RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 IGKV2D-40P01614 121 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-208ENST00000571043 HLA-DQA1P01909 254 aa13.23□□□□□ -0.29
RPAIN-208ENST00000571043 ELANEP08246 267 aa13.23□□□□□ -0.29
RPAIN-208ENST00000571043 FOXE3Q13461 319 aa13.23□□□□□ -0.29
RPAIN-208ENST00000571043 LCNL1Q6ZST4 164 aa13.23□□□□□ -0.29
RPAIN-208ENST00000571043 IGHV3OR16-13A0A075B7E8 117 aa13.22□□□□□ -0.29
RPAIN-208ENST00000571043 IGHV3-49A0A0A0MS15 119 aa13.22□□□□□ -0.29
RPAIN-208ENST00000571043 IGHV3-74A0A0B4J1X5 117 aa13.22□□□□□ -0.29
RPAIN-208ENST00000571043 SPINK4O60575 86 aa13.22□□□□□ -0.29
RPAIN-208ENST00000571043 NDUFA7O95182 113 aa13.22□□□□□ -0.29
RPAIN-208ENST00000571043 FRMD6-AS1P0C7T7 363 aa13.22□□□□□ -0.29
RPAIN-208ENST00000571043 CT45A10P0DMU9 189 aa13.22□□□□□ -0.29
RPAIN-208ENST00000571043 HLA-DMBP28068 263 aa13.22□□□□□ -0.29
RPAIN-208ENST00000571043 GFI1BQ5VTD9 330 aa13.22□□□□□ -0.29
RPAIN-208ENST00000571043 MRPL54Q6P161 138 aaKnown RBP13.22□□□□□ -0.29
RPAIN-208ENST00000571043 TRAV8-2A0A0B4J237 113 aa13.21□□□□□ -0.29
RPAIN-208ENST00000571043 K7EMT4 169 aa13.21□□□□□ -0.29
RPAIN-208ENST00000571043 SMIM6P0DI80 62 aa13.21□□□□□ -0.29
RPAIN-208ENST00000571043 S100A2P29034 98 aa13.21□□□□□ -0.29
RPAIN-208ENST00000571043 IGFL4Q6B9Z1 124 aa13.21□□□□□ -0.29
RPAIN-208ENST00000571043 C8orf86Q6ZUL3 223 aa13.21□□□□□ -0.29
RPAIN-208ENST00000571043 PRIMA1Q86XR5 153 aa13.21□□□□□ -0.29
RPAIN-208ENST00000571043 GPHB5Q86YW7 130 aa13.21□□□□□ -0.29
RPAIN-208ENST00000571043 PRR25Q96S07 402 aa13.21□□□□□ -0.29
RPAIN-208ENST00000571043 GPR61Q9BZJ8 451 aa13.21□□□□□ -0.29
RPAIN-208ENST00000571043 CRIP1P50238 77 aa13.2□□□□□ -0.3
RPAIN-208ENST00000571043 FOXA3P55318 350 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-208ENST00000571043 FAM106AQ4KMX7 169 aa13.2□□□□□ -0.3
RPAIN-208ENST00000571043 LURAP1LQ8IV03 231 aa13.2□□□□□ -0.3
RPAIN-208ENST00000571043 OR2D3Q8NGH3 330 aa13.2□□□□□ -0.3
RPAIN-208ENST00000571043 MYOZ3Q8TDC0 251 aa13.2□□□□□ -0.3
RPAIN-208ENST00000571043 IGHV7-4-1A0A0J9YVY3 117 aa13.19□□□□□ -0.3
RPAIN-208ENST00000571043 A0A1B0GXF2 115 aa13.19□□□□□ -0.3
RPAIN-208ENST00000571043 ZNF705FA8MVS1 300 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-208ENST00000571043 RBPMS2Q6ZRY4 209 aaKnown RBP13.19□□□□□ -0.3
RPAIN-208ENST00000571043 TCF24Q7RTU0 167 aa13.19□□□□□ -0.3
RPAIN-208ENST00000571043 RNF152Q8N8N0 203 aa13.19□□□□□ -0.3
RPAIN-208ENST00000571043 LINC01006Q8NI28 216 aa13.19□□□□□ -0.3
RPAIN-208ENST00000571043 GTSF1Q8WW33 167 aa13.19□□□□□ -0.3
RPAIN-208ENST00000571043 C12orf57Q99622 126 aa13.19□□□□□ -0.3
RPAIN-208ENST00000571043 VGLL1Q99990 258 aa13.19□□□□□ -0.3
RPAIN-208ENST00000571043 DAZ1Q9NQZ3 744 aaKnown RBP13.19□□□□□ -0.3
RPAIN-208ENST00000571043 C8orf49Q96NF6 230 aa13.18□□□□□ -0.3
RPAIN-208ENST00000571043 NDFIP1Q9BT67 221 aa13.18□□□□□ -0.3
RPAIN-208ENST00000571043 RAB4BP61018 213 aa13.18□□□□□ -0.3
RPAIN-208ENST00000571043 PDZD11Q5EBL8 140 aa13.18□□□□□ -0.3
RPAIN-208ENST00000571043 FAM162BQ5T6X4 162 aa13.18□□□□□ -0.3
RPAIN-208ENST00000571043 C10orf99Q6UWK7 81 aa13.18□□□□□ -0.3
RPAIN-208ENST00000571043 RNF182Q8N6D2 247 aa13.18□□□□□ -0.3
RPAIN-208ENST00000571043 UFC1Q9Y3C8 167 aa13.18□□□□□ -0.3
RPAIN-208ENST00000571043 PRAC2D3DTV9 90 aa13.17□□□□□ -0.3
RPAIN-208ENST00000571043 APCSP02743 223 aa13.17□□□□□ -0.3
RPAIN-208ENST00000571043 RPLP1P05386 114 aaKnown RBP13.17□□□□□ -0.3
RPAIN-208ENST00000571043 CRISP2P16562 243 aa13.17□□□□□ -0.3
RPAIN-208ENST00000571043 BMI1P35226 326 aa13.17□□□□□ -0.3
RPAIN-208ENST00000571043 Q0VG73 95 aa13.17□□□□□ -0.3
RPAIN-208ENST00000571043 C16orf92Q96LL3 132 aa13.17□□□□□ -0.3
RPAIN-208ENST00000571043 HIST1H2BLQ99880 126 aa13.17□□□□□ -0.3
RPAIN-208ENST00000571043 ASCL2Q99929 193 aa13.17□□□□□ -0.3
RPAIN-208ENST00000571043 RHPN1-AS1Q9BWJ2 59 aa13.17□□□□□ -0.3
RPAIN-208ENST00000571043 SMPXQ9UHP9 88 aa13.17□□□□□ -0.3
RPAIN-208ENST00000571043 SH2D1AO60880 128 aa13.16□□□□□ -0.3
RPAIN-208ENST00000571043 LGALS1P09382 135 aaKnown RBP13.16□□□□□ -0.3
RPAIN-208ENST00000571043 PRB4P10163 310 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-208ENST00000571043 HBBP68871 147 aa13.16□□□□□ -0.3
RPAIN-208ENST00000571043 Q6AWC8 147 aa13.16□□□□□ -0.3
RPAIN-208ENST00000571043 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-208ENST00000571043 PGLYRP4Q96LB8 373 aa13.16□□□□□ -0.3
RPAIN-208ENST00000571043 UBE2E2Q96LR5 201 aa13.16□□□□□ -0.3
RPAIN-208ENST00000571043 PPP1R14DQ9NXH3 145 aa13.16□□□□□ -0.3
RPAIN-208ENST00000571043 SOCS3O14543 225 aa13.15□□□□□ -0.3
RPAIN-208ENST00000571043 FABP4P15090 132 aa13.15□□□□□ -0.3
RPAIN-208ENST00000571043 TM4SF20Q53R12 229 aa13.15□□□□□ -0.3
RPAIN-208ENST00000571043 OR10D4PQ8NGN7 298 aa13.15□□□□□ -0.3
RPAIN-208ENST00000571043 Q8TAT8 98 aa13.15□□□□□ -0.3
RPAIN-208ENST00000571043 FBN1P35555 2871 aaKnown RBP13.14□□□□□ -0.31
RPAIN-208ENST00000571043 A0A1B0GUS0 222 aa13.14□□□□□ -0.31
RPAIN-208ENST00000571043 ERCC8Q13216 396 aa13.14□□□□□ -0.31
RPAIN-208ENST00000571043 GDF5OSQ5U4N7 250 aa13.14□□□□□ -0.31
RPAIN-208ENST00000571043 C9orf47Q6ZRZ4 202 aa13.14□□□□□ -0.31
RPAIN-208ENST00000571043 NRN1Q9NPD7 142 aa13.14□□□□□ -0.31
RPAIN-208ENST00000571043 RNF114Q9Y508 228 aa13.14□□□□□ -0.31
RPAIN-208ENST00000571043 TMEM189A5PLL7 270 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 A8MWP6 167 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 HAX1O00165 279 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 AMBPP02760 352 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 RPS20P60866 119 aaKnown RBP13.13□□□□□ -0.31
RPAIN-208ENST00000571043 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 SAMD13Q5VXD3 122 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 REC114Q7Z4M0 266 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 TMEM18Q96B42 140 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 PACRGQ96M98 296 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-208ENST00000571043 AGPAT4-IT1Q9H0P7 198 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 A0A1B0GW15 77 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 GRIFINA4D1Z8 144 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 GZMBP10144 247 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 ESDP10768 282 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 ZNF138P52744 262 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 PROK1P58294 105 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 TMEM78Q5T7P6 136 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms