aa9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 PMS2P11Q13670 270 aa9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 ZFAND6Q6FIF0 208 aa9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 ZFAND2AQ8N6M9 145 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms